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The map label for this gene is ycdQ [C]

Identifier: 78358651

GI number: 78358651

Start: 3571830

End: 3572879

Strand: Direct

Name: ycdQ [C]

Synonym: Dde_3612

Alternate gene names: 78358651

Gene position: 3571830-3572879 (Clockwise)

Preceding gene: 78358650

Following gene: 78358652

Centisome position: 95.75

GC content: 65.9

Gene sequence:

>1050_bases
ATGTTTTCAGACTCCCCGCCGGCAGTCACCGTTCTCATGCCCGTATACAATGCGGCGGGCCTGCTGCGTCAGGACGCCAG
CGCTCTGGAAGCAGCGGTGCACAGCGTGCTGTGCCAGCAGTTTCACAGCTTTGAGCTGCTGGCCGTGGATGACGGTTCCA
CAGACGGCACGGCCGGGGTTCTGCACCGTCTGGCCGCGCAGGATCAGCGCATGCGGGTACTGCATGTGAGCCATGGCGGC
ATTGTGTCCGCCCTCAACGCCGGACTTGCCGCAGCGCGCGGCAGGTACATTGCCCGCATGGACGCGGACGACATCTGCCA
CCCCCACAGGCTGACACTGCAGGCGGCGCATCTGGACAGTCATCCGGAAACAGGCCTTGTGGCCTGCCGCGTCCGCTTTG
CGGGCGACCGTGCAGCCTGCGGCGGGTATGCCCGCTATGTAGACTGGACAAATACCCTGCTCTCGTCGCAGGACATCGCG
CTGGGGCGCTTCCGCGAGTCGCCCTTCGCCCATCCTTCCGTCATGTTCCGCGCGTCAACGGTGCATGCCCACGGCGCCTA
TGCGGACGGCCCTTTTCCAGAAGACTACGAGCTATGGCTGCGCTGGCTCGAATGCGGCGTACGCATGGCCAAACTGCCCC
AGACCCTGCTGGACTGGTACGACCCGCCCACCCGGCTTTCGCGCACCCACGGCAACTACGGCACCGACAACTTCTACCGG
CTGAAAACACGGTATCTCGCCCGCTGGCTGGCGGCCCGCAATCCGCACCACCCGCATGTGACCGTCATCGGCGCCGGCAG
GACAAGCCGTCGCAGGGCAGCCCTGCTGCGCGAACACGGCATTGTCATCGACCGCTGGATTGATGTGGACCCGCGCAAAA
TCGGCAATGTGGTGGACGGTGCCCGCGTGCACGGCAGAGACGCCCTGCCGGAAGCCGGCAGGGGGTTCAGCCTTGCCTAT
CTCGCCGGACACGGCGCCGCGGAAGAGCTGGTGCCCTTTCTGGAAAGCACGGGCCGCCGCAACGGCACAGACTTCCTGCT
GGCATCCTGA

Upstream 100 bases:

>100_bases
GGGCCGCATCCGGCGGTCCGCGGCATATATATGCGGCAACCGGCAGACACCCCGGACAACACAGCCGGCCACGCAATCCG
GCAGAAAAAGAGCACACACC

Downstream 100 bases:

>100_bases
CCCCCGCCATCCCCGCCGGTCAGCCGCCCCCTGCCTCAGCCCCTTCATCAGGCTCGGGCACCGCCGCGGAATCCGGCAAG
GCCATACCCGCCGCCGCGGT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MFSDSPPAVTVLMPVYNAAGLLRQDASALEAAVHSVLCQQFHSFELLAVDDGSTDGTAGVLHRLAAQDQRMRVLHVSHGG
IVSALNAGLAAARGRYIARMDADDICHPHRLTLQAAHLDSHPETGLVACRVRFAGDRAACGGYARYVDWTNTLLSSQDIA
LGRFRESPFAHPSVMFRASTVHAHGAYADGPFPEDYELWLRWLECGVRMAKLPQTLLDWYDPPTRLSRTHGNYGTDNFYR
LKTRYLARWLAARNPHHPHVTVIGAGRTSRRRAALLREHGIVIDRWIDVDPRKIGNVVDGARVHGRDALPEAGRGFSLAY
LAGHGAAEELVPFLESTGRRNGTDFLLAS

Sequences:

>Translated_349_residues
MFSDSPPAVTVLMPVYNAAGLLRQDASALEAAVHSVLCQQFHSFELLAVDDGSTDGTAGVLHRLAAQDQRMRVLHVSHGG
IVSALNAGLAAARGRYIARMDADDICHPHRLTLQAAHLDSHPETGLVACRVRFAGDRAACGGYARYVDWTNTLLSSQDIA
LGRFRESPFAHPSVMFRASTVHAHGAYADGPFPEDYELWLRWLECGVRMAKLPQTLLDWYDPPTRLSRTHGNYGTDNFYR
LKTRYLARWLAARNPHHPHVTVIGAGRTSRRRAALLREHGIVIDRWIDVDPRKIGNVVDGARVHGRDALPEAGRGFSLAY
LAGHGAAEELVPFLESTGRRNGTDFLLAS
>Mature_349_residues
MFSDSPPAVTVLMPVYNAAGLLRQDASALEAAVHSVLCQQFHSFELLAVDDGSTDGTAGVLHRLAAQDQRMRVLHVSHGG
IVSALNAGLAAARGRYIARMDADDICHPHRLTLQAAHLDSHPETGLVACRVRFAGDRAACGGYARYVDWTNTLLSSQDIA
LGRFRESPFAHPSVMFRASTVHAHGAYADGPFPEDYELWLRWLECGVRMAKLPQTLLDWYDPPTRLSRTHGNYGTDNFYR
LKTRYLARWLAARNPHHPHVTVIGAGRTSRRRAALLREHGIVIDRWIDVDPRKIGNVVDGARVHGRDALPEAGRGFSLAY
LAGHGAAEELVPFLESTGRRNGTDFLLAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=98, Percent_Identity=34.6938775510204, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1790044, Length=105, Percent_Identity=30.4761904761905, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI212640903, Length=307, Percent_Identity=25.0814332247557, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 38409; Mature: 38409

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDSPPAVTVLMPVYNAAGLLRQDASALEAAVHSVLCQQFHSFELLAVDDGSTDGTAGV
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHH
LHRLAAQDQRMRVLHVSHGGIVSALNAGLAAARGRYIARMDADDICHPHRLTLQAAHLDS
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEECCCC
HPETGLVACRVRFAGDRAACGGYARYVDWTNTLLSSQDIALGRFRESPFAHPSVMFRAST
CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEE
VHAHGAYADGPFPEDYELWLRWLECGVRMAKLPQTLLDWYDPPTRLSRTHGNYGTDNFYR
EEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHH
LKTRYLARWLAARNPHHPHVTVIGAGRTSRRRAALLREHGIVIDRWIDVDPRKIGNVVDG
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCHHHHCCHHCC
ARVHGRDALPEAGRGFSLAYLAGHGAAEELVPFLESTGRRNGTDFLLAS
CEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MFSDSPPAVTVLMPVYNAAGLLRQDASALEAAVHSVLCQQFHSFELLAVDDGSTDGTAGV
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHH
LHRLAAQDQRMRVLHVSHGGIVSALNAGLAAARGRYIARMDADDICHPHRLTLQAAHLDS
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEECCCC
HPETGLVACRVRFAGDRAACGGYARYVDWTNTLLSSQDIALGRFRESPFAHPSVMFRAST
CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEE
VHAHGAYADGPFPEDYELWLRWLECGVRMAKLPQTLLDWYDPPTRLSRTHGNYGTDNFYR
EEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHH
LKTRYLARWLAARNPHHPHVTVIGAGRTSRRRAALLREHGIVIDRWIDVDPRKIGNVVDG
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCHHHHCCHHCC
ARVHGRDALPEAGRGFSLAYLAGHGAAEELVPFLESTGRRNGTDFLLAS
CEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]