| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358809
Identifier: 78358809
GI number: 78358809
Start: 3715464
End: 3716201
Strand: Reverse
Name: 78358809
Synonym: Dde_3771
Alternate gene names: NA
Gene position: 3716201-3715464 (Counterclockwise)
Preceding gene: 78358810
Following gene: 78358808
Centisome position: 99.62
GC content: 61.52
Gene sequence:
>738_bases TTGCAGATAGCCAAAAATGCCGCGCCGGAAGGTTTACCTTTCCGGCGCTTTTTTGTGCCCGGTCCGGCATATCCTGTATT TTTGCGCAAGAGGATGCCTCCGGCGGGCAAGGGGAATGATTCCCCTTGCATCCCCCGTTGCGCCACAGGTGGTCCGGTCA GCTGTCGCTTTCGGGCGTACAGGGCGGCTCGTTATGCGCGGAGCAGTGCAGTACAGCGCGCTGCAGGCGTATCTATGAAC GATGCGATGCGCGCATTGAGGGTGCAGGGAGATCATCTCCCTGCCCGCCGGAGGCTGTTATGTTTCAGGGTTTGTATGTC TCCGACGGGCAAGGGGACTGATTCCCCTTGCATCCCCCGTTGCGCCACAGGTGGTCCGGTCAGCTGTCGCCTTCGGGCGT ACGGGGCGGCTCGTTATGCGCGGAGCAGCGCAGTACAGCGCGCTGCAGGCGTATCTATGAACGATGCGCTGCGCGTATTG AGGGTGCAGGGAGATCATCTCCCTGCCCGCCGGAGGCTGTTATGTTTCAGGGTTTGTATGTCTCCGACGGGCAAGGGGAC TGATTCCCCTTGCATCCCCCGTTGCGCCACAGGTGGTCCGGTCAGCTGTGCGCTTTCGGGCGTACGAGGCGGCTCGTTAT GCGCGGAGCAGTGCAGTACATCGCGCTGCAGGCATGTCTATGAACGATGCGATGCGCGCATTGAGGGTGCAGGGAGATCA TCTCCCTGCCCGCCGTAG
Upstream 100 bases:
>100_bases GTTTGCCAAAGCTGTGCAGTATGCCGATGAAGCACAGAAGCTCGGCTTTGAAGTGGCTCCCCAGTTTCTTGAAGAACTGA AGCCCCACCGCAGCTAGTTT
Downstream 100 bases:
>100_bases GCTGTTTTGTTTCAGGTTTTGTATGTCTCCGGCGGGCAAGGGGACTGATTTCTCTTGCATCCCCCGTTGCGCCACAGGTG GTCCGGTCAGCTGTCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MQIAKNAAPEGLPFRRFFVPGPAYPVFLRKRMPPAGKGNDSPCIPRCATGGPVSCRFRAYRAARYARSSAVQRAAGVSMN DAMRALRVQGDHLPARRRLLCFRVCMSPTGKGTDSPCIPRCATGGPVSCRLRAYGAARYARSSAVQRAAGVSMNDALRVL RVQGDHLPARRRLLCFRVCMSPTGKGTDSPCIPRCATGGPVSCALSGVRGGSLCAEQCSTSRCRHVYERCDARIEGAGRS SPCPP
Sequences:
>Translated_245_residues MQIAKNAAPEGLPFRRFFVPGPAYPVFLRKRMPPAGKGNDSPCIPRCATGGPVSCRFRAYRAARYARSSAVQRAAGVSMN DAMRALRVQGDHLPARRRLLCFRVCMSPTGKGTDSPCIPRCATGGPVSCRLRAYGAARYARSSAVQRAAGVSMNDALRVL RVQGDHLPARRRLLCFRVCMSPTGKGTDSPCIPRCATGGPVSCALSGVRGGSLCAEQCSTSRCRHVYERCDARIEGAGRS SPCPP >Mature_245_residues MQIAKNAAPEGLPFRRFFVPGPAYPVFLRKRMPPAGKGNDSPCIPRCATGGPVSCRFRAYRAARYARSSAVQRAAGVSMN DAMRALRVQGDHLPARRRLLCFRVCMSPTGKGTDSPCIPRCATGGPVSCRLRAYGAARYARSSAVQRAAGVSMNDALRVL RVQGDHLPARRRLLCFRVCMSPTGKGTDSPCIPRCATGGPVSCALSGVRGGSLCAEQCSTSRCRHVYERCDARIEGAGRS SPCPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26233; Mature: 26233
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIAKNAAPEGLPFRRFFVPGPAYPVFLRKRMPPAGKGNDSPCIPRCATGGPVSCRFRAY CCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RAARYARSSAVQRAAGVSMNDAMRALRVQGDHLPARRRLLCFRVCMSPTGKGTDSPCIPR HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC CATGGPVSCRLRAYGAARYARSSAVQRAAGVSMNDALRVLRVQGDHLPARRRLLCFRVCM CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCHHHHHHHHHHHH SPTGKGTDSPCIPRCATGGPVSCALSGVRGGSLCAEQCSTSRCRHVYERCDARIEGAGRS CCCCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCC SPCPP CCCCC >Mature Secondary Structure MQIAKNAAPEGLPFRRFFVPGPAYPVFLRKRMPPAGKGNDSPCIPRCATGGPVSCRFRAY CCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RAARYARSSAVQRAAGVSMNDAMRALRVQGDHLPARRRLLCFRVCMSPTGKGTDSPCIPR HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC CATGGPVSCRLRAYGAARYARSSAVQRAAGVSMNDALRVLRVQGDHLPARRRLLCFRVCM CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCHHHHHHHHHHHH SPTGKGTDSPCIPRCATGGPVSCALSGVRGGSLCAEQCSTSRCRHVYERCDARIEGAGRS CCCCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCC SPCPP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA