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The map label for this gene is dcrA [H]

Identifier: 78358547

GI number: 78358547

Start: 3466621

End: 3468708

Strand: Direct

Name: dcrA [H]

Synonym: Dde_3508

Alternate gene names: 78358547

Gene position: 3466621-3468708 (Clockwise)

Preceding gene: 78358542

Following gene: 78358548

Centisome position: 92.93

GC content: 55.36

Gene sequence:

>2088_bases
GTGAAATCGTTAGGTACATACACCATCGGCCTTCTTCTGGCCGCATCGCTCGCCATATCAGCTGCCTGCGGAATACTCTT
TCACCTTCAGGAAAAAAAAGTCCGGCAGGAAACGCTGCAGAATGAATACGCAACCATGATTCATTCACTGCAGCAGCGGC
TGGAAAAAAAGATTGATATCGGCATCACCAACAGCATCTCCTTTGCCTCTTCGGCCGACCTTGTGCATCTTGTCCGCACA
CAGGACAGGGAAGGTCTGATGCGCCATGTAAGCAGTATCGGTGACATATTTAAAAAAACTTCCAACTTCCGCGGCATCAG
GCTTCACATTTTCGATGCGGAAGGCCGTACGCTGGTACGCAGCTGGAACAAAGATAAGCACGGGGATGCGCCCGCAGCCG
CCGGCGAAGTGCTGCGTGCCGCCGCCCGGCAGGGGCAGGCGGCTTCCGCTTTTGTACTGGATGAAGACGGCCTGCTTCTG
CGCGGCACAGCGTTTATCGGCCAGCCGGACAACATCGCGGGCTATATCCAGTTCATACAGGGTGTTGGCAGCATTTCTCG
CGACTTTGAAAAAGAGGGCATGTTTTTTGTACAGCTGGTCAGTGCCGACGGGGCCTCTCCTCCGGACAGCCTCAGAAACA
ATACACGTCTGGGCGGTTATGTACTGGCAAACAACAAGTGGTTTTCTTCATCCGTGGTCCAGCGGCTTGAGGACATAGAC
CTTACACGCGTCACCCGCGACAGATATTTCATCTCCGACGGCCTGTTCGTTGTGGTTGAACCAGTTCTGGATCTGCAGGG
ACGGCAGACCGGCCTGTATCTGCTGGCCAAAGACGCGCACATCGTCGAAGCCAAAATCAGCGCCGCCATGGAAGCAGGGT
TATATATACTCATCACCATGGGATTCGGTTTTCTTATCATTTTCACGGTCATATACGCGGTCCTGCGCATAAAGGTCATC
ACTCCGCTGGTGAATATCAAAAAATTTGCAGAAGAGGTCGCCGCCGGTGACTGGCAGGCCACACCCCGCGGAGCATATGC
ATTTGAATTTGATGTGCTGAAGCAGAGTCTTCTTTCCATGGTGCACGAATTGGAAGCCGCGAATGAAACGGCGGAACAGA
AAAGCGCGGCAGCCACCCGCGAAGCCGAAAAATCACAGCGGGCCGCGGAAGAAGCGGCAGAAGCCAAAATTCAGGCCGAA
AAGGCGCGGTCCGAAGGCGTGCTGTATGCCACGCGCCAGCTCAGTCAGGCAGTGTCCGGCATTATGGAAACGGCCGACGA
ACTGGCCAGAGACATTGACGGGTGCAGTCAGGGCGCCCATGAACAGGCACAGCAACTTCAGCTTTCCTCCACAGCCATGG
AGGAAATGAACGCCAGTGTGATGGAAATAGCAGGACGGACCGGACAGAATGCCGAATCAACAGAACATGCCAGAAAAGAA
GCTGATTCCGGAAACAGCGTGGTACAGGAAGTCATCCGCTCCATTAACGAAGTGCATGAAATAGCCCGCAACCTTGCAAC
GGAGATGGACGAACTGGGCAAACACGCTGCCGGCATCGGTCAGGTTGTCAACATGATATCCGACATTGCAGACCAGACAA
ATCTGCTGGCACTGAACGCCGCCATAGAAGCCGCACGGGCCGGAGAATCCGGACGGGGTTTTGCCGTGGTGGCGGACGAG
GTGCGCAAACTTGCCGAAAAAACACAAAGCGCCACCAAAGAGGTGGAGCGTTCAGTCTCTGCAATCCGCACCAGCATCAC
AGGCAACATTGCAAATGCGCAGAACGCGCTTGCCGTCACACAGACCGCCAACGGCTATGCCGCCGACTCCGGCAAGGCGC
TGGAAACCATCGTCCGGCTGATTTCCGCCTCGTCACAGGAAGTCAGCGCCATCGCGCATTCTTCAGAGCAGCAGGTCGAG
GCATCCGAAGCCATCAACGCGTCACTCGACAAGGTTGCCACCCTTTCTTCCTCCACGGTCTCGCTGATGGAAGAAGCGGC
AAAGGCGGTACAGCACCTTGCGGGACTGGCCACACAGCTGCGCCAGATAATCTGCTCAATGGAGGATGAAAACAATCCGA
TGTGCTGA

Upstream 100 bases:

>100_bases
ACCCGCCAGAGAATACTATACGCTCCGGCCCCGACTGCGGCACACAGCGTTCCGCCGAGGCGCGCCCCTGCCTTTCACCC
CTTCTTGCGGAGGATGCCCC

Downstream 100 bases:

>100_bases
ACACCCCCTGCCGGAAGGGTTCGGAACAGCAAGCTTCTTCAAAATGCTTCCCATCGCGTCTGTCTTTCTATATGAGATTC
AGGATCATACTATCCGGAGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 695; Mature: 695

Protein sequence:

>695_residues
MKSLGTYTIGLLLAASLAISAACGILFHLQEKKVRQETLQNEYATMIHSLQQRLEKKIDIGITNSISFASSADLVHLVRT
QDREGLMRHVSSIGDIFKKTSNFRGIRLHIFDAEGRTLVRSWNKDKHGDAPAAAGEVLRAAARQGQAASAFVLDEDGLLL
RGTAFIGQPDNIAGYIQFIQGVGSISRDFEKEGMFFVQLVSADGASPPDSLRNNTRLGGYVLANNKWFSSSVVQRLEDID
LTRVTRDRYFISDGLFVVVEPVLDLQGRQTGLYLLAKDAHIVEAKISAAMEAGLYILITMGFGFLIIFTVIYAVLRIKVI
TPLVNIKKFAEEVAAGDWQATPRGAYAFEFDVLKQSLLSMVHELEAANETAEQKSAAATREAEKSQRAAEEAAEAKIQAE
KARSEGVLYATRQLSQAVSGIMETADELARDIDGCSQGAHEQAQQLQLSSTAMEEMNASVMEIAGRTGQNAESTEHARKE
ADSGNSVVQEVIRSINEVHEIARNLATEMDELGKHAAGIGQVVNMISDIADQTNLLALNAAIEAARAGESGRGFAVVADE
VRKLAEKTQSATKEVERSVSAIRTSITGNIANAQNALAVTQTANGYAADSGKALETIVRLISASSQEVSAIAHSSEQQVE
ASEAINASLDKVATLSSSTVSLMEEAAKAVQHLAGLATQLRQIICSMEDENNPMC

Sequences:

>Translated_695_residues
MKSLGTYTIGLLLAASLAISAACGILFHLQEKKVRQETLQNEYATMIHSLQQRLEKKIDIGITNSISFASSADLVHLVRT
QDREGLMRHVSSIGDIFKKTSNFRGIRLHIFDAEGRTLVRSWNKDKHGDAPAAAGEVLRAAARQGQAASAFVLDEDGLLL
RGTAFIGQPDNIAGYIQFIQGVGSISRDFEKEGMFFVQLVSADGASPPDSLRNNTRLGGYVLANNKWFSSSVVQRLEDID
LTRVTRDRYFISDGLFVVVEPVLDLQGRQTGLYLLAKDAHIVEAKISAAMEAGLYILITMGFGFLIIFTVIYAVLRIKVI
TPLVNIKKFAEEVAAGDWQATPRGAYAFEFDVLKQSLLSMVHELEAANETAEQKSAAATREAEKSQRAAEEAAEAKIQAE
KARSEGVLYATRQLSQAVSGIMETADELARDIDGCSQGAHEQAQQLQLSSTAMEEMNASVMEIAGRTGQNAESTEHARKE
ADSGNSVVQEVIRSINEVHEIARNLATEMDELGKHAAGIGQVVNMISDIADQTNLLALNAAIEAARAGESGRGFAVVADE
VRKLAEKTQSATKEVERSVSAIRTSITGNIANAQNALAVTQTANGYAADSGKALETIVRLISASSQEVSAIAHSSEQQVE
ASEAINASLDKVATLSSSTVSLMEEAAKAVQHLAGLATQLRQIICSMEDENNPMC
>Mature_695_residues
MKSLGTYTIGLLLAASLAISAACGILFHLQEKKVRQETLQNEYATMIHSLQQRLEKKIDIGITNSISFASSADLVHLVRT
QDREGLMRHVSSIGDIFKKTSNFRGIRLHIFDAEGRTLVRSWNKDKHGDAPAAAGEVLRAAARQGQAASAFVLDEDGLLL
RGTAFIGQPDNIAGYIQFIQGVGSISRDFEKEGMFFVQLVSADGASPPDSLRNNTRLGGYVLANNKWFSSSVVQRLEDID
LTRVTRDRYFISDGLFVVVEPVLDLQGRQTGLYLLAKDAHIVEAKISAAMEAGLYILITMGFGFLIIFTVIYAVLRIKVI
TPLVNIKKFAEEVAAGDWQATPRGAYAFEFDVLKQSLLSMVHELEAANETAEQKSAAATREAEKSQRAAEEAAEAKIQAE
KARSEGVLYATRQLSQAVSGIMETADELARDIDGCSQGAHEQAQQLQLSSTAMEEMNASVMEIAGRTGQNAESTEHARKE
ADSGNSVVQEVIRSINEVHEIARNLATEMDELGKHAAGIGQVVNMISDIADQTNLLALNAAIEAARAGESGRGFAVVADE
VRKLAEKTQSATKEVERSVSAIRTSITGNIANAQNALAVTQTANGYAADSGKALETIVRLISASSQEVSAIAHSSEQQVE
ASEAINASLDKVATLSSSTVSLMEEAAKAVQHLAGLATQLRQIICSMEDENNPMC

Specific function: Signal Transducer For Aerotaxis. The Aerotactic Response Is The Accumulation Of Cells Around Air Bubbles. The Nature Of The Sensory Stimulus Detected By This Protein Is The Proton Motive Force Or Cellular Redox State. It Uses A FAD Prosthetic Group As A R

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=269, Percent_Identity=27.1375464684015, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1787690, Length=400, Percent_Identity=25, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788195, Length=192, Percent_Identity=34.375, Blast_Score=93, Evalue=7e-20,
Organism=Escherichia coli, GI1788194, Length=240, Percent_Identity=31.6666666666667, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI2367378, Length=158, Percent_Identity=36.7088607594937, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 74916; Mature: 74916

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLGTYTIGLLLAASLAISAACGILFHLQEKKVRQETLQNEYATMIHSLQQRLEKKIDI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GITNSISFASSADLVHLVRTQDREGLMRHVSSIGDIFKKTSNFRGIRLHIFDAEGRTLVR
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
SWNKDKHGDAPAAAGEVLRAAARQGQAASAFVLDEDGLLLRGTAFIGQPDNIAGYIQFIQ
HCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHH
GVGSISRDFEKEGMFFVQLVSADGASPPDSLRNNTRLGGYVLANNKWFSSSVVQRLEDID
HHHHHHHHHHHCCEEEEEEEECCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCC
LTRVTRDRYFISDGLFVVVEPVLDLQGRQTGLYLLAKDAHIVEAKISAAMEAGLYILITM
HHHHHHCCEEECCCCCEEEEHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHH
GFGFLIIFTVIYAVLRIKVITPLVNIKKFAEEVAAGDWQATPRGAYAFEFDVLKQSLLSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHH
VHELEAANETAEQKSAAATREAEKSQRAAEEAAEAKIQAEKARSEGVLYATRQLSQAVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IMETADELARDIDGCSQGAHEQAQQLQLSSTAMEEMNASVMEIAGRTGQNAESTEHARKE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHH
ADSGNSVVQEVIRSINEVHEIARNLATEMDELGKHAAGIGQVVNMISDIADQTNLLALNA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
AIEAARAGESGRGFAVVADEVRKLAEKTQSATKEVERSVSAIRTSITGNIANAQNALAVT
HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
QTANGYAADSGKALETIVRLISASSQEVSAIAHSSEQQVEASEAINASLDKVATLSSSTV
ECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLMEEAAKAVQHLAGLATQLRQIICSMEDENNPMC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSLGTYTIGLLLAASLAISAACGILFHLQEKKVRQETLQNEYATMIHSLQQRLEKKIDI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GITNSISFASSADLVHLVRTQDREGLMRHVSSIGDIFKKTSNFRGIRLHIFDAEGRTLVR
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
SWNKDKHGDAPAAAGEVLRAAARQGQAASAFVLDEDGLLLRGTAFIGQPDNIAGYIQFIQ
HCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHH
GVGSISRDFEKEGMFFVQLVSADGASPPDSLRNNTRLGGYVLANNKWFSSSVVQRLEDID
HHHHHHHHHHHCCEEEEEEEECCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCC
LTRVTRDRYFISDGLFVVVEPVLDLQGRQTGLYLLAKDAHIVEAKISAAMEAGLYILITM
HHHHHHCCEEECCCCCEEEEHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHH
GFGFLIIFTVIYAVLRIKVITPLVNIKKFAEEVAAGDWQATPRGAYAFEFDVLKQSLLSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHH
VHELEAANETAEQKSAAATREAEKSQRAAEEAAEAKIQAEKARSEGVLYATRQLSQAVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IMETADELARDIDGCSQGAHEQAQQLQLSSTAMEEMNASVMEIAGRTGQNAESTEHARKE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHH
ADSGNSVVQEVIRSINEVHEIARNLATEMDELGKHAAGIGQVVNMISDIADQTNLLALNA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
AIEAARAGESGRGFAVVADEVRKLAEKTQSATKEVERSVSAIRTSITGNIANAQNALAVT
HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
QTANGYAADSGKALETIVRLISASSQEVSAIAHSSEQQVEASEAINASLDKVATLSSSTV
ECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLMEEAAKAVQHLAGLATQLRQIICSMEDENNPMC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]