| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is phnI [H]
Identifier: 78358370
GI number: 78358370
Start: 3314716
End: 3315900
Strand: Direct
Name: phnI [H]
Synonym: Dde_3330
Alternate gene names: 78358370
Gene position: 3314716-3315900 (Clockwise)
Preceding gene: 78358369
Following gene: 78358371
Centisome position: 88.86
GC content: 61.77
Gene sequence:
>1185_bases ATGTATGTAGCAGTGAAAGGCGGCGAAAAAGCCATTGCCAGCGCACACCGGTATCTGGCCGCAGAACGCCGCGGCGATCC CGCAGTGCCGGAAATCAGCGTGGCCCAGATACGCGAACAGATGCGGCTGGCAGTGGACCGCGTCATGACCGAAGGCTCGC TGTATGATCCGGAACTGGCAGCACTGGCCCTTAAACAGGCCCGCGGCGATGCCATCGAGGCCATTTTTCTGCTGCGGGCC TACCGCACCACCCTGCCGCGGCTCTGCACCAGTCTGCCGCTGGAAACAACAGCCATGCAGCTCAGACGGCGGATTTCCGC AGCGTTCAAAGACATGCCCGGCGGACAGCTGCTGGGCCCCACCTTTGACTACACACACCGGCTGCTCGACTTTTCACTGG CAGACGGACAGGCAAACCGGCACGCCGCACCGCCTGCCCCGCTGCAGGCGGAACCGCTGCAGGAACCCCATGCGGAAACA CCGCGCATACTCGACTTTCTGCATGGCGACGGGCTGGTGGAAGCAGCCGGAAATCCTGACGCGCACCATGTGGGCGACAT AACACGCGAACCTCTGGAACTGCCTGCTGAACGCGATATCCGTCTGCAGAACCTCACCCGTGCCGACGAAGGTTTTTTAC TCGCCATGGGCTACTCCACCCAGCGCGGCTTCAAAAGCTCCGGGGGCCATCCTTTTGCCGGCGAAATACGCATGGGCAGC GTTGCCGTGCATGTGGTGCCCGAAGAACTGGGTTTCGCCGTCAACATAGGCGACATCACCGTTACCGAAAGCGAAATCGT CTCGCTGTACGACGGCAGCGAAGACACGCCGCCGGCCTTTACCAGAGGATACGGCATCACCTTCGGCAGCGGCGAACGCA AAGCCATTTCCATGGCGCTGGTGGACCGCGCTCTGCGCTGCCGCGAACTGCATGAAGATATCACCGCGCCCGCACAGGAT GAAGAATTTGTGCTGATGCACAGCGACAATGTTGAAGCCACAGGTTTTGTGGAGCACCTCAAGCTGCCGCATCATGTGGA CTTTCAGAGCGAGCTGGAAATACTGCGCCGCCTGCGCACCAACTGGGCGCAGAGCAAAGCCCGCAGAGAAGCGCGCGAAC AGGCGGCACAGCAGGCGGCACAGCAGGACAGCGCCAGCGCCGCCCTGCTGGAAGGAGCAGCATAA
Upstream 100 bases:
>100_bases CCAACGCCGCGCTGTTTCCGCAGGGAACAGACACCATCCTTGCCGCGCCCGAAGGAGTGCTCTGCCTTCCGCGCACGGTA CGCATACGGAGGCAGACAAC
Downstream 100 bases:
>100_bases TGACACAGTGCAACACCACAGCAGCAGGCGGCCCCCGGCTTGCGGCGCAGGGGTACAATTTCGCCTTTCTGGACGAACAG ACCAAGCGCATGGTGCGCCG
Product: phosphonate metabolism protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MYVAVKGGEKAIASAHRYLAAERRGDPAVPEISVAQIREQMRLAVDRVMTEGSLYDPELAALALKQARGDAIEAIFLLRA YRTTLPRLCTSLPLETTAMQLRRRISAAFKDMPGGQLLGPTFDYTHRLLDFSLADGQANRHAAPPAPLQAEPLQEPHAET PRILDFLHGDGLVEAAGNPDAHHVGDITREPLELPAERDIRLQNLTRADEGFLLAMGYSTQRGFKSSGGHPFAGEIRMGS VAVHVVPEELGFAVNIGDITVTESEIVSLYDGSEDTPPAFTRGYGITFGSGERKAISMALVDRALRCRELHEDITAPAQD EEFVLMHSDNVEATGFVEHLKLPHHVDFQSELEILRRLRTNWAQSKARREAREQAAQQAAQQDSASAALLEGAA
Sequences:
>Translated_394_residues MYVAVKGGEKAIASAHRYLAAERRGDPAVPEISVAQIREQMRLAVDRVMTEGSLYDPELAALALKQARGDAIEAIFLLRA YRTTLPRLCTSLPLETTAMQLRRRISAAFKDMPGGQLLGPTFDYTHRLLDFSLADGQANRHAAPPAPLQAEPLQEPHAET PRILDFLHGDGLVEAAGNPDAHHVGDITREPLELPAERDIRLQNLTRADEGFLLAMGYSTQRGFKSSGGHPFAGEIRMGS VAVHVVPEELGFAVNIGDITVTESEIVSLYDGSEDTPPAFTRGYGITFGSGERKAISMALVDRALRCRELHEDITAPAQD EEFVLMHSDNVEATGFVEHLKLPHHVDFQSELEILRRLRTNWAQSKARREAREQAAQQAAQQDSASAALLEGAA >Mature_394_residues MYVAVKGGEKAIASAHRYLAAERRGDPAVPEISVAQIREQMRLAVDRVMTEGSLYDPELAALALKQARGDAIEAIFLLRA YRTTLPRLCTSLPLETTAMQLRRRISAAFKDMPGGQLLGPTFDYTHRLLDFSLADGQANRHAAPPAPLQAEPLQEPHAET PRILDFLHGDGLVEAAGNPDAHHVGDITREPLELPAERDIRLQNLTRADEGFLLAMGYSTQRGFKSSGGHPFAGEIRMGS VAVHVVPEELGFAVNIGDITVTESEIVSLYDGSEDTPPAFTRGYGITFGSGERKAISMALVDRALRCRELHEDITAPAQD EEFVLMHSDNVEATGFVEHLKLPHHVDFQSELEILRRLRTNWAQSKARREAREQAAQQAAQQDSASAALLEGAA
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=364, Percent_Identity=59.6153846153846, Blast_Score=410, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 43137; Mature: 43137
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGEKAIASAHRYLAAERRGDPAVPEISVAQIREQMRLAVDRVMTEGSLYDPELA CEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH ALALKQARGDAIEAIFLLRAYRTTLPRLCTSLPLETTAMQLRRRISAAFKDMPGGQLLGP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC TFDYTHRLLDFSLADGQANRHAAPPAPLQAEPLQEPHAETPRILDFLHGDGLVEAAGNPD CHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCC AHHVGDITREPLELPAERDIRLQNLTRADEGFLLAMGYSTQRGFKSSGGHPFAGEIRMGS CHHCCCCCCCHHCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECC VAVHVVPEELGFAVNIGDITVTESEIVSLYDGSEDTPPAFTRGYGITFGSGERKAISMAL EEEEEEHHHHCCEEEECCEEECHHHHHEEECCCCCCCCCHHCCCCEEECCCCCHHHHHHH VDRALRCRELHEDITAPAQDEEFVLMHSDNVEATGFVEHLKLPHHVDFQSELEILRRLRT HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH NWAQSKARREAREQAAQQAAQQDSASAALLEGAA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure MYVAVKGGEKAIASAHRYLAAERRGDPAVPEISVAQIREQMRLAVDRVMTEGSLYDPELA CEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH ALALKQARGDAIEAIFLLRAYRTTLPRLCTSLPLETTAMQLRRRISAAFKDMPGGQLLGP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC TFDYTHRLLDFSLADGQANRHAAPPAPLQAEPLQEPHAETPRILDFLHGDGLVEAAGNPD CHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCC AHHVGDITREPLELPAERDIRLQNLTRADEGFLLAMGYSTQRGFKSSGGHPFAGEIRMGS CHHCCCCCCCHHCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECC VAVHVVPEELGFAVNIGDITVTESEIVSLYDGSEDTPPAFTRGYGITFGSGERKAISMAL EEEEEEHHHHCCEEEECCEEECHHHHHEEECCCCCCCCCHHCCCCEEECCCCCHHHHHHH VDRALRCRELHEDITAPAQDEEFVLMHSDNVEATGFVEHLKLPHHVDFQSELEILRRLRT HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH NWAQSKARREAREQAAQQAAQQDSASAALLEGAA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]