| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78358419
Identifier: 78358419
GI number: 78358419
Start: 3347156
End: 3347647
Strand: Direct
Name: 78358419
Synonym: Dde_3379
Alternate gene names: NA
Gene position: 3347156-3347647 (Clockwise)
Preceding gene: 78358418
Following gene: 78358420
Centisome position: 89.73
GC content: 61.18
Gene sequence:
>492_bases ATGGCTGGTGCATCCTTCTCCATGCCCATGGACGGCCTGATGCGGGCCGTGGATGCGGGCATATCGCATGCCCAGCGCAC CCAGCAGCTGGCCGAGGCTATCGGCGAGGCGCTCGTTTCCAGTACGCACCAACGTTTTGAAGATCAGGAGCGCCCGGACG GTTCCAAATGGGAGCCATCACTCCGGGCCGGGAACGAAGGCGGCGTTACCCTGACGGACAAGGGAACTCTCAAAAAATCC ATAGGGTACGCAGCCAGTCCGGCCAAGGTCACGATCGGCACCAGCATGAAATATGCGGCCATCCATCAGCGCGGGGGAAC CATCAGGGGCAAGAAAGGCAAGCTCAAGTTCCCGTTGCCGGGTGGCGGCTTTGCCCAGGTTGATCAGGTAACGATACCTG AGCGTACCTACCTCGGCCTGTCCGGGGAAGACGTCAAGGAAGTGCGAGAGATGATGGTGCAGCACATGCGCCAGGCCCTG CTGGGTGGATGA
Upstream 100 bases:
>100_bases TGGGGCTGGATGAGCTGGGGCTGGAACCTTCGACAGGGGCCAACGGCACCCTGGCCGTGGTGACGCGTCCGGCAACACTG AACCTCAAGGGGTGGCGCTG
Downstream 100 bases:
>100_bases CAACCAATATGAGAAATTTCCTTTTCGACCAGATCATAGAGGCCGCCGCGGCTGCCGGAATACCGGAAGGGGCCGTGGTG CTGAATCCCGAAGATGCTGA
Product: Phage virion morphogenesis (putative tail completion) protein
Products: NA
Alternate protein names: Virion Morphogenesis Protein; Bacteriophage Protein
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAGASFSMPMDGLMRAVDAGISHAQRTQQLAEAIGEALVSSTHQRFEDQERPDGSKWEPSLRAGNEGGVTLTDKGTLKKS IGYAASPAKVTIGTSMKYAAIHQRGGTIRGKKGKLKFPLPGGGFAQVDQVTIPERTYLGLSGEDVKEVREMMVQHMRQAL LGG
Sequences:
>Translated_163_residues MAGASFSMPMDGLMRAVDAGISHAQRTQQLAEAIGEALVSSTHQRFEDQERPDGSKWEPSLRAGNEGGVTLTDKGTLKKS IGYAASPAKVTIGTSMKYAAIHQRGGTIRGKKGKLKFPLPGGGFAQVDQVTIPERTYLGLSGEDVKEVREMMVQHMRQAL LGG >Mature_162_residues AGASFSMPMDGLMRAVDAGISHAQRTQQLAEAIGEALVSSTHQRFEDQERPDGSKWEPSLRAGNEGGVTLTDKGTLKKSI GYAASPAKVTIGTSMKYAAIHQRGGTIRGKKGKLKFPLPGGGFAQVDQVTIPERTYLGLSGEDVKEVREMMVQHMRQALL GG
Specific function: Unknown
COG id: COG5005
COG function: function code R; Mu-like prophage protein gpG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17428; Mature: 17297
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGASFSMPMDGLMRAVDAGISHAQRTQQLAEAIGEALVSSTHQRFEDQERPDGSKWEPS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LRAGNEGGVTLTDKGTLKKSIGYAASPAKVTIGTSMKYAAIHQRGGTIRGKKGKLKFPLP CCCCCCCCEEEECCCCHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCEECCCC GGGFAQVDQVTIPERTYLGLSGEDVKEVREMMVQHMRQALLGG CCCCCCCCEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGASFSMPMDGLMRAVDAGISHAQRTQQLAEAIGEALVSSTHQRFEDQERPDGSKWEPS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LRAGNEGGVTLTDKGTLKKSIGYAASPAKVTIGTSMKYAAIHQRGGTIRGKKGKLKFPLP CCCCCCCCEEEECCCCHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCEECCCC GGGFAQVDQVTIPERTYLGLSGEDVKEVREMMVQHMRQALLGG CCCCCCCCEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA