| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78358449
Identifier: 78358449
GI number: 78358449
Start: 3370884
End: 3371360
Strand: Direct
Name: 78358449
Synonym: Dde_3410
Alternate gene names: NA
Gene position: 3370884-3371360 (Clockwise)
Preceding gene: 78358447
Following gene: 78358451
Centisome position: 90.37
GC content: 53.88
Gene sequence:
>477_bases ATGGTTTCTGTTGATATGAGTTGCACCAACCGTTCTCCGCTACGATTGCATCAGCATCCGCTCCTCAGCATGGTCAACGC GCCACTCCTTGCTTCGGTCATCGGTCAGGATCACGGTGAAAACGGACCTACCAATCGAAGCAGAACGGCCGTCTTCAGAA TAGTCATCAATCCCGAAGTGGGCAGAGAGAGACGCCGTAACCACAGCGCCAGGTGGTGCCAGTTGCCCGGCGTTTCGGAG GAGTGTTCTCTGACACATACTGGCAAGAGTCCGGTTCCTCTCAATGTCGAATTCCGATGGTTCGATTCGCAGTTCCAGGA GGTCAATTGCCACCGTCAGCAACTGGTGCTGATACGCCAGCCAGGCATAATGCTGGGCCGAACAGGCAAACATATGAGCG ATGCCGCTGGCGAAGCTCTTGATATGCTTGCGGCCCAATTTTTTCTGCTCGAATGGTGTATCTGCCGTTACCATTGA
Upstream 100 bases:
>100_bases GCTGCGGGTCGCGCCGTCTTTCTTGACGTCCCAGCCGCCGTCGGCGTTGGGTACGACATGATGTGATCCTGGTTTCTTTG GCATGGTCGCCTCATATTTC
Downstream 100 bases:
>100_bases TCAATCCTCGCGCTTTGACTCAACCAGACAGGTTCACTCCGGCTGCCAGGCGCAATCTGCCCAGTGCGCTTCGTAGCGTT TCACAAAGTCTTTCATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MVSVDMSCTNRSPLRLHQHPLLSMVNAPLLASVIGQDHGENGPTNRSRTAVFRIVINPEVGRERRRNHSARWCQLPGVSE ECSLTHTGKSPVPLNVEFRWFDSQFQEVNCHRQQLVLIRQPGIMLGRTGKHMSDAAGEALDMLAAQFFLLEWCICRYH
Sequences:
>Translated_158_residues MVSVDMSCTNRSPLRLHQHPLLSMVNAPLLASVIGQDHGENGPTNRSRTAVFRIVINPEVGRERRRNHSARWCQLPGVSE ECSLTHTGKSPVPLNVEFRWFDSQFQEVNCHRQQLVLIRQPGIMLGRTGKHMSDAAGEALDMLAAQFFLLEWCICRYH >Mature_158_residues MVSVDMSCTNRSPLRLHQHPLLSMVNAPLLASVIGQDHGENGPTNRSRTAVFRIVINPEVGRERRRNHSARWCQLPGVSE ECSLTHTGKSPVPLNVEFRWFDSQFQEVNCHRQQLVLIRQPGIMLGRTGKHMSDAAGEALDMLAAQFFLLEWCICRYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17944; Mature: 17944
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVDMSCTNRSPLRLHQHPLLSMVNAPLLASVIGQDHGENGPTNRSRTAVFRIVINPEV CEEECCCCCCCCCCEEHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC GRERRRNHSARWCQLPGVSEECSLTHTGKSPVPLNVEFRWFDSQFQEVNCHRQQLVLIRQ CHHHHHCCCCCEEECCCCCCCCCEEECCCCCCCEEEEEEECCCHHHHCCCCCEEEEEEEC PGIMLGRTGKHMSDAAGEALDMLAAQFFLLEWCICRYH CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSVDMSCTNRSPLRLHQHPLLSMVNAPLLASVIGQDHGENGPTNRSRTAVFRIVINPEV CEEECCCCCCCCCCEEHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC GRERRRNHSARWCQLPGVSEECSLTHTGKSPVPLNVEFRWFDSQFQEVNCHRQQLVLIRQ CHHHHHCCCCCEEECCCCCCCCCEEECCCCCCCEEEEEEECCCHHHHCCCCCEEEEEEEC PGIMLGRTGKHMSDAAGEALDMLAAQFFLLEWCICRYH CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA