| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358414
Identifier: 78358414
GI number: 78358414
Start: 3342921
End: 3344201
Strand: Direct
Name: 78358414
Synonym: Dde_3374
Alternate gene names: NA
Gene position: 3342921-3344201 (Clockwise)
Preceding gene: 78358413
Following gene: 78358415
Centisome position: 89.62
GC content: 60.81
Gene sequence:
>1281_bases ATGACCGTTGAGCCTGTAGCGCTGCCCCCCAAAGAGGCCCTTGCCTATTGGCAGGACAAGGTGTCCGTCACCCCGGAGGT GTTCAAGAACCTTTCCGGGCAGGCCCGCGCACGTGCCTTCGCCGTGTCGGGGCTGTCCCGGCAGGACCAGATAGCCGCCG TGCAACAGGCTGTCCATGAAGCCATGGCCAACGGGGAAACTCTCAAAGACTTCAAGGGGCGTATGGACGCCGTACTGGAG GGAGCCAGGCTGCCGCGCTGGCGGCTGGAGAACATCTACCGCACCAACGTACAGAGCGCCTACATGGCCGGGCGTTATGC ACAGATGCAGCGTACCACGGCTTTGCGTCCCTACTGGCGCTATGTGGCCGTGGCCGACAAACGCACCCGCCCGGATCATT TGGCGCTGCATGGGCTTGTCTATCCCCACGATCATAAATTCTGGAGCACCTATTATCCACCCAACGGCTTCGCCTGCCGC TGCACAGTGCAAACGCTTTCTGAGCGGCAGGCCAAGCAAAGCGGTGTGGAAATCCAGAAGGATATGCCGGACCTCATTGA GCCGGTGGACCCGCGCACAGGCAATCGTCTTCCGGCCCGTCGCCCGGTGCCCGATGCTGGCTTTGCGGGAAACGTGGGGC AAGACTGGTTACATGGACTCGCACCTTCGGAACTGGACGCCAAGATCAAAGACCTGCCTCTTCCCACGCTTTGCCGCACC GGCGGCACATCCTTTGCCGATCCACAAGCCGGTGCCCCGTGCAGGCCGCCACTGGCCTCATTGGCCAAGCGCCACATCCT GCCGGTTACGGCAAAGGACATTCTGCCCGGGGGCCTGAAGGCGGAAGAGTATGTGGCTGCCTTCCTCAAAGAGTTCAACC TTGCCGATATCAATGCCAGCGCTGTGCATACGATTCCGGGCGGTATCCCCGTCGTTATCGGCAAGGGATTGTTTATCGAC AAGAAAACAGGCGGTTGGAAAGTGCTGAAGAGTGGCCGTGAGCAATATCTGAAGCTGTTGGCCAGAACTGTCAAAGAACC GTGGGAGGTCTGGCAGGTGCCAGCGGAGGTGGCAGGAAAGCCTATGCCGGTGTTGCGGCTGATCAGGCTGTTCCGGGATG AGGAGGAAGCCAGGATTGGGGGCTTTGCCGTGTTCAATCTGGTGCGGGGCCGTGAATGGCAGGGAGCCACCACCTTTACC CCCAAGCTCGGCAACGAAGCTGCCATGCTCAAATACATGGAGCGCCAGCGGCAGGGAGCGCTGCTGTATCGCGAGCCCTA A
Upstream 100 bases:
>100_bases CTCGGCAAGTCCATGGACGAGGATGAGCAAGCCGCTTTCATGGGCGACCTGTTGACCAATGCGGACCTCTTCGGCCGTTA CGCCATGCAGAGCAAGTCCG
Downstream 100 bases:
>100_bases AAAAACAATGGCCCGGAAGAACCGGGCTTCCGAGCCTGCGACACCCTTGCTTCTACCCTCACCCGGACGAGGTTCAGGGT ACGCCGCATGAACTATCTGC
Product: Phage putative head morphogenesis protein, SPP1 gp7
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHEAMANGETLKDFKGRMDAVLE GARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWRYVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACR CTVQTLSERQAKQSGVEIQKDMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRT GGTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINASAVHTIPGGIPVVIGKGLFID KKTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGKPMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFT PKLGNEAAMLKYMERQRQGALLYREP
Sequences:
>Translated_426_residues MTVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHEAMANGETLKDFKGRMDAVLE GARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWRYVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACR CTVQTLSERQAKQSGVEIQKDMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRT GGTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINASAVHTIPGGIPVVIGKGLFID KKTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGKPMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFT PKLGNEAAMLKYMERQRQGALLYREP >Mature_425_residues TVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHEAMANGETLKDFKGRMDAVLEG ARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWRYVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACRC TVQTLSERQAKQSGVEIQKDMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRTG GTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINASAVHTIPGGIPVVIGKGLFIDK KTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGKPMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFTP KLGNEAAMLKYMERQRQGALLYREP
Specific function: Involved in virion morphogenesis [H]
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein F [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006528 [H]
Pfam domain/function: PF04233 Phage_Mu_F [H]
EC number: NA
Molecular weight: Translated: 47436; Mature: 47305
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHE CCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH AMANGETLKDFKGRMDAVLEGARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWR HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH YVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACRCTVQTLSERQAKQSGVEIQK HEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCHHH DMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRT CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHCCHHHCCCCCHHHHC GGTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINAS CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC AVHTIPGGIPVVIGKGLFIDKKTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGK EEEECCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHCCC PMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFTPKLGNEAAMLKYMERQRQGA CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHCCC LLYREP CEEECC >Mature Secondary Structure TVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHE CCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH AMANGETLKDFKGRMDAVLEGARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWR HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH YVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACRCTVQTLSERQAKQSGVEIQK HEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCHHH DMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRT CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHCCHHHCCCCCHHHHC GGTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINAS CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC AVHTIPGGIPVVIGKGLFIDKKTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGK EEEECCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHCCC PMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFTPKLGNEAAMLKYMERQRQGA CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHCCC LLYREP CEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]