| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358428
Identifier: 78358428
GI number: 78358428
Start: 3353804
End: 3354637
Strand: Direct
Name: 78358428
Synonym: Dde_3388
Alternate gene names: NA
Gene position: 3353804-3354637 (Clockwise)
Preceding gene: 78358427
Following gene: 78358429
Centisome position: 89.91
GC content: 59.71
Gene sequence:
>834_bases ATGAGCCTGCAACAAAACACTATAGCCGGAATCAATGTCCGTGTCGTCATTGACGGTATGGTGGTGGCCCGTTGCCCCCG GTGTGTTGTTTCCTTCGACCGCCATACCGTTACCAGTTACGGCGAGATTGATGTGCCTGATCCTGAAGGCGTATTGATGC AGCGCGTGAAACCTGGTCAGCACGTGTCTGTCCGCTTCGGCTACCGGGGCCAGCCCGCGCGGGAATGGACCGGTCTTGTG GATGGATGGCGGCCGGGGTTTGGCCGTAACCGCGACCAGCTTACTGTGCAGGTGCTTGGCCCGGAGTTCGCGCCTTTCAT GCGTACCCGTGTAACGGAAGCCTACATGGATGAAACGGCCGATGTACTTGCCCGGCTTATTCTGGCCAAGACCGGCTGCA CTGTCGGCACTGTGGACGTGCCCGCCGTGAATCTGCCCCGGCTCACACTCCGCGATGTGCCGGTGTGGCAGGCCATGGAA CAACTGGCCCACAGCTGCGCCATGGCCCACGGGCAGGATATGAGCCACCACGCCCTCTGGCTGGATGATGCCGGAGCAAT TCAATACGGCCCGCACAATGATGAGCCGGAGGCGGTGCCTGTTATCGCCACCGGAGCGGGGTTGATTGCGCACAACCCTG CTCAGTCACCCAAAGCGCGGGGAAGCGTGGAAACTTTTCTGTTACCAGGTATGCGGGATGGTCGCCTTTTCAAGTTGCAG GATGTCCGTCGCGGCATTGATGCCGAATACAGGGCCGTACACGTGGAACACCACATAGAGCAGACCAAAGCCAGGACATG GCTCTGGTACGGAGGCGAATATGAACGGTTCTGA
Upstream 100 bases:
>100_bases AGATTTCCGAGCAGCGGGCGACCGGCGTAGCCGGTGCAGCGCCCACCAGTTCCACGACCACAGAACCGGGGCTTTCTCCC AGTATACTGGGGGGCCGCTA
Downstream 100 bases:
>100_bases TACCGATCTGCTCCGGCTTTTCAAGCGTGTGGTGGAATTGTCCATGCCCAATCTGCGCAGCTACTACCGTGTTACCCGCA AGGCCAAGGTGGTGCAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSLQQNTIAGINVRVVIDGMVVARCPRCVVSFDRHTVTSYGEIDVPDPEGVLMQRVKPGQHVSVRFGYRGQPAREWTGLV DGWRPGFGRNRDQLTVQVLGPEFAPFMRTRVTEAYMDETADVLARLILAKTGCTVGTVDVPAVNLPRLTLRDVPVWQAME QLAHSCAMAHGQDMSHHALWLDDAGAIQYGPHNDEPEAVPVIATGAGLIAHNPAQSPKARGSVETFLLPGMRDGRLFKLQ DVRRGIDAEYRAVHVEHHIEQTKARTWLWYGGEYERF
Sequences:
>Translated_277_residues MSLQQNTIAGINVRVVIDGMVVARCPRCVVSFDRHTVTSYGEIDVPDPEGVLMQRVKPGQHVSVRFGYRGQPAREWTGLV DGWRPGFGRNRDQLTVQVLGPEFAPFMRTRVTEAYMDETADVLARLILAKTGCTVGTVDVPAVNLPRLTLRDVPVWQAME QLAHSCAMAHGQDMSHHALWLDDAGAIQYGPHNDEPEAVPVIATGAGLIAHNPAQSPKARGSVETFLLPGMRDGRLFKLQ DVRRGIDAEYRAVHVEHHIEQTKARTWLWYGGEYERF >Mature_276_residues SLQQNTIAGINVRVVIDGMVVARCPRCVVSFDRHTVTSYGEIDVPDPEGVLMQRVKPGQHVSVRFGYRGQPAREWTGLVD GWRPGFGRNRDQLTVQVLGPEFAPFMRTRVTEAYMDETADVLARLILAKTGCTVGTVDVPAVNLPRLTLRDVPVWQAMEQ LAHSCAMAHGQDMSHHALWLDDAGAIQYGPHNDEPEAVPVIATGAGLIAHNPAQSPKARGSVETFLLPGMRDGRLFKLQD VRRGIDAEYRAVHVEHHIEQTKARTWLWYGGEYERF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30856; Mature: 30724
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQQNTIAGINVRVVIDGMVVARCPRCVVSFDRHTVTSYGEIDVPDPEGVLMQRVKPGQ CCCCCCEECCEEEEEEECCHHHHHCCHHHEECCCCEECCCCCCCCCCCCCHHHHHCCCCC HVSVRFGYRGQPAREWTGLVDGWRPGFGRNRDQLTVQVLGPEFAPFMRTRVTEAYMDETA EEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH DVLARLILAKTGCTVGTVDVPAVNLPRLTLRDVPVWQAMEQLAHSCAMAHGQDMSHHALW HHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEE LDDAGAIQYGPHNDEPEAVPVIATGAGLIAHNPAQSPKARGSVETFLLPGMRDGRLFKLQ EECCCCEEECCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEHH DVRRGIDAEYRAVHVEHHIEQTKARTWLWYGGEYERF HHHCCCCCHHEEEHHHHHHHHHHCCEEEEECCCCCCC >Mature Secondary Structure SLQQNTIAGINVRVVIDGMVVARCPRCVVSFDRHTVTSYGEIDVPDPEGVLMQRVKPGQ CCCCCEECCEEEEEEECCHHHHHCCHHHEECCCCEECCCCCCCCCCCCCHHHHHCCCCC HVSVRFGYRGQPAREWTGLVDGWRPGFGRNRDQLTVQVLGPEFAPFMRTRVTEAYMDETA EEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH DVLARLILAKTGCTVGTVDVPAVNLPRLTLRDVPVWQAMEQLAHSCAMAHGQDMSHHALW HHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEE LDDAGAIQYGPHNDEPEAVPVIATGAGLIAHNPAQSPKARGSVETFLLPGMRDGRLFKLQ EECCCCEEECCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEHH DVRRGIDAEYRAVHVEHHIEQTKARTWLWYGGEYERF HHHCCCCCHHEEEHHHHHHHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA