| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358429
Identifier: 78358429
GI number: 78358429
Start: 3354624
End: 3355346
Strand: Direct
Name: 78358429
Synonym: Dde_3389
Alternate gene names: NA
Gene position: 3354624-3355346 (Clockwise)
Preceding gene: 78358428
Following gene: 78358430
Centisome position: 89.93
GC content: 58.92
Gene sequence:
>723_bases ATGAACGGTTCTGATACCGATCTGCTCCGGCTTTTCAAGCGTGTGGTGGAATTGTCCATGCCCAATCTGCGCAGCTACTA CCGTGTTACCCGCAAGGCCAAGGTGGTGCAGAGCTATGCCAGTGACGGCCGCTACTGGGCGGACGTGCAACCCCTGCGTA ACGATGACACCCCGGACCCGAAAGAGCCGGTGGTGCCCAAGGTGGAAATCCCCATCCTGTGGGGCGGCCCGGAACGCGGT GTTGTCTGCCCGCCCATGGTCGGTACTCTGTGTGACCTCAGCTATTACGATGGAGATCCCAACTACCCGCGTATCAGCAA CTTCCGTTGGGAAGGCAATGTCGCCCCGGCCTGCGAGGTGGGCGCGTTTGTGATCCAGCTGGACCCGCGCACCTACATCA AGATTGATGCAGGCAAGAACCTTATCGAGGTCACCCCTGCCAACCGGGTGGCCACAGTGGGCGGCAACAAGACGGAGACA ATCGACGGGGTGTGGACGATTAAAGCCCCACTTATCATTCAGGAAGGGAACGTGCAGGCAACCGGCGCTGATGGGGAGGT AGGAACAACAACGGTCAAGGCACACACCCAGCAAGAAGGCAGCATTACCGTGCTGGGGCATGTGCAATGTTCCTCGCTGT CAGTTGCCGACAATGTGGATATTGGCGGCAACCTGAATACTGCGGGGGAGAGTTTTGCGGGGACAAGAAGCGGGGGGATG TAA
Upstream 100 bases:
>100_bases GATGTCCGTCGCGGCATTGATGCCGAATACAGGGCCGTACACGTGGAACACCACATAGAGCAGACCAAAGCCAGGACATG GCTCTGGTACGGAGGCGAAT
Downstream 100 bases:
>100_bases CTATTTTGCTAATAGACCGAAGAATTTTAGGATGTATTGGCTAATAACTGTCATTACTATACCTGCCACACAACCCCAAA TGAAGTCAGCTATACTCTTC
Product: baseplate assembly protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDPKEPVVPKVEIPILWGGPERG VVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEVGAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTET IDGVWTIKAPLIIQEGNVQATGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM
Sequences:
>Translated_240_residues MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDPKEPVVPKVEIPILWGGPERG VVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEVGAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTET IDGVWTIKAPLIIQEGNVQATGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM >Mature_240_residues MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDPKEPVVPKVEIPILWGGPERG VVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEVGAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTET IDGVWTIKAPLIIQEGNVQATGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25895; Mature: 25895
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDP CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC KEPVVPKVEIPILWGGPERGVVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEV CCCCCCEEEEEEEECCCCCCEECCCCHHHHCCCEEECCCCCCCCCCCEEECCCCCCCCCC GAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTETIDGVWTIKAPLIIQEGNVQA CEEEEEECCCEEEEEECCCCEEEECCCCEEEEECCCCCEEECEEEEEEEEEEEECCCEEE TGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM ECCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDP CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC KEPVVPKVEIPILWGGPERGVVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEV CCCCCCEEEEEEEECCCCCCEECCCCHHHHCCCEEECCCCCCCCCCCEEECCCCCCCCCC GAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTETIDGVWTIKAPLIIQEGNVQA CEEEEEECCCEEEEEECCCCEEEECCCCEEEEECCCCCEEECEEEEEEEEEEEECCCEEE TGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM ECCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA