| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358601
Identifier: 78358601
GI number: 78358601
Start: 3521662
End: 3522114
Strand: Direct
Name: 78358601
Synonym: Dde_3562
Alternate gene names: NA
Gene position: 3521662-3522114 (Clockwise)
Preceding gene: 78358600
Following gene: 78358602
Centisome position: 94.41
GC content: 59.38
Gene sequence:
>453_bases ATGGACACCAGAGAGATTGTGCAGATTCCGTGCAGCGCAGACACTCTTGCCGTCTGGAAAGCGTTTCTGAGCGCCCTCAG CGACAGTAACATGAGCGTCTTTGCCGTGTTTGACCACAAACAGAACGCGGAAGACGCCGGTCTGACCATGCCGGAGACAA AAGTAGTGGTGTTCGGCAACCCTGCCGCGGGCACACCGCTTATGAATCAGGCCCCCACACTGGCGCTGGAACTGCCGCTG AAGGTTCTTGTGCGCGAGACGCGTTCCGGCTGTGAAATAGTCTACACGCCGTTTTCCGTCACTGCGGCACGCCACGGGCT TTCCGCCGGTCATGCAGCCCCGAATGCTCCGGACACTCAGGATACTACGGCCATCGCGCAAGCCATTGATGCCGTAGACC GGCTGCTTGCCGGTCTGGTACAACAGGCGTGCGGCTCCGCCATAACCAGATAA
Upstream 100 bases:
>100_bases GGGTATATTGCAGCAACGTGGATAAAGGTCGCTCTGTACAGCGGGGGGCCCGCAACCTGCAAATGCCGGTATACCAACGG CAACGCGAGGAAAAACAACC
Downstream 100 bases:
>100_bases CTACGGATTGATACGATGAACAGAATACCCTTGCTCTGCCTGACATTGCTGGTGGTTCTGCTGGGTGGCTGCGCAGCCGC GCAGCCGGAAGGACACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: CrcB Family Protein; Secreted Protein Containing; CrcB-Like Protein; Exported Beta-Lactamase; Glycoside Hydrolase Family; Exported Beta-Lactamase Protein; Conserved Domain Protein; Exported Protein
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MDTREIVQIPCSADTLAVWKAFLSALSDSNMSVFAVFDHKQNAEDAGLTMPETKVVVFGNPAAGTPLMNQAPTLALELPL KVLVRETRSGCEIVYTPFSVTAARHGLSAGHAAPNAPDTQDTTAIAQAIDAVDRLLAGLVQQACGSAITR
Sequences:
>Translated_150_residues MDTREIVQIPCSADTLAVWKAFLSALSDSNMSVFAVFDHKQNAEDAGLTMPETKVVVFGNPAAGTPLMNQAPTLALELPL KVLVRETRSGCEIVYTPFSVTAARHGLSAGHAAPNAPDTQDTTAIAQAIDAVDRLLAGLVQQACGSAITR >Mature_150_residues MDTREIVQIPCSADTLAVWKAFLSALSDSNMSVFAVFDHKQNAEDAGLTMPETKVVVFGNPAAGTPLMNQAPTLALELPL KVLVRETRSGCEIVYTPFSVTAARHGLSAGHAAPNAPDTQDTTAIAQAIDAVDRLLAGLVQQACGSAITR
Specific function: Unknown
COG id: COG3439
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15763; Mature: 15763
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTREIVQIPCSADTLAVWKAFLSALSDSNMSVFAVFDHKQNAEDAGLTMPETKVVVFGN CCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECC PAAGTPLMNQAPTLALELPLKVLVRETRSGCEIVYTPFSVTAARHGLSAGHAAPNAPDTQ CCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC DTTAIAQAIDAVDRLLAGLVQQACGSAITR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTREIVQIPCSADTLAVWKAFLSALSDSNMSVFAVFDHKQNAEDAGLTMPETKVVVFGN CCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECC PAAGTPLMNQAPTLALELPLKVLVRETRSGCEIVYTPFSVTAARHGLSAGHAAPNAPDTQ CCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC DTTAIAQAIDAVDRLLAGLVQQACGSAITR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA