Click here to switch to the map view.

The map label for this gene is phnM [H]

Identifier: 78358374

GI number: 78358374

Start: 3318437

End: 3319603

Strand: Direct

Name: phnM [H]

Synonym: Dde_3334

Alternate gene names: 78358374

Gene position: 3318437-3319603 (Clockwise)

Preceding gene: 78358373

Following gene: 78358375

Centisome position: 88.96

GC content: 61.01

Gene sequence:

>1167_bases
ATGACCGGAGAAGTCATATTCACCAACGCCAATGTGGTCACCCCGCAGGGAACCATATACGGCACCGTTGTCACCCGGGG
CGAAACCATTGCCGCCGTGGAAGAGGGCACCGTCCGCACCGGAGGGGTATGCAGCTGCGGCGGCAGCATGGTACGCGACG
TTGAAGGCGACTATATCATCCCCGGGCTTATTGAAATGCACACCGACCATCTGGAAACCCAGTTTCAGCCCCGTCCGGGC
GTGCTGTGGCCTTCGGCGCTTGCCGCACTGGTGGCGCACGACACACAGGTTGTCGGTTCCGGCATAACCACGGTGCTCGA
CTCCATATGCTGCGGCCAGCTGAATGAAGGCAAAATGCGGCACACCCTGCTGTCCATGTCGGTGGCGGCCATACGGGACG
CCCGCAGCAAAAATATTCTGCGGGCCGATCATCAGATGCATCTGCGTTGCGAAATATGCGACCCCTATGTCATGGAAATG
TTTGAACCGTATGCGGATGAGGCTATCCTGCGGCTTGTCTCGCTGATGGACCACACTCCCGGACAGCGGCAGTTCTGCGA
CTACGCCAAGTACCGCGAATACTACAAACAGGAAGACTGGACCGACGAGCAGTTTTCCGGACTGGTGGAAAAACTGAAAG
GCGAGCAGGAACGCAACGCCGCCGTCAACCGCTCCGTGATTCTGGCCATGTGCCACAGACGGGGCATACCCGTGGCCAGC
CACGACGATACCACCGAAGAACATGTGGCCGAGGCCGTGCGCGAAGGCATAACCATATCGGAATTTCCCACCACGGCCGC
AGCCGCGGCCAAATCTCGCGAGCTGGGGCTGGGTATTGTCATGGGCGCTCCCAATGTGGTGCGCGGCGGGTCACATTCCG
GTAACATATCCGCACGCGAACTGGCGGCACAGGGCCTGCTGGACATCCTTTCTTCCGACTATGTTCCCGCAAGCCTGCTG
CACGGCGCCTTCATGCTGCATCAGCAGGTCGGCATACCGCTGCATGAGGCGCTGGCCACGGTGACGGCCAACCCCGCTCG
TCTGCTCAGCCTGCACGACAGAGGCGAGATAGCAACCGGCAAACGCGCGGATATTGTCCGGGTGAAGCTGGTGGACGATG
TGCCCGTGGTGCGCACGGTATGGCGGGGCGGCAACCGCCTGCTGTAG

Upstream 100 bases:

>100_bases
AGGCACGCGGAACCGCCGTTGTGGGCATCTTTCATGATGACGACGTGCGCGGTGCCGTGGCCGACCGTGTTTTTGACATG
CAGACCATGGAGATGGCGGC

Downstream 100 bases:

>100_bases
ACGGCAGGCCGCAACCGCCCGACTGAATTGCACAGGGATAAACGCCGGAGACACACCATGACCGCACGTTATGCCATCTA
TTACCTGCCGCCGCGCCGCT

Product: amidohydrolase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTGEVIFTNANVVTPQGTIYGTVVTRGETIAAVEEGTVRTGGVCSCGGSMVRDVEGDYIIPGLIEMHTDHLETQFQPRPG
VLWPSALAALVAHDTQVVGSGITTVLDSICCGQLNEGKMRHTLLSMSVAAIRDARSKNILRADHQMHLRCEICDPYVMEM
FEPYADEAILRLVSLMDHTPGQRQFCDYAKYREYYKQEDWTDEQFSGLVEKLKGEQERNAAVNRSVILAMCHRRGIPVAS
HDDTTEEHVAEAVREGITISEFPTTAAAAAKSRELGLGIVMGAPNVVRGGSHSGNISARELAAQGLLDILSSDYVPASLL
HGAFMLHQQVGIPLHEALATVTANPARLLSLHDRGEIATGKRADIVRVKLVDDVPVVRTVWRGGNRLL

Sequences:

>Translated_388_residues
MTGEVIFTNANVVTPQGTIYGTVVTRGETIAAVEEGTVRTGGVCSCGGSMVRDVEGDYIIPGLIEMHTDHLETQFQPRPG
VLWPSALAALVAHDTQVVGSGITTVLDSICCGQLNEGKMRHTLLSMSVAAIRDARSKNILRADHQMHLRCEICDPYVMEM
FEPYADEAILRLVSLMDHTPGQRQFCDYAKYREYYKQEDWTDEQFSGLVEKLKGEQERNAAVNRSVILAMCHRRGIPVAS
HDDTTEEHVAEAVREGITISEFPTTAAAAAKSRELGLGIVMGAPNVVRGGSHSGNISARELAAQGLLDILSSDYVPASLL
HGAFMLHQQVGIPLHEALATVTANPARLLSLHDRGEIATGKRADIVRVKLVDDVPVVRTVWRGGNRLL
>Mature_387_residues
TGEVIFTNANVVTPQGTIYGTVVTRGETIAAVEEGTVRTGGVCSCGGSMVRDVEGDYIIPGLIEMHTDHLETQFQPRPGV
LWPSALAALVAHDTQVVGSGITTVLDSICCGQLNEGKMRHTLLSMSVAAIRDARSKNILRADHQMHLRCEICDPYVMEMF
EPYADEAILRLVSLMDHTPGQRQFCDYAKYREYYKQEDWTDEQFSGLVEKLKGEQERNAAVNRSVILAMCHRRGIPVASH
DDTTEEHVAEAVREGITISEFPTTAAAAAKSRELGLGIVMGAPNVVRGGSHSGNISARELAAQGLLDILSSDYVPASLLH
GAFMLHQQVGIPLHEALATVTANPARLLSLHDRGEIATGKRADIVRVKLVDDVPVVRTVWRGGNRLL

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=387, Percent_Identity=43.6692506459948, Blast_Score=305, Evalue=3e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 42230; Mature: 42099

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEVIFTNANVVTPQGTIYGTVVTRGETIAAVEEGTVRTGGVCSCGGSMVRDVEGDYII
CCCCEEEECCEEECCCCCEEEEEEECCCEEEEECCCCCCCCCEECCCCHHHHHCCCCEEC
PGLIEMHTDHLETQFQPRPGVLWPSALAALVAHDTQVVGSGITTVLDSICCGQLNEGKMR
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHH
HTLLSMSVAAIRDARSKNILRADHQMHLRCEICDPYVMEMFEPYADEAILRLVSLMDHTP
HHHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
GQRQFCDYAKYREYYKQEDWTDEQFSGLVEKLKGEQERNAAVNRSVILAMCHRRGIPVAS
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
HDDTTEEHVAEAVREGITISEFPTTAAAAAKSRELGLGIVMGAPNVVRGGSHSGNISARE
CCCCHHHHHHHHHHCCCEEECCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHH
LAAQGLLDILSSDYVPASLLHGAFMLHQQVGIPLHEALATVTANPARLLSLHDRGEIATG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCCCCCCCC
KRADIVRVKLVDDVPVVRTVWRGGNRLL
CCCCEEEEEEECCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TGEVIFTNANVVTPQGTIYGTVVTRGETIAAVEEGTVRTGGVCSCGGSMVRDVEGDYII
CCCEEEECCEEECCCCCEEEEEEECCCEEEEECCCCCCCCCEECCCCHHHHHCCCCEEC
PGLIEMHTDHLETQFQPRPGVLWPSALAALVAHDTQVVGSGITTVLDSICCGQLNEGKMR
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHH
HTLLSMSVAAIRDARSKNILRADHQMHLRCEICDPYVMEMFEPYADEAILRLVSLMDHTP
HHHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
GQRQFCDYAKYREYYKQEDWTDEQFSGLVEKLKGEQERNAAVNRSVILAMCHRRGIPVAS
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
HDDTTEEHVAEAVREGITISEFPTTAAAAAKSRELGLGIVMGAPNVVRGGSHSGNISARE
CCCCHHHHHHHHHHCCCEEECCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHH
LAAQGLLDILSSDYVPASLLHGAFMLHQQVGIPLHEALATVTANPARLLSLHDRGEIATG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCCCCCCCC
KRADIVRVKLVDDVPVVRTVWRGGNRLL
CCCCEEEEEEECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]