| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358431
Identifier: 78358431
GI number: 78358431
Start: 3356201
End: 3357364
Strand: Direct
Name: 78358431
Synonym: Dde_3391
Alternate gene names: NA
Gene position: 3356201-3357364 (Clockwise)
Preceding gene: 78358430
Following gene: 78358432
Centisome position: 89.97
GC content: 60.31
Gene sequence:
>1164_bases ATGTCCGCCCAGACGCCTCGACTCTCTAAAACGCTTGATGAATGCCGCCAGATGCTCTTTGCCCGTATCGAAGAAGTGCA GGACGAGTATCAGGCCAAGGGATGGCTGCCGTTGCGCCTGAACCTGAACAAGGGCGTGGTGCGCGGCCTGGCCGAGATTT TCGCATGGGGGTTGTATCAGCTGTACCAGTTTCTTGCCGCCATTCTTGTGGAGGGCATCCCCAAGCAGGCCAGCGGTGAA TGGCTGGACCTGCACGCAGATCAGGTCGAGCAACCGCGCAAGCAGGCCACCAAGGCCACGGGCAAATTACGGTTTATTCG CCAGACCGCGCAGGGCAACACGCTTATTCCCGCAGGCCGCATTGTACGCACCATGCCGGACGGCACCGGCGCAACATACC GTTACATCTCTATTGCCGACACGGTTATAGCTGAGGGCCAGACCGAAGTGGCCGTGGCTGTTGTCGCCGAGGAGTACGGA GCCGCCGCCAACCTGACCGCGGGACAGGCGCTGGAGCTCATTACTCCGGTCAAGGGCATTACCGCCGTGGAAGTCCGGGC CGATTGGCTGGATACCGAAGGCGCGGATACCGAACCGGACAGGCTGGTACAGGCCCGTTATCCCTTGGCATGGCAGGGCA ACAACGGTTCCTCATATCACGTCTACAAGCGGGCCGCGTTGGGAGTAACCGGTGTGGTGGCCTGTACCGTGCTGGATCAA CATCCCCGTGGTCAAGGCACCGTGGACGCGATCATCAAAGGCGCGGCTGGCATTCCTACCACCGACCTGCTGGATAAGGT GCGGGCCGCCATCGATGCCGAGGTTTTCGTAAATGACGATCTGCTTGTCAAAGCCCCGCAGGCCATTGCGGCGGCGATTA CCGGAACTCTGTTCCTGTTACCGGGCACGGTAGTTGAAACCGCGCTGGGAGCAGCGGAAAAGCGCATTCGTGCGCTGTTC ACGGACCCGACTACCGTTTCGGGTATATCTCCCCTGCAGATTGGAGAAGATCTGGCATTGGACCGCCTTACAGCCGCGGT CATGGCGGTACCCGGTGTCAAACGTGTGGAATGGACCGGCCCCGCAGCGGATGTGGTCGTGCCCGACGACGGTTTGGCCA TTCTGCAATCATTGACGCTCAGCCATATGGAGGAAGCTGCATAA
Upstream 100 bases:
>100_bases GAGGCTGCATGGCAGTGGATTGGTGATGATCACCCATACAACCTTGTGTTCCGGGCCAGTGCCGAAGACGGAGCCGTAAA ACTGAAGCAGGTGCTTGCCG
Downstream 100 bases:
>100_bases TGGCCCGCGTTTTCTGGCCATACTTCCGAGATGTGCTGCGCTGGCCGCTCATCTTTCGCCCCGGACCGCTGGCGGCGCTG GTCGAGGGGATAGCCCGTGT
Product: baseplate assembly protein
Products: NA
Alternate protein names: Baseplate J Family Protein; Bacteriophage Protein; Phage Mu -Like Protein; Phage-Like Protein
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSAQTPRLSKTLDECRQMLFARIEEVQDEYQAKGWLPLRLNLNKGVVRGLAEIFAWGLYQLYQFLAAILVEGIPKQASGE WLDLHADQVEQPRKQATKATGKLRFIRQTAQGNTLIPAGRIVRTMPDGTGATYRYISIADTVIAEGQTEVAVAVVAEEYG AAANLTAGQALELITPVKGITAVEVRADWLDTEGADTEPDRLVQARYPLAWQGNNGSSYHVYKRAALGVTGVVACTVLDQ HPRGQGTVDAIIKGAAGIPTTDLLDKVRAAIDAEVFVNDDLLVKAPQAIAAAITGTLFLLPGTVVETALGAAEKRIRALF TDPTTVSGISPLQIGEDLALDRLTAAVMAVPGVKRVEWTGPAADVVVPDDGLAILQSLTLSHMEEAA
Sequences:
>Translated_387_residues MSAQTPRLSKTLDECRQMLFARIEEVQDEYQAKGWLPLRLNLNKGVVRGLAEIFAWGLYQLYQFLAAILVEGIPKQASGE WLDLHADQVEQPRKQATKATGKLRFIRQTAQGNTLIPAGRIVRTMPDGTGATYRYISIADTVIAEGQTEVAVAVVAEEYG AAANLTAGQALELITPVKGITAVEVRADWLDTEGADTEPDRLVQARYPLAWQGNNGSSYHVYKRAALGVTGVVACTVLDQ HPRGQGTVDAIIKGAAGIPTTDLLDKVRAAIDAEVFVNDDLLVKAPQAIAAAITGTLFLLPGTVVETALGAAEKRIRALF TDPTTVSGISPLQIGEDLALDRLTAAVMAVPGVKRVEWTGPAADVVVPDDGLAILQSLTLSHMEEAA >Mature_386_residues SAQTPRLSKTLDECRQMLFARIEEVQDEYQAKGWLPLRLNLNKGVVRGLAEIFAWGLYQLYQFLAAILVEGIPKQASGEW LDLHADQVEQPRKQATKATGKLRFIRQTAQGNTLIPAGRIVRTMPDGTGATYRYISIADTVIAEGQTEVAVAVVAEEYGA AANLTAGQALELITPVKGITAVEVRADWLDTEGADTEPDRLVQARYPLAWQGNNGSSYHVYKRAALGVTGVVACTVLDQH PRGQGTVDAIIKGAAGIPTTDLLDKVRAAIDAEVFVNDDLLVKAPQAIAAAITGTLFLLPGTVVETALGAAEKRIRALFT DPTTVSGISPLQIGEDLALDRLTAAVMAVPGVKRVEWTGPAADVVVPDDGLAILQSLTLSHMEEAA
Specific function: Unknown
COG id: COG3299
COG function: function code S; Uncharacterized homolog of phage Mu protein gp47
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41384; Mature: 41253
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQTPRLSKTLDECRQMLFARIEEVQDEYQAKGWLPLRLNLNKGVVRGLAEIFAWGLYQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH LYQFLAAILVEGIPKQASGEWLDLHADQVEQPRKQATKATGKLRFIRQTAQGNTLIPAGR HHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCC IVRTMPDGTGATYRYISIADTVIAEGQTEVAVAVVAEEYGAAANLTAGQALELITPVKGI EEEECCCCCCCEEEEEEEHHHHHHCCCCEEEEEEEEHHHCCCCCCCCCCHHHHHCCCCCC TAVEVRADWLDTEGADTEPDRLVQARYPLAWQGNNGSSYHVYKRAALGVTGVVACTVLDQ EEEEEEECCCCCCCCCCCHHHHHHCCCCEEEECCCCCEEEEEEHHHCCHHHHHHEEEECC HPRGQGTVDAIIKGAAGIPTTDLLDKVRAAIDAEVFVNDDLLVKAPQAIAAAITGTLFLL CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCEEEECHHHHHHHHHHHHEEC PGTVVETALGAAEKRIRALFTDPTTVSGISPLQIGEDLALDRLTAAVMAVPGVKRVEWTG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCEEEECC PAADVVVPDDGLAILQSLTLSHMEEAA CCCCEEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAQTPRLSKTLDECRQMLFARIEEVQDEYQAKGWLPLRLNLNKGVVRGLAEIFAWGLYQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH LYQFLAAILVEGIPKQASGEWLDLHADQVEQPRKQATKATGKLRFIRQTAQGNTLIPAGR HHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCC IVRTMPDGTGATYRYISIADTVIAEGQTEVAVAVVAEEYGAAANLTAGQALELITPVKGI EEEECCCCCCCEEEEEEEHHHHHHCCCCEEEEEEEEHHHCCCCCCCCCCHHHHHCCCCCC TAVEVRADWLDTEGADTEPDRLVQARYPLAWQGNNGSSYHVYKRAALGVTGVVACTVLDQ EEEEEEECCCCCCCCCCCHHHHHHCCCCEEEECCCCCEEEEEEHHHCCHHHHHHEEEECC HPRGQGTVDAIIKGAAGIPTTDLLDKVRAAIDAEVFVNDDLLVKAPQAIAAAITGTLFLL CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCEEEECHHHHHHHHHHHHEEC PGTVVETALGAAEKRIRALFTDPTTVSGISPLQIGEDLALDRLTAAVMAVPGVKRVEWTG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCEEEECC PAADVVVPDDGLAILQSLTLSHMEEAA CCCCEEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA