| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358581
Identifier: 78358581
GI number: 78358581
Start: 3502469
End: 3503200
Strand: Direct
Name: 78358581
Synonym: Dde_3542
Alternate gene names: NA
Gene position: 3502469-3503200 (Clockwise)
Preceding gene: 78358580
Following gene: 78358582
Centisome position: 93.89
GC content: 67.49
Gene sequence:
>732_bases GTGACCTGCACCGGCACAGCACCGGCAGCTGCCTGCGAGCCGCTGTGGGCCCGTCCGGCCATGCGCGGAGCTTCGCCCGA TGCATGGCGCCCCGGCGGGCTGGAGCTTACCGACCGCGCCGCGGCGCTGGCAGGGGTCAAGCCCGGCTGGCGAGTGCTTG ACGCAGGCTGCGGCACCGGCGCTTCCGCCCTGCATCTGCGTCGCCGTTACGGGGCGCTGGCTGCAGGCATGGACATGCTG GCCGGCCGTCACCGGCAGGGGGATGTTCCCTGCCGCGTCGCAACAGGAGTGCCCATGGTGCGGGCCGATGCCATGCAGCC GCCTTTCATTCCGGAAAGCTTTCATATGATTCTGTGTGAATGCGTTCTTTCCCTGCTGCCGGACCCCGCCCGCGCACTGC ATATTTTCCGCAATCTGCTGCGTTCCGGGGGCACGCTGGCCGTTACCGACCTGTACCTGACCGGTCAGAAAAAACATACG CTGCCCGCCGGTTCCTGCCTTGGATGGCAGGCAACGCGCAGCGGCATTCTGGCCATGCTGCGGCAGGCCGGCTTTCTGCC TCTGTGCTTTGAGGACCATACCCCCATGCTCGGTACGCTGGCTGCCCGTCTTGTTCTGGCGGGTGAACCGCTGTGCTCTC TCAGCGCCGCGGCTGCGGGCCGGTCTGCAAACATCCCGCACACCGGAACGGGCGCAGGCTACTTTCTGCTGCTGGCCCGC AGGTCAGGCTGA
Upstream 100 bases:
>100_bases ACGTGGAACTGCCTGCCTGCGCCGCCTGCGGACTGGTGCTGATTCCCGAAGATCTGGCCACCGGTAAAATGGCGGATGTG GAAAGCCTGCTGGAGGACAA
Downstream 100 bases:
>100_bases AGACCACTCACACCTTCCACGGAGAATAACCATGCTCGACGATACATCGCTTACCATGATGCGGCTGGCAGGGCAGGGCT ACTGCTGCAGCCAGATTCTC
Product: ubiquinone/menaquinone biosynthesis methylase-like protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; MitM-Related Protein
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTCTGTAPAAACEPLWARPAMRGASPDAWRPGGLELTDRAAALAGVKPGWRVLDAGCGTGASALHLRRRYGALAAGMDML AGRHRQGDVPCRVATGVPMVRADAMQPPFIPESFHMILCECVLSLLPDPARALHIFRNLLRSGGTLAVTDLYLTGQKKHT LPAGSCLGWQATRSGILAMLRQAGFLPLCFEDHTPMLGTLAARLVLAGEPLCSLSAAAAGRSANIPHTGTGAGYFLLLAR RSG
Sequences:
>Translated_243_residues MTCTGTAPAAACEPLWARPAMRGASPDAWRPGGLELTDRAAALAGVKPGWRVLDAGCGTGASALHLRRRYGALAAGMDML AGRHRQGDVPCRVATGVPMVRADAMQPPFIPESFHMILCECVLSLLPDPARALHIFRNLLRSGGTLAVTDLYLTGQKKHT LPAGSCLGWQATRSGILAMLRQAGFLPLCFEDHTPMLGTLAARLVLAGEPLCSLSAAAAGRSANIPHTGTGAGYFLLLAR RSG >Mature_242_residues TCTGTAPAAACEPLWARPAMRGASPDAWRPGGLELTDRAAALAGVKPGWRVLDAGCGTGASALHLRRRYGALAAGMDMLA GRHRQGDVPCRVATGVPMVRADAMQPPFIPESFHMILCECVLSLLPDPARALHIFRNLLRSGGTLAVTDLYLTGQKKHTL PAGSCLGWQATRSGILAMLRQAGFLPLCFEDHTPMLGTLAARLVLAGEPLCSLSAAAAGRSANIPHTGTGAGYFLLLARR SG
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25446; Mature: 25315
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCTGTAPAAACEPLWARPAMRGASPDAWRPGGLELTDRAAALAGVKPGWRVLDAGCGTG CCCCCCCCHHHCCCHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC ASALHLRRRYGALAAGMDMLAGRHRQGDVPCRVATGVPMVRADAMQPPFIPESFHMILCE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHHH CVLSLLPDPARALHIFRNLLRSGGTLAVTDLYLTGQKKHTLPAGSCLGWQATRSGILAML HHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH RQAGFLPLCFEDHTPMLGTLAARLVLAGEPLCSLSAAAAGRSANIPHTGTGAGYFLLLAR HHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE RSG CCC >Mature Secondary Structure TCTGTAPAAACEPLWARPAMRGASPDAWRPGGLELTDRAAALAGVKPGWRVLDAGCGTG CCCCCCCHHHCCCHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC ASALHLRRRYGALAAGMDMLAGRHRQGDVPCRVATGVPMVRADAMQPPFIPESFHMILCE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHHH CVLSLLPDPARALHIFRNLLRSGGTLAVTDLYLTGQKKHTLPAGSCLGWQATRSGILAML HHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH RQAGFLPLCFEDHTPMLGTLAARLVLAGEPLCSLSAAAAGRSANIPHTGTGAGYFLLLAR HHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE RSG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA