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The map label for this gene is hdrC1 [H]

Identifier: 78358563

GI number: 78358563

Start: 3483315

End: 3483872

Strand: Direct

Name: hdrC1 [H]

Synonym: Dde_3524

Alternate gene names: 78358563

Gene position: 3483315-3483872 (Clockwise)

Preceding gene: 78358562

Following gene: 78358564

Centisome position: 93.38

GC content: 59.68

Gene sequence:

>558_bases
ATGCGAGACGACCGTACCATCCGTCGTTGCGATGCCGCGTTCACACAAAGCGTGCAGCAGCAGAGCGAGCAGAACATGGC
ACTGTGCTACCAGTGCGGCAACTGCACGGCGGGGTGCCCTGTGGCACGCGCCAGCAGCACGCCGGTGACGCAGGTCATGC
GCCTTGTGCAGGCAGGTCAGCGCGAGGCCGCACTGGGGGCCGATTCCATATGGCTTTGCGCCTCATGCGAAACATGCACC
ACTCGCTGCCCCAATGATATCGACGTGGCACGCGTCATGGATGTGCTGCGTCATATGGCCCGCCGTGAAAATCATGTGGC
CGAAAAAAATATACGTGATTTCTGGGACGCCTTTCTCGAGTCCGTCGAAAAACACGGACGCGTGTACGAGGTGGGCCTCA
TGGCCGCATATGTGCGTAAAACTGGCCGGTTCTGGACCGACGCAGATCTTGCTCCGGCGGCGCTGGGCAAGGGCAAACTT
CCCCTTCGGCCGCATCCGGTGACCGACAAGGAAGCCATAAGACAAATTTTCAGACGTTACAGAGAGCGTTCGGCATGA

Upstream 100 bases:

>100_bases
GGGGAAAACCCCTTTTTTTCCCGCTGCCCTGCATATCCGCAGAACCCGCCGCCGGGGTCATCCTTGGCCCCGGCGGTAAT
CTTTCCGGAGAAATATACCC

Downstream 100 bases:

>100_bases
GCACATTCACCTACGCCTACTATCCGGGCTGCTCCGCCATGGGCACCTCGGCGGAATATGAAGCATCCACCCGCGCCCTG
TGCAGCAGGCTGGGCATAAC

Product: heterodisulfide reductase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRDDRTIRRCDAAFTQSVQQQSEQNMALCYQCGNCTAGCPVARASSTPVTQVMRLVQAGQREAALGADSIWLCASCETCT
TRCPNDIDVARVMDVLRHMARRENHVAEKNIRDFWDAFLESVEKHGRVYEVGLMAAYVRKTGRFWTDADLAPAALGKGKL
PLRPHPVTDKEAIRQIFRRYRERSA

Sequences:

>Translated_185_residues
MRDDRTIRRCDAAFTQSVQQQSEQNMALCYQCGNCTAGCPVARASSTPVTQVMRLVQAGQREAALGADSIWLCASCETCT
TRCPNDIDVARVMDVLRHMARRENHVAEKNIRDFWDAFLESVEKHGRVYEVGLMAAYVRKTGRFWTDADLAPAALGKGKL
PLRPHPVTDKEAIRQIFRRYRERSA
>Mature_185_residues
MRDDRTIRRCDAAFTQSVQQQSEQNMALCYQCGNCTAGCPVARASSTPVTQVMRLVQAGQREAALGADSIWLCASCETCT
TRCPNDIDVARVMDVLRHMARRENHVAEKNIRDFWDAFLESVEKHGRVYEVGLMAAYVRKTGRFWTDADLAPAALGKGKL
PLRPHPVTDKEAIRQIFRRYRERSA

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B) [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 20907; Mature: 20907

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDRTIRRCDAAFTQSVQQQSEQNMALCYQCGNCTAGCPVARASSTPVTQVMRLVQAGQ
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
REAALGADSIWLCASCETCTTRCPNDIDVARVMDVLRHMARRENHVAEKNIRDFWDAFLE
HHHHCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVEKHGRVYEVGLMAAYVRKTGRFWTDADLAPAALGKGKLPLRPHPVTDKEAIRQIFRRY
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
RERSA
HHCCC
>Mature Secondary Structure
MRDDRTIRRCDAAFTQSVQQQSEQNMALCYQCGNCTAGCPVARASSTPVTQVMRLVQAGQ
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
REAALGADSIWLCASCETCTTRCPNDIDVARVMDVLRHMARRENHVAEKNIRDFWDAFLE
HHHHCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVEKHGRVYEVGLMAAYVRKTGRFWTDADLAPAALGKGKLPLRPHPVTDKEAIRQIFRRY
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
RERSA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]