| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is purE [H]
Identifier: 78358498
GI number: 78358498
Start: 3420694
End: 3421200
Strand: Direct
Name: purE [H]
Synonym: Dde_3459
Alternate gene names: 78358498
Gene position: 3420694-3421200 (Clockwise)
Preceding gene: 78358497
Following gene: 78358501
Centisome position: 91.7
GC content: 62.13
Gene sequence:
>507_bases ATGCCTCAGGTCGGCATTTTCATCGGAAGCATCTCTGACGAGGAAACCCTGCGCCCCTGCACCGAGGTGCTGGACAAGCT GGGCATCAGCTATCTGTTTACTGTCAGTTCCGCGCACCGTACCCCTGAACGCACGGAATCGCTGGTGGATACGCTGGAAA AAGACGGCTGTCAGGTCTTTATCTGTGCCGCAGGCATGGCCGCCCATCTGGCGGGCGCCGTGGCCGCACGCACTCTGCGC CCTGTCATCGGGGTACCTGTCACCGCCTCAAAACTGGGCGGCATGGATGCGCTGCTGGCAACGGTGCAGATGCCTCCCGG ATATCCGGTGGGCACCGTGGCACTGGACAAGGCAGGCGCCAAAAACGCAGGCTGGTTTGCCGCGCAGATAATCGCCCTGA ACAACCCGGAACTGGCACAGCGCCTTGCCGCGGCACGCAAGGAGTTCACCGCCGAGGTGATACGCGCCGGAGAAGATCTG GAACGCCGTATGGCACAGGGCAGATAA
Upstream 100 bases:
>100_bases GCGTAATACATCTTCAGCGGGGCACAGCTCCGCAACCGGGACTGCGGGCCGCCTGTGCGGCCCGCTCTGATATCCACCAT CAACCTGTATGGAGTAGACA
Downstream 100 bases:
>100_bases TCCCTGTCCTCAGACCGAAAGCAAGGGCCGTGATCGCATGCGATCACGGCCCTTTTCTGCTTTTCTGCACAGGTTGCCTT TACGCCGTGCCGAAAACATC
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPQVGIFIGSISDEETLRPCTEVLDKLGISYLFTVSSAHRTPERTESLVDTLEKDGCQVFICAAGMAAHLAGAVAARTLR PVIGVPVTASKLGGMDALLATVQMPPGYPVGTVALDKAGAKNAGWFAAQIIALNNPELAQRLAAARKEFTAEVIRAGEDL ERRMAQGR
Sequences:
>Translated_168_residues MPQVGIFIGSISDEETLRPCTEVLDKLGISYLFTVSSAHRTPERTESLVDTLEKDGCQVFICAAGMAAHLAGAVAARTLR PVIGVPVTASKLGGMDALLATVQMPPGYPVGTVALDKAGAKNAGWFAAQIIALNNPELAQRLAAARKEFTAEVIRAGEDL ERRMAQGR >Mature_167_residues PQVGIFIGSISDEETLRPCTEVLDKLGISYLFTVSSAHRTPERTESLVDTLEKDGCQVFICAAGMAAHLAGAVAARTLRP VIGVPVTASKLGGMDALLATVQMPPGYPVGTVALDKAGAKNAGWFAAQIIALNNPELAQRLAAARKEFTAEVIRAGEDLE RRMAQGR
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=152, Percent_Identity=48.6842105263158, Blast_Score=112, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6324702, Length=160, Percent_Identity=38.75, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 17748; Mature: 17617
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQVGIFIGSISDEETLRPCTEVLDKLGISYLFTVSSAHRTPERTESLVDTLEKDGCQVF CCCCEEEEECCCCCHHHHHHHHHHHHCCHHHEEEEHHCCCCHHHHHHHHHHHHHCCCEEE ICAAGMAAHLAGAVAARTLRPVIGVPVTASKLGGMDALLATVQMPPGYPVGTVALDKAGA EECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHCCCCCCCCCCEEECCCCC KNAGWFAAQIIALNNPELAQRLAAARKEFTAEVIRAGEDLERRMAQGR CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure PQVGIFIGSISDEETLRPCTEVLDKLGISYLFTVSSAHRTPERTESLVDTLEKDGCQVF CCCEEEEECCCCCHHHHHHHHHHHHCCHHHEEEEHHCCCCHHHHHHHHHHHHHCCCEEE ICAAGMAAHLAGAVAARTLRPVIGVPVTASKLGGMDALLATVQMPPGYPVGTVALDKAGA EECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHCCCCCCCCCCEEECCCCC KNAGWFAAQIIALNNPELAQRLAAARKEFTAEVIRAGEDLERRMAQGR CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]