| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358501
Identifier: 78358501
GI number: 78358501
Start: 3422435
End: 3422986
Strand: Direct
Name: 78358501
Synonym: Dde_3462
Alternate gene names: NA
Gene position: 3422435-3422986 (Clockwise)
Preceding gene: 78358498
Following gene: 78358502
Centisome position: 91.75
GC content: 66.12
Gene sequence:
>552_bases GTGCATTTTCCGGCAACACGGTCACGGCTTCCGGCATCCGGCCCCGCGGCACCGGACGCCTGTGTACATCGCGGCACCTC TGCCGACGGCACCTCGCGCACCCTGCCGCCACAGACTTCCACCCTGCGCCTGCCTGCCCCGCGGCATGCTCCTTCGGCAT GCGTCACCATCAGCAGAGTCACACCTTCGGCATTCAATGCCGCCAGCCTGCTGTCCACAACGCCACGGCTTTCCGGGTCA AGCGCGCTTGTGGGCTCGTCCAGCAGCAGCATCTGCGGACCGGCAAGCATGGCGCGGATGATGCACAGCCGCTGGCGCTG CCCCACGCTCAACACGGACGCGGAGTCGTCCAGCCCCACGGATGACAGCAGAAACCTGTCCAGCCAGTGCCGTAATGCCG CATCATCAGGACGCCGCAGCGCGGCATTGGCGCGAAAACCGAAAGCGAGCAGCAGATTGTGGCGCACCGTTCCTTCATCG ACCACGGGGGTCTGCTGTATGAACCCCACCCTGCGCCGCAGTTCGTGCACATCCAGTTGCGCCAGCGGCTGA
Upstream 100 bases:
>100_bases CCGCCCCGGAAAGCAATACAAACCCCAGCGCAAAACACAGCTGCCACCACTCGATGGCAATGTATCCGGACGCCATGCCA CTCCCTCCCCGCTGTCCGCA
Downstream 100 bases:
>100_bases CCGTCCAATGCTATGCAGCCCGATGCGGGCTCCTCCAGACGCGCGGCAAGACGCAGCAGGGTTGACTTGCCCGCACCGGA AGGTCCGGTAACCAGCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MHFPATRSRLPASGPAAPDACVHRGTSADGTSRTLPPQTSTLRLPAPRHAPSACVTISRVTPSAFNAASLLSTTPRLSGS SALVGSSSSSICGPASMARMMHSRWRCPTLNTDAESSSPTDDSRNLSSQCRNAASSGRRSAALARKPKASSRLWRTVPSS TTGVCCMNPTLRRSSCTSSCASG
Sequences:
>Translated_183_residues MHFPATRSRLPASGPAAPDACVHRGTSADGTSRTLPPQTSTLRLPAPRHAPSACVTISRVTPSAFNAASLLSTTPRLSGS SALVGSSSSSICGPASMARMMHSRWRCPTLNTDAESSSPTDDSRNLSSQCRNAASSGRRSAALARKPKASSRLWRTVPSS TTGVCCMNPTLRRSSCTSSCASG >Mature_183_residues MHFPATRSRLPASGPAAPDACVHRGTSADGTSRTLPPQTSTLRLPAPRHAPSACVTISRVTPSAFNAASLLSTTPRLSGS SALVGSSSSSICGPASMARMMHSRWRCPTLNTDAESSSPTDDSRNLSSQCRNAASSGRRSAALARKPKASSRLWRTVPSS TTGVCCMNPTLRRSSCTSSCASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18949; Mature: 18949
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFPATRSRLPASGPAAPDACVHRGTSADGTSRTLPPQTSTLRLPAPRHAPSACVTISRV CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECC TPSAFNAASLLSTTPRLSGSSALVGSSSSSICGPASMARMMHSRWRCPTLNTDAESSSPT CCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC DDSRNLSSQCRNAASSGRRSAALARKPKASSRLWRTVPSSTTGVCCMNPTLRRSSCTSSC CCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHH ASG CCC >Mature Secondary Structure MHFPATRSRLPASGPAAPDACVHRGTSADGTSRTLPPQTSTLRLPAPRHAPSACVTISRV CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECC TPSAFNAASLLSTTPRLSGSSALVGSSSSSICGPASMARMMHSRWRCPTLNTDAESSSPT CCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC DDSRNLSSQCRNAASSGRRSAALARKPKASSRLWRTVPSSTTGVCCMNPTLRRSSCTSSC CCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHH ASG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA