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The map label for this gene is 78358810

Identifier: 78358810

GI number: 78358810

Start: 3716205

End: 3716831

Strand: Reverse

Name: 78358810

Synonym: Dde_3772

Alternate gene names: NA

Gene position: 3716831-3716205 (Counterclockwise)

Preceding gene: 78358811

Following gene: 78358809

Centisome position: 99.64

GC content: 54.23

Gene sequence:

>627_bases
ATGAAAGATAGCTACGATAACATCGACGAGTACATCGCCGATTTGCAGGCTGCAATCAAGGACAATGCCGACTGCGCAAA
CCACCACTACAATCTCGGCGTTGCCCTGCTTTCCAAGCGCGACTGGGCCGCAGCGGAGCAGTCGTTCCGCGAGTGCGTGC
GTAACTCGCCGCGCTTTGCCGAAGCCTTTGTGCAGCTTGGCGGCATATGCCTGCAGCGTGGCGATCTGGACGGATGTATG
CGCTACAACGAAGAAGCTGCCCAGTGCAGGGCTAAGTTCCCTGTACCGTGGGCTAACATAGCTTTTGTCCACCTGCAGCG
CGGTGAACCCGAACCGGCAATCGCGGCCCTGAAAAAAGCCCTGAAGTGGGATCCTGACTTTGTACAGGCAAAGGCGACTC
TGGCCACAGCCTACTTTATGATGGAAGACTACGACATGGTACTGGATGTGTGTAAGCAGATCATCCAGAAAGAGCCTTCG
TTTGCTCCTGCATATAACAACATGGCTCTCGCATACTTTGAAAAAGGTGAGTTTGCCAAAGCTGTGCAGTATGCCGATGA
AGCACAGAAGCTCGGCTTTGAAGTGGCTCCCCAGTTTCTTGAAGAACTGAAGCCCCACCGCAGCTAG

Upstream 100 bases:

>100_bases
TGCGCTCTGGGCATAATCAACCGAGACGAGAAGTACCGGGGCATTTTTGAATTTTGCGTCTGGTATCATAACTTGTTGGA
AAAAGAGGGGTTTACGGACT

Downstream 100 bases:

>100_bases
TTTTTGCAGATAGCCAAAAATGCCGCGCCGGAAGGTTTACCTTTCCGGCGCTTTTTTGTGCCCGGTCCGGCATATCCTGT
ATTTTTGCGCAAGAGGATGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Peptidase; TPR Domain-Containing Protein; Tetratricopeptide Repeat Family; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Selenocysteine Protein; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKDSYDNIDEYIADLQAAIKDNADCANHHYNLGVALLSKRDWAAAEQSFRECVRNSPRFAEAFVQLGGICLQRGDLDGCM
RYNEEAAQCRAKFPVPWANIAFVHLQRGEPEPAIAALKKALKWDPDFVQAKATLATAYFMMEDYDMVLDVCKQIIQKEPS
FAPAYNNMALAYFEKGEFAKAVQYADEAQKLGFEVAPQFLEELKPHRS

Sequences:

>Translated_208_residues
MKDSYDNIDEYIADLQAAIKDNADCANHHYNLGVALLSKRDWAAAEQSFRECVRNSPRFAEAFVQLGGICLQRGDLDGCM
RYNEEAAQCRAKFPVPWANIAFVHLQRGEPEPAIAALKKALKWDPDFVQAKATLATAYFMMEDYDMVLDVCKQIIQKEPS
FAPAYNNMALAYFEKGEFAKAVQYADEAQKLGFEVAPQFLEELKPHRS
>Mature_208_residues
MKDSYDNIDEYIADLQAAIKDNADCANHHYNLGVALLSKRDWAAAEQSFRECVRNSPRFAEAFVQLGGICLQRGDLDGCM
RYNEEAAQCRAKFPVPWANIAFVHLQRGEPEPAIAALKKALKWDPDFVQAKATLATAYFMMEDYDMVLDVCKQIIQKEPS
FAPAYNNMALAYFEKGEFAKAVQYADEAQKLGFEVAPQFLEELKPHRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=184, Percent_Identity=26.6304347826087, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI32307148, Length=184, Percent_Identity=26.6304347826087, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23528; Mature: 23528

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSYDNIDEYIADLQAAIKDNADCANHHYNLGVALLSKRDWAAAEQSFRECVRNSPRFA
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
EAFVQLGGICLQRGDLDGCMRYNEEAAQCRAKFPVPWANIAFVHLQRGEPEPAIAALKKA
HHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHH
LKWDPDFVQAKATLATAYFMMEDYDMVLDVCKQIIQKEPSFAPAYNNMALAYFEKGEFAK
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHH
AVQYADEAQKLGFEVAPQFLEELKPHRS
HHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKDSYDNIDEYIADLQAAIKDNADCANHHYNLGVALLSKRDWAAAEQSFRECVRNSPRFA
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
EAFVQLGGICLQRGDLDGCMRYNEEAAQCRAKFPVPWANIAFVHLQRGEPEPAIAALKKA
HHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHH
LKWDPDFVQAKATLATAYFMMEDYDMVLDVCKQIIQKEPSFAPAYNNMALAYFEKGEFAK
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHH
AVQYADEAQKLGFEVAPQFLEELKPHRS
HHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA