Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358429

Identifier: 78358429

GI number: 78358429

Start: 3354624

End: 3355346

Strand: Direct

Name: 78358429

Synonym: Dde_3389

Alternate gene names: NA

Gene position: 3354624-3355346 (Clockwise)

Preceding gene: 78358428

Following gene: 78358430

Centisome position: 89.93

GC content: 58.92

Gene sequence:

>723_bases
ATGAACGGTTCTGATACCGATCTGCTCCGGCTTTTCAAGCGTGTGGTGGAATTGTCCATGCCCAATCTGCGCAGCTACTA
CCGTGTTACCCGCAAGGCCAAGGTGGTGCAGAGCTATGCCAGTGACGGCCGCTACTGGGCGGACGTGCAACCCCTGCGTA
ACGATGACACCCCGGACCCGAAAGAGCCGGTGGTGCCCAAGGTGGAAATCCCCATCCTGTGGGGCGGCCCGGAACGCGGT
GTTGTCTGCCCGCCCATGGTCGGTACTCTGTGTGACCTCAGCTATTACGATGGAGATCCCAACTACCCGCGTATCAGCAA
CTTCCGTTGGGAAGGCAATGTCGCCCCGGCCTGCGAGGTGGGCGCGTTTGTGATCCAGCTGGACCCGCGCACCTACATCA
AGATTGATGCAGGCAAGAACCTTATCGAGGTCACCCCTGCCAACCGGGTGGCCACAGTGGGCGGCAACAAGACGGAGACA
ATCGACGGGGTGTGGACGATTAAAGCCCCACTTATCATTCAGGAAGGGAACGTGCAGGCAACCGGCGCTGATGGGGAGGT
AGGAACAACAACGGTCAAGGCACACACCCAGCAAGAAGGCAGCATTACCGTGCTGGGGCATGTGCAATGTTCCTCGCTGT
CAGTTGCCGACAATGTGGATATTGGCGGCAACCTGAATACTGCGGGGGAGAGTTTTGCGGGGACAAGAAGCGGGGGGATG
TAA

Upstream 100 bases:

>100_bases
GATGTCCGTCGCGGCATTGATGCCGAATACAGGGCCGTACACGTGGAACACCACATAGAGCAGACCAAAGCCAGGACATG
GCTCTGGTACGGAGGCGAAT

Downstream 100 bases:

>100_bases
CTATTTTGCTAATAGACCGAAGAATTTTAGGATGTATTGGCTAATAACTGTCATTACTATACCTGCCACACAACCCCAAA
TGAAGTCAGCTATACTCTTC

Product: baseplate assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDPKEPVVPKVEIPILWGGPERG
VVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEVGAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTET
IDGVWTIKAPLIIQEGNVQATGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM

Sequences:

>Translated_240_residues
MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDPKEPVVPKVEIPILWGGPERG
VVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEVGAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTET
IDGVWTIKAPLIIQEGNVQATGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM
>Mature_240_residues
MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDPKEPVVPKVEIPILWGGPERG
VVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEVGAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTET
IDGVWTIKAPLIIQEGNVQATGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25895; Mature: 25895

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDP
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
KEPVVPKVEIPILWGGPERGVVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEV
CCCCCCEEEEEEEECCCCCCEECCCCHHHHCCCEEECCCCCCCCCCCEEECCCCCCCCCC
GAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTETIDGVWTIKAPLIIQEGNVQA
CEEEEEECCCEEEEEECCCCEEEECCCCEEEEECCCCCEEECEEEEEEEEEEEECCCEEE
TGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM
ECCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNGSDTDLLRLFKRVVELSMPNLRSYYRVTRKAKVVQSYASDGRYWADVQPLRNDDTPDP
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
KEPVVPKVEIPILWGGPERGVVCPPMVGTLCDLSYYDGDPNYPRISNFRWEGNVAPACEV
CCCCCCEEEEEEEECCCCCCEECCCCHHHHCCCEEECCCCCCCCCCCEEECCCCCCCCCC
GAFVIQLDPRTYIKIDAGKNLIEVTPANRVATVGGNKTETIDGVWTIKAPLIIQEGNVQA
CEEEEEECCCEEEEEECCCCEEEECCCCEEEEECCCCCEEECEEEEEEEEEEEECCCEEE
TGADGEVGTTTVKAHTQQEGSITVLGHVQCSSLSVADNVDIGGNLNTAGESFAGTRSGGM
ECCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA