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The map label for this gene is dcrA [H]

Identifier: 78358600

GI number: 78358600

Start: 3519368

End: 3521389

Strand: Direct

Name: dcrA [H]

Synonym: Dde_3561

Alternate gene names: 78358600

Gene position: 3519368-3521389 (Clockwise)

Preceding gene: 78358598

Following gene: 78358601

Centisome position: 94.35

GC content: 55.84

Gene sequence:

>2022_bases
ATGGCGTTAAGTGCAAAAAATAAAATTGTACTGAGTGTGTTATCTTTTTTCGCACTGGTCATCATCGCAATGGCCGCAGT
TTCATACCAGCGCTTCAGCGAATCATCGAACAAAGCCCAGCATATCAAGCTGGAAACAGTGGCCACGGCCGTGGGCAAAG
CTGTTTCGGAAAAAACCGATACATACTTCAACGCGCTGGAGCTTGCAGCGAGAATGCTTGCGCCGGTGTTAAGCCCTCAT
ACCCCCGATGACATGGAGTACAGGCTTTCAGTGCTGCACGCCCTGATGCTGCAGACAAACGTGAGCGAAGCTTATTACGG
CCTGCGCGACGGGCTGACCTACACGGCCAAGGGGCAGATACGCAACTTCAACGCAAAAGATCTGGGCCGCGAATGGTATG
TAAGAATTTTCAACGGTGAAAAAAGAATCATCACAACGCCCTACACATCCTCCATCGGCGAACTGGTCATGGCCGCCGGT
GTTCCCATAACAAAAGACGGGGCAGTGGCCGGCACGCTGTGCGCCAATCTGGCCATGAATGAAATCACAAGCTTCACCCG
GCAGGTGCTGGATTTTAAAAATGTCCTGCTCATAAGGCGCGACGGCTTCATCATGGCGGCTCCCGACGAAAAGGACATCG
GCAAAAGTCTGTGGGATGTCATTCCCGACCTGAAGAGATATCAGGGCACCACCGGAACCAGCCGGCTGTCGTTCACGCAT
GGCGGCCAGACGTATGAAGGAAGCCTGTACTACATAGACAGTCTCAACTGGAAAGTGCTGGCCTTTGAAAGCACTGCGGC
CATTGAAAAAGACTCAAAAGAGAATCTGTACCTCACCATAGGCATGGCGGTAACGGCACTGCTTCTTTCTGTGCTTATGG
TCAACCTGCTGGCTTCATTTCTCATATTCCGTCCGCTTGGCAGGGGCGTGGCATTTGCCGCCGCTGTTTCAGAAGGCAGG
CTGGATGAAACGCTGGACATCAACCGCAGCGACGAAGTGGGTGTTCTTGCCGAGGCACTGCGCACCATGGTGGCACGGCT
GAAAGAAATGATAACCGAAACGGAACAGAAAGAGCGCGCCGCCACGCAGGAGGCAGAACGCGCCCGCAAAGCTACCGAAC
AGGCCGAAGAAGCCCGCAGGGAAGCCCTGCAGGCCACAAGGCGCGGTATTCTGCAGGCCACATCGCAGATAGAGGGAGTG
GTAAAACGCATTGCCACCAACACGGAAGAACTGTCAGCACAGGCGCGCCAGATCAGCAGTGCTTCAGATATCCAGAAGGC
GCGCATGACAGAAACCGCAGCCGCCATGGAGCAGATGAACGCATCGGTCATGGAGGTTGCACGCAATTCCGGAGAGGCTG
CCTCCAATGCTTCCGCCGCCCACCGCGAAGCCGGACGCAGCGCCGAACTGGTGGACAAAGTGGCCGCAGCGGTCAACTTT
CTGCACAAGGAAACGCAGGTGATGACCACGGACCTGACAGAGCTTGGGGCACAGGCTGACGGCATCGGCATGATAATGGA
CGTCATAAACGACATAGCCGACCAGACAAACCTGCTGGCGCTTAATGCCGCCATAGAAGCCGCCCGCGCGGGCGACGCCG
GAAGAGGCTTTGCCGTGGTGGCCGATGAAGTCCGCAAACTGGCCGAAAAAACCATCGGGGCCACCAAAGAGGTGGGTGAC
AAGATTCACGCCATCCAGAACTCTTCCAGAAAAAGTATCCGCTCCATGGAATCCGCTTCGGATGCAGTGGAAGACGCCGC
AACACTGGCCGGAGAATCCGGCGAAGCCATCAAGCGGATTCTCGCCTATGCCGAGGCCAACGCCACGCAGGTGCAGTCCA
TCGCCACAGCGGCGGAAGAACAGTCCGCAGCGTCGGAACAGATAAATCAGGCTGTGGACGAGGTGGCGCACATTACTGCA
GAAACGACGCAGAGCATGGCCGAATCCACTGCGGCTCTGGAAGAGCTTGCCAAAATGTCCGGCGAGCTGCAGGTTATCGT
GGAAAATCTGAAAAAATCATAA

Upstream 100 bases:

>100_bases
TCTCCATTCCACACATACTATATGAAAGATATGCAGGCGCCTGTTGCAGCGCCTGTCCCCCGCCGGCGCACTGTGCCTGC
GGCAATCATCAGGAGCAGAC

Downstream 100 bases:

>100_bases
CCGCGCCACACAACAGACAACAGGCCGGAGGACGTTTGCCCTCCGGCCTGTTTTGTATGCGGGGTCATACTGTAAAAAAT
TATTACCTGTACCCGCACCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 673; Mature: 672

Protein sequence:

>673_residues
MALSAKNKIVLSVLSFFALVIIAMAAVSYQRFSESSNKAQHIKLETVATAVGKAVSEKTDTYFNALELAARMLAPVLSPH
TPDDMEYRLSVLHALMLQTNVSEAYYGLRDGLTYTAKGQIRNFNAKDLGREWYVRIFNGEKRIITTPYTSSIGELVMAAG
VPITKDGAVAGTLCANLAMNEITSFTRQVLDFKNVLLIRRDGFIMAAPDEKDIGKSLWDVIPDLKRYQGTTGTSRLSFTH
GGQTYEGSLYYIDSLNWKVLAFESTAAIEKDSKENLYLTIGMAVTALLLSVLMVNLLASFLIFRPLGRGVAFAAAVSEGR
LDETLDINRSDEVGVLAEALRTMVARLKEMITETEQKERAATQEAERARKATEQAEEARREALQATRRGILQATSQIEGV
VKRIATNTEELSAQARQISSASDIQKARMTETAAAMEQMNASVMEVARNSGEAASNASAAHREAGRSAELVDKVAAAVNF
LHKETQVMTTDLTELGAQADGIGMIMDVINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTIGATKEVGD
KIHAIQNSSRKSIRSMESASDAVEDAATLAGESGEAIKRILAYAEANATQVQSIATAAEEQSAASEQINQAVDEVAHITA
ETTQSMAESTAALEELAKMSGELQVIVENLKKS

Sequences:

>Translated_673_residues
MALSAKNKIVLSVLSFFALVIIAMAAVSYQRFSESSNKAQHIKLETVATAVGKAVSEKTDTYFNALELAARMLAPVLSPH
TPDDMEYRLSVLHALMLQTNVSEAYYGLRDGLTYTAKGQIRNFNAKDLGREWYVRIFNGEKRIITTPYTSSIGELVMAAG
VPITKDGAVAGTLCANLAMNEITSFTRQVLDFKNVLLIRRDGFIMAAPDEKDIGKSLWDVIPDLKRYQGTTGTSRLSFTH
GGQTYEGSLYYIDSLNWKVLAFESTAAIEKDSKENLYLTIGMAVTALLLSVLMVNLLASFLIFRPLGRGVAFAAAVSEGR
LDETLDINRSDEVGVLAEALRTMVARLKEMITETEQKERAATQEAERARKATEQAEEARREALQATRRGILQATSQIEGV
VKRIATNTEELSAQARQISSASDIQKARMTETAAAMEQMNASVMEVARNSGEAASNASAAHREAGRSAELVDKVAAAVNF
LHKETQVMTTDLTELGAQADGIGMIMDVINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTIGATKEVGD
KIHAIQNSSRKSIRSMESASDAVEDAATLAGESGEAIKRILAYAEANATQVQSIATAAEEQSAASEQINQAVDEVAHITA
ETTQSMAESTAALEELAKMSGELQVIVENLKKS
>Mature_672_residues
ALSAKNKIVLSVLSFFALVIIAMAAVSYQRFSESSNKAQHIKLETVATAVGKAVSEKTDTYFNALELAARMLAPVLSPHT
PDDMEYRLSVLHALMLQTNVSEAYYGLRDGLTYTAKGQIRNFNAKDLGREWYVRIFNGEKRIITTPYTSSIGELVMAAGV
PITKDGAVAGTLCANLAMNEITSFTRQVLDFKNVLLIRRDGFIMAAPDEKDIGKSLWDVIPDLKRYQGTTGTSRLSFTHG
GQTYEGSLYYIDSLNWKVLAFESTAAIEKDSKENLYLTIGMAVTALLLSVLMVNLLASFLIFRPLGRGVAFAAAVSEGRL
DETLDINRSDEVGVLAEALRTMVARLKEMITETEQKERAATQEAERARKATEQAEEARREALQATRRGILQATSQIEGVV
KRIATNTEELSAQARQISSASDIQKARMTETAAAMEQMNASVMEVARNSGEAASNASAAHREAGRSAELVDKVAAAVNFL
HKETQVMTTDLTELGAQADGIGMIMDVINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTIGATKEVGDK
IHAIQNSSRKSIRSMESASDAVEDAATLAGESGEAIKRILAYAEANATQVQSIATAAEEQSAASEQINQAVDEVAHITAE
TTQSMAESTAALEELAKMSGELQVIVENLKKS

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=363, Percent_Identity=29.2011019283747, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1788194, Length=254, Percent_Identity=35.0393700787402, Blast_Score=109, Evalue=6e-25,
Organism=Escherichia coli, GI1788195, Length=341, Percent_Identity=29.0322580645161, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787690, Length=261, Percent_Identity=37.1647509578544, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1789453, Length=381, Percent_Identity=28.8713910761155, Blast_Score=96, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 72626; Mature: 72495

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSAKNKIVLSVLSFFALVIIAMAAVSYQRFSESSNKAQHIKLETVATAVGKAVSEKTD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHH
TYFNALELAARMLAPVLSPHTPDDMEYRLSVLHALMLQTNVSEAYYGLRDGLTYTAKGQI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEECCCC
RNFNAKDLGREWYVRIFNGEKRIITTPYTSSIGELVMAAGVPITKDGAVAGTLCANLAMN
CCCCHHHCCHHHEEEEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
EITSFTRQVLDFKNVLLIRRDGFIMAAPDEKDIGKSLWDVIPDLKRYQGTTGTSRLSFTH
HHHHHHHHHHHHHHEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GGQTYEGSLYYIDSLNWKVLAFESTAAIEKDSKENLYLTIGMAVTALLLSVLMVNLLASF
CCCEECCCEEEEECCCEEEEEEECHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
LIFRPLGRGVAFAAAVSEGRLDETLDINRSDEVGVLAEALRTMVARLKEMITETEQKERA
HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATQEAERARKATEQAEEARREALQATRRGILQATSQIEGVVKRIATNTEELSAQARQISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ASDIQKARMTETAAAMEQMNASVMEVARNSGEAASNASAAHREAGRSAELVDKVAAAVNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
LHKETQVMTTDLTELGAQADGIGMIMDVINDIADQTNLLALNAAIEAARAGDAGRGFAVV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHH
ADEVRKLAEKTIGATKEVGDKIHAIQNSSRKSIRSMESASDAVEDAATLAGESGEAIKRI
HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAYAEANATQVQSIATAAEEQSAASEQINQAVDEVAHITAETTQSMAESTAALEELAKMS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GELQVIVENLKKS
CHHHHHHHHHHCC
>Mature Secondary Structure 
ALSAKNKIVLSVLSFFALVIIAMAAVSYQRFSESSNKAQHIKLETVATAVGKAVSEKTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHH
TYFNALELAARMLAPVLSPHTPDDMEYRLSVLHALMLQTNVSEAYYGLRDGLTYTAKGQI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEECCCC
RNFNAKDLGREWYVRIFNGEKRIITTPYTSSIGELVMAAGVPITKDGAVAGTLCANLAMN
CCCCHHHCCHHHEEEEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
EITSFTRQVLDFKNVLLIRRDGFIMAAPDEKDIGKSLWDVIPDLKRYQGTTGTSRLSFTH
HHHHHHHHHHHHHHEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GGQTYEGSLYYIDSLNWKVLAFESTAAIEKDSKENLYLTIGMAVTALLLSVLMVNLLASF
CCCEECCCEEEEECCCEEEEEEECHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
LIFRPLGRGVAFAAAVSEGRLDETLDINRSDEVGVLAEALRTMVARLKEMITETEQKERA
HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATQEAERARKATEQAEEARREALQATRRGILQATSQIEGVVKRIATNTEELSAQARQISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ASDIQKARMTETAAAMEQMNASVMEVARNSGEAASNASAAHREAGRSAELVDKVAAAVNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
LHKETQVMTTDLTELGAQADGIGMIMDVINDIADQTNLLALNAAIEAARAGDAGRGFAVV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHH
ADEVRKLAEKTIGATKEVGDKIHAIQNSSRKSIRSMESASDAVEDAATLAGESGEAIKRI
HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAYAEANATQVQSIATAAEEQSAASEQINQAVDEVAHITAETTQSMAESTAALEELAKMS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GELQVIVENLKKS
CHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]