| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358422
Identifier: 78358422
GI number: 78358422
Start: 3348397
End: 3350088
Strand: Direct
Name: 78358422
Synonym: Dde_3382
Alternate gene names: NA
Gene position: 3348397-3350088 (Clockwise)
Preceding gene: 78358421
Following gene: 78358423
Centisome position: 89.76
GC content: 61.35
Gene sequence:
>1692_bases ATGGCCCGTAAGGATGTATTTGAATTTCTGGTGGACGGCACCAGCGGCCTTGTTCCCGGCGATGTGAGCGGCAAGGCTCT TATTGTCGGTGTATGCAGCGCCGGGGAAGTGGGCAAGGTCTACTATCTGGGTAAGCGCAGCGATCTGACCGGCTTGCTGG GTACCGGCCCTCTGGTGGACCGCCTGCAGCATGTCTTTGCCACCGGCGGACAGGACAGCACTGTGCTGGCTGTTCCGGTG GCAGGGTCGCCCGGTGGAACCATCAGCACGCTCAAGCATACCGGCACTGGTCCCGAAGCCCGCGCCAGTGGCCTTCCCGG TGGCAATGCCGATGTGATTGCCGAAATAGTGGATGCCGGTGCTCCCGGCGTTGCCACGTGCAAGTTGAGCAAGGACGGCG GGGCAACATTCGGAGTGGCCGCCGCCGTGCCTGCCAATGGGCAGATCAGCGTTGCCGATACCGGTACCACCATCGTGCTG GCAGCAGGCAATCTAATGGCTGGCGACCGCTACCGCTACTCGGTGCGTGGTCCCATCGGCCCTGTTACCCGCATCGGTTT GGGGCCGGAGATCACTGCAGCGGGAACCGTAAAGGCCGGGGCCGAAGTGGTGCTGCAGATCGTCAAGGGCGGTGACCGCA ACGAAGGCCAGTATCGCCTTTCCGTGGATGGCGGCGACAATTTCGGCCCGTATCGCACCATCCCGGTGGATGGTCAGATT CCTGTGGCCGACACCGGCGTTACCATCACCTGTCCGGCAGGCGATTATCCGCTGGGTAGCACATACCAGTTCGACCTGCT TGCCCCGGTGCCCACCATCGCGGACGTTATCGACGCATTGACCATCCCGCTGGAAACAGTGGACCCGGAATTCGTCTATG TGGTCGGTCCGTCCGATTCCGTGGATTGGGCTGCCATGGGCGCACTGGCCGACGACCTTTGGAACCGCCACCGCCCTACG TTTTTTGTGTGTGAGGGCAGACTGCCCGCAGCCGGTGAAGACCTGAATGACTGGGTAACAGCCCTGAAGCAGGAGCGTAT GGGGTTTGCCCACCGTTTCGTCAGTGTGTGCGTGGGATTCGGCGAGATCAGCGACCGCACCGGCCTGCGCAAACTCCGCA ATGCCGGAGGACTGCTGGCCGGGCGTATCATGGAAGTACCCGTGCAGCGTGATATCGGCCGGGTGCGTGACCAGGGCATC ACCGGCATATCTCTGCCGGAAGGCTACACCGAGGCCATGCAGAGCGAACTGGAAGAAGCCGGGTACATCACGCTTACCCG GTACGCCGGGTTGCAGGCCGTCTACTGGGGAACAGCCCGGACCATGGCGGATTCCACCAGTGACTATCAGCGGCTTGAAG TGTTGCGTGTAACGTTCAAGGCTGTGCGCCTCATGCGTCTGCAAGCGCTCAAATCTCTGAAGGATGAACTGGGTGACCCG CTGCAGGGCGCAGACACCAGCGGTTTAGCCTATCTGCGGGCCAATCTCGAAAATGCGCTGGACACCATGGTCAAGGCCAA GCCCAAGGAACTGGCCGGGTATGCCGTCTCAATCCCCATGGATCAGGATTTCGTCAACAATGGCGTGGCCACGGAAACCA CCCTCATCGGCATCCCCATCATTGATACCATCAAACTGTTTTCGTCCTACGTCTACGCGGGCGGCAAATTCGATCCGCGC ATGGCGGCATAG
Upstream 100 bases:
>100_bases GCGCAGAGAGCTGGACGGACGACAAGTCCGTTACCAAAGCCGAATTTGATGCCGCAGTCACCCGGCTGCGCGAACGCCGT GTCGGCGGCGGGAGGTAGCC
Downstream 100 bases:
>100_bases GAGCTAGACCATGACAGCTAACGCAACCGTCACCGTCAACGGTGCCGTGCACGACTGGGAGAGCGTGAGCATCACCGGTC CTCATGGTGCCTTTGTCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVDRLQHVFATGGQDSTVLAVPV AGSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAGAPGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVL AAGNLMAGDRYRYSVRGPIGPVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQI PVADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDSVDWAAMGALADDLWNRHRPT FFVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGFGEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGI TGISLPEGYTEAMQSELEEAGYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDP LQGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPIIDTIKLFSSYVYAGGKFDPR MAA
Sequences:
>Translated_563_residues MARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVDRLQHVFATGGQDSTVLAVPV AGSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAGAPGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVL AAGNLMAGDRYRYSVRGPIGPVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQI PVADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDSVDWAAMGALADDLWNRHRPT FFVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGFGEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGI TGISLPEGYTEAMQSELEEAGYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDP LQGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPIIDTIKLFSSYVYAGGKFDPR MAA >Mature_562_residues ARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVDRLQHVFATGGQDSTVLAVPVA GSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAGAPGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVLA AGNLMAGDRYRYSVRGPIGPVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQIP VADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDSVDWAAMGALADDLWNRHRPTF FVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGFGEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGIT GISLPEGYTEAMQSELEEAGYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDPL QGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPIIDTIKLFSSYVYAGGKFDPRM AA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59051; Mature: 58920
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVD CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEECCCCHHHH RLQHVFATGGQDSTVLAVPVAGSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAG HHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHHHCC APGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVLAAGNLMAGDRYRYSVRGPIG CCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCEEECCCEEEEECCCCC PVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQI CHHEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCCCC PVADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDS CEECCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEECCCCEEEEECCCCC VDWAAMGALADDLWNRHRPTFFVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGF CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGITGISLPEGYTEAMQSELEEA CCCCCHHHHHHHHHCCCEEECHHEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC GYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDP CCEEEEECCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LQGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPI CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHCCCCCCCEEEEECCH IDTIKLFSSYVYAGGKFDPRMAA HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVD CHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEECCCCHHHH RLQHVFATGGQDSTVLAVPVAGSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAG HHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHHHCC APGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVLAAGNLMAGDRYRYSVRGPIG CCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCEEECCCEEEEECCCCC PVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQI CHHEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCCCC PVADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDS CEECCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEECCCCEEEEECCCCC VDWAAMGALADDLWNRHRPTFFVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGF CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGITGISLPEGYTEAMQSELEEA CCCCCHHHHHHHHHCCCEEECHHEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC GYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDP CCEEEEECCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LQGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPI CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHCCCCCCCEEEEECCH IDTIKLFSSYVYAGGKFDPRMAA HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA