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The map label for this gene is hspC2 [H]

Identifier: 78358451

GI number: 78358451

Start: 3372076

End: 3372645

Strand: Direct

Name: hspC2 [H]

Synonym: Dde_3412

Alternate gene names: 78358451

Gene position: 3372076-3372645 (Clockwise)

Preceding gene: 78358449

Following gene: 78358452

Centisome position: 90.4

GC content: 59.82

Gene sequence:

>570_bases
ATGGACATTGATTTCAAGAAATTGGCTCCCTGGAACTGGTTCAAGAAGGAGCAGGAAGAACAACAGAGCACTGCCTCGCT
GCCGATGCAGCGCAATGACCTGCCGGTGGCGGGTGGGCCCGTCAGTCCCATCCTGCAATTGCATCGCGAGATCGACCGCC
TCTTTGACGATGCATTTCGAGGCTTCGGCTTTCCGGCGCTGGCCATGCCGCGATGGCCGTCGGACTGGCCGGGCCTGCTG
AAGCCGGCACTTGACATCCAGGAAACCGACAAGCTGTATAAGATTTCTTTGGAGGTTCCCGGCGTCGAGGAAAAGGATAT
CCAGATCACGCTCGACAACGACGTGCTGCTGGTGCGCGGTGAAAAGCGTCAGGAGCAGGAAACGAAAGACGGCGGTTTCC
ACCGGGTGGAGCGCTCCTACGGCAGCTTTCAGCGCGCTCTGAACCTGCCGGCCGATGCCAACCAAGACACGATCAAGGCC
GCTTTCAAGAACGGCGTGCTCACGATCACGATGGAAAAGCGCGAGGCCTGCGCGCCCAAGCAGGGCCGCTCGATCCCCAT
CAACGGCTGA

Upstream 100 bases:

>100_bases
CAAAGTCAGCGGATCACTCCGTGTCGTCTGGGCGCGCTGTCCGTCGCCGCAGGCAAACGGAGTGAGCGAGAGTCTTCAAT
TTTTCTTCTGGAGGTGTGAC

Downstream 100 bases:

>100_bases
CGCTGGTCGGCTCGCTTTTCTCAAAACCACAAAAGGATGAGACGCCGTGATCGGCGGCGTCTCATCAAATCAATCTTTAC
AGGAGCATCAGCATGGCCAG

Product: small HspC2 heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MDIDFKKLAPWNWFKKEQEEQQSTASLPMQRNDLPVAGGPVSPILQLHREIDRLFDDAFRGFGFPALAMPRWPSDWPGLL
KPALDIQETDKLYKISLEVPGVEEKDIQITLDNDVLLVRGEKRQEQETKDGGFHRVERSYGSFQRALNLPADANQDTIKA
AFKNGVLTITMEKREACAPKQGRSIPING

Sequences:

>Translated_189_residues
MDIDFKKLAPWNWFKKEQEEQQSTASLPMQRNDLPVAGGPVSPILQLHREIDRLFDDAFRGFGFPALAMPRWPSDWPGLL
KPALDIQETDKLYKISLEVPGVEEKDIQITLDNDVLLVRGEKRQEQETKDGGFHRVERSYGSFQRALNLPADANQDTIKA
AFKNGVLTITMEKREACAPKQGRSIPING
>Mature_189_residues
MDIDFKKLAPWNWFKKEQEEQQSTASLPMQRNDLPVAGGPVSPILQLHREIDRLFDDAFRGFGFPALAMPRWPSDWPGLL
KPALDIQETDKLYKISLEVPGVEEKDIQITLDNDVLLVRGEKRQEQETKDGGFHRVERSYGSFQRALNLPADANQDTIKA
AFKNGVLTITMEKREACAPKQGRSIPING

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 21431; Mature: 21431

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDFKKLAPWNWFKKEQEEQQSTASLPMQRNDLPVAGGPVSPILQLHREIDRLFDDAFR
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GFGFPALAMPRWPSDWPGLLKPALDIQETDKLYKISLEVPGVEEKDIQITLDNDVLLVRG
HCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEC
EKRQEQETKDGGFHRVERSYGSFQRALNLPADANQDTIKAAFKNGVLTITMEKREACAPK
CCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCHHCCCC
QGRSIPING
CCCCCCCCC
>Mature Secondary Structure
MDIDFKKLAPWNWFKKEQEEQQSTASLPMQRNDLPVAGGPVSPILQLHREIDRLFDDAFR
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GFGFPALAMPRWPSDWPGLLKPALDIQETDKLYKISLEVPGVEEKDIQITLDNDVLLVRG
HCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEC
EKRQEQETKDGGFHRVERSYGSFQRALNLPADANQDTIKAAFKNGVLTITMEKREACAPK
CCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCHHCCCC
QGRSIPING
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA