Click here to switch to the map view.

The map label for this gene is asrB [H]

Identifier: 78358569

GI number: 78358569

Start: 3489262

End: 3490101

Strand: Direct

Name: asrB [H]

Synonym: Dde_3530

Alternate gene names: 78358569

Gene position: 3489262-3490101 (Clockwise)

Preceding gene: 78358568

Following gene: 78358570

Centisome position: 93.54

GC content: 57.98

Gene sequence:

>840_bases
ATGAATAGCCCGCAGGATAATCTGTATCTGCCCTACATGGCGACCATACAGGAAGTCGTCACCGAAACACCCGCCATCAA
AACGTTCCGCGTCAGGCTGAACGACCCCGCCGCCATGGACAACTTCCAGTTTGAACCGGGGCAGGTGGGACAGCTTTCCG
TCTTCGGCGCGGGAGAATCAACCTTTGTCATCAATTCGCCGCCCACCCGCAAAGAATACCTGCAGTTCAGCGTGATGAAG
GTGGGCGAACTGACAGGCAAACTGCACTCATTGCGTGCCGGCGACCAGATAGGTGTGCGCGCCCCGCTGGGCAACGCCTT
TCCGTACAGGCAGATGCAGGGCAAAGACATCGTTTTCATAGGGGGCGGCATCGGCATGGCACCGCTGCGCACACTGCTGC
TCTACATGCTGGACAACCGCGGAGACTACGGCAAAATAACACTGCTGTACGGCGCGCGCAGCCCTGCGGACATGGCGTTC
AGCTATGAGCTGCCGCAATGGCTGGAACGCGACGACATGCACACGGTGCTCACGGTGGACAACCCCGCCGACGAATGGCC
CCACAGAGTGGGCCTCATACCCAACATTCTGAAAGAAATGAATCCTTCGCCGCAGAATGCCGTGGCAGTCACCTGCGGAC
CGCCCATCATGATCAAGTTCACCATACAGGCGCTGCATGAACTCGGCTTTGCCGACGAGCAGATCATCACCACGCTGGAA
AAACGCATGAAGTGCGGCGTGGGCATATGCGGCCGATGCAACATCGGCACAGAATACGTCTGTCAGGACGGGCCTGTTTT
CAGCTATGCCCAGCTGAAAAAACTGCCCAACGAGCTGTAA

Upstream 100 bases:

>100_bases
TGCGGCCGGTGCATCAGCTCCTGCCCCGTAACCATGGACATCCGCCGCATCGTGCACAGTGCCATGCAGCGGGCGCAATG
CGCAACGCCGGAGCAAGCTC

Downstream 100 bases:

>100_bases
CCGCGCAACTGCCCGGAACCGCCGGCGCGGCTTCCCCGCCGGCGGTTCCTGCGCCGGGCACGGGCTGCGCCACCACAACA
GACTGCCGGGAGAACTAACC

Product: hydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNSPQDNLYLPYMATIQEVVTETPAIKTFRVRLNDPAAMDNFQFEPGQVGQLSVFGAGESTFVINSPPTRKEYLQFSVMK
VGELTGKLHSLRAGDQIGVRAPLGNAFPYRQMQGKDIVFIGGGIGMAPLRTLLLYMLDNRGDYGKITLLYGARSPADMAF
SYELPQWLERDDMHTVLTVDNPADEWPHRVGLIPNILKEMNPSPQNAVAVTCGPPIMIKFTIQALHELGFADEQIITTLE
KRMKCGVGICGRCNIGTEYVCQDGPVFSYAQLKKLPNEL

Sequences:

>Translated_279_residues
MNSPQDNLYLPYMATIQEVVTETPAIKTFRVRLNDPAAMDNFQFEPGQVGQLSVFGAGESTFVINSPPTRKEYLQFSVMK
VGELTGKLHSLRAGDQIGVRAPLGNAFPYRQMQGKDIVFIGGGIGMAPLRTLLLYMLDNRGDYGKITLLYGARSPADMAF
SYELPQWLERDDMHTVLTVDNPADEWPHRVGLIPNILKEMNPSPQNAVAVTCGPPIMIKFTIQALHELGFADEQIITTLE
KRMKCGVGICGRCNIGTEYVCQDGPVFSYAQLKKLPNEL
>Mature_279_residues
MNSPQDNLYLPYMATIQEVVTETPAIKTFRVRLNDPAAMDNFQFEPGQVGQLSVFGAGESTFVINSPPTRKEYLQFSVMK
VGELTGKLHSLRAGDQIGVRAPLGNAFPYRQMQGKDIVFIGGGIGMAPLRTLLLYMLDNRGDYGKITLLYGARSPADMAF
SYELPQWLERDDMHTVLTVDNPADEWPHRVGLIPNILKEMNPSPQNAVAVTCGPPIMIKFTIQALHELGFADEQIITTLE
KRMKCGVGICGRCNIGTEYVCQDGPVFSYAQLKKLPNEL

Specific function: This enzyme catalyzes the hydrogen sulfide production from sulfite. It is strictly anaerobic. It is regulated by electron acceptors rather than by cysteine [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938
- InterPro:   IPR014260 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30946; Mature: 30946

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPQDNLYLPYMATIQEVVTETPAIKTFRVRLNDPAAMDNFQFEPGQVGQLSVFGAGES
CCCCCCCEECCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCC
TFVINSPPTRKEYLQFSVMKVGELTGKLHSLRAGDQIGVRAPLGNAFPYRQMQGKDIVFI
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHCCCCEEEEE
GGGIGMAPLRTLLLYMLDNRGDYGKITLLYGARSPADMAFSYELPQWLERDDMHTVLTVD
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCHHHHCCCCCEEEEEEC
NPADEWPHRVGLIPNILKEMNPSPQNAVAVTCGPPIMIKFTIQALHELGFADEQIITTLE
CCHHHCCHHCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEHHHHHHCCCCHHHHHHHHH
KRMKCGVGICGRCNIGTEYVCQDGPVFSYAQLKKLPNEL
HHHHCCCCCCEECCCCCEEEECCCCEEHHHHHHHCCCCC
>Mature Secondary Structure
MNSPQDNLYLPYMATIQEVVTETPAIKTFRVRLNDPAAMDNFQFEPGQVGQLSVFGAGES
CCCCCCCEECCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCC
TFVINSPPTRKEYLQFSVMKVGELTGKLHSLRAGDQIGVRAPLGNAFPYRQMQGKDIVFI
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHCCCCEEEEE
GGGIGMAPLRTLLLYMLDNRGDYGKITLLYGARSPADMAFSYELPQWLERDDMHTVLTVD
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCHHHHCCCCCEEEEEEC
NPADEWPHRVGLIPNILKEMNPSPQNAVAVTCGPPIMIKFTIQALHELGFADEQIITTLE
CCHHHCCHHCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEHHHHHHCCCCHHHHHHHHH
KRMKCGVGICGRCNIGTEYVCQDGPVFSYAQLKKLPNEL
HHHHCCCCCCEECCCCCEEEECCCCEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1704886; 11677609 [H]