| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358417
Identifier: 78358417
GI number: 78358417
Start: 3345622
End: 3346611
Strand: Direct
Name: 78358417
Synonym: Dde_3377
Alternate gene names: NA
Gene position: 3345622-3346611 (Clockwise)
Preceding gene: 78358416
Following gene: 78358418
Centisome position: 89.69
GC content: 59.9
Gene sequence:
>990_bases ATGTTTGATCTGAAGCCGTATTTTACCGCAGCTCGTATCGCCAGGCGGTTCGAGGCCGCTCCGCCTCTGACCACTACGGT CATGGACCTGCTGTTCCCGGCGGACGTGCGGGCGAACTATGAATCCCCCGTCATTCCTGTCTCCGACATCAAGCAGGTTG TAGGTGCCGTGCCGGTTGTGCGCCGTGGCAGTGCGTCCATTCCCTTGCGTGGCGAAGATACTGAGACCTCCTACATCGAA CCCCTGCCGGTGCGTATCCATGACGAGCTGAGCGCCGTGGATCTTAACAACCTCAAGATCGCCAGCCCCACCACGCTGGA GCAGTGGTCCAATCGCAAGCAGCTGGCTCTGCGAAGGGCGGCCCGCCTCACGTCGGAAGTTCTCTGCGCTCAGGCCGCCT TCGATGGCCGGATTGCTTATCCTCTGCTGCAGTCCAACGGCTCTTTCACCACGTATCAGGTGGATTACGGAGCTCCGCTC GATCATGCCTTGGCAGCCGCTGAGAAATGGGACCATGCCGATGCGAGTCTCATGATTGTGTACGAATTGTTGGAAGACAT GGCCACGGACCTCGACAAGGCCGGGTATGGCGGTTCCAAGATCACGTTTGCCGGGAGACTGGCTTTTTCCACGGTGCTCA AGCTCATTGAGGCCACCGACAAGCCCAAAATTCCCGTTCTGGTGGAAAAGGACGGCTCCATCTCGCTTGGTGGTCACACC ATCCGCAAGATGGCCGAAACCTACTATGACCCGTCCACCAAGACCACCAAGCCAAAGCTGGCCGACAAGGAAGTCCGCAT GATTGCCACCGGCAATACGGCCTTCTTCTACGGCCCCGTGGACGATCTGGACGCCAACCTGCACGCCATGCCCATGTTCA TCAAGCCCATCAAGCGGGACAACCCTTCCGGCATCCTGCTGGTCGGCGAATCCAAGCCGCTGCCGGCTGTCGCCCCCGAG GCCACGGTCAAGGCCACCGTCCTCGCGTAA
Upstream 100 bases:
>100_bases CGCCGACCTGCTCACCGTGTCCGGCGGCGCTGCACCGGATGCCGCAACCCTCGTCAAACTCGAAGAGCGCCACATCTACG CTGAGGAGAGTGTGTAGCCC
Downstream 100 bases:
>100_bases TCCCCCACTGTGCGAAGACCGCTCCAGAGGGCCTGAACAAGGCCCTCTGGATGTCGGGCCGAGTCGAACCTGTAACACTA GTTCAAAACTAGTTCAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVVRRGSASIPLRGEDTETSYIE PLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRAARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPL DHALAAAEKWDHADASLMIVYELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRDNPSGILLVGESKPLPAVAPE ATVKATVLA
Sequences:
>Translated_329_residues MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVVRRGSASIPLRGEDTETSYIE PLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRAARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPL DHALAAAEKWDHADASLMIVYELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRDNPSGILLVGESKPLPAVAPE ATVKATVLA >Mature_329_residues MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVVRRGSASIPLRGEDTETSYIE PLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRAARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPL DHALAAAEKWDHADASLMIVYELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRDNPSGILLVGESKPLPAVAPE ATVKATVLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35846; Mature: 35846
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVV CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCCCCE RRGSASIPLRGEDTETSYIEPLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRA ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCEEECCCCHHHHHCCHHHHHHHHH ARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPLDHALAAAEKWDHADASLMIV HHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHH YELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECHHH IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRD HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEEEECCHHCCCCCCEECHHEEEHHCCC NPSGILLVGESKPLPAVAPEATVKATVLA CCCEEEEEECCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVV CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCCCCE RRGSASIPLRGEDTETSYIEPLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRA ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCEEECCCCHHHHHCCHHHHHHHHH ARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPLDHALAAAEKWDHADASLMIV HHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHH YELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECHHH IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRD HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEEEECCHHCCCCCCEECHHEEEHHCCC NPSGILLVGESKPLPAVAPEATVKATVLA CCCEEEEEECCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA