| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358341
Identifier: 78358341
GI number: 78358341
Start: 3288472
End: 3289434
Strand: Direct
Name: 78358341
Synonym: Dde_3301
Alternate gene names: NA
Gene position: 3288472-3289434 (Clockwise)
Preceding gene: 78358340
Following gene: 78358342
Centisome position: 88.16
GC content: 50.47
Gene sequence:
>963_bases ATGTCAGATGAACAGGACTGGCTGCCGGGCGGCAACGGCTATGACGACCTCAGAATAAATCTTCCTGCAGCTTACAGCAG ACAGGATGAAACATATAAGTCGGCCAAAAAGAACACTGTCCGAAAATCCTTTCTGCGCAACAAGCTGTCTTTTTTTACGA CCGCACTGCTGCAAAAGACCCGGTACATGGAACCGCTTGTCATGTGCGGTTTTGTAAAAAAATGGTTCACGGACTTTGAG GACTACTGGCGCAATGCCCTTAACGGCCGTCCCCTTTATATTGCCGATTTTCACGCCCTGCGTCACGCATACAGGCTGAA AGTCCAGAATCCTGCGGATTACCGATGGGACAGTCCTGACCTGCACCTTGCCAACTGGCAGAAGCCGCACAACATATACT CCACATTTTCTTACGTTTACGGGCTCGCATTGCGCCCCATACGCGCCTACAAAGCCTTCAGGCACCTGTCTGCGGGCATG CGCGCCCTTGAATTCGGCTGCTCACTCGCTCCGTACTACCGCACATGGAAAAACTATTATAACCATATCCCAGTATCATG GACACTTACGGATATCGCCAACTTTCCTTTCCATTATGCGCGCCATTTATACATGCGGGACGACGCCGTCACCGACATGC CGGTAATCTCTCCCGAAAAATTCGATCAGCCGCTTGAGGACGGAAAAGTCTACGACTTCATTGTCATCACCACTGTTTTT GAACACCTGCACAAACCCCTGACCATTGCCAGACATCTGCTGGACCATCTGGCGCCGGGCGGCATTTTTGTTTTTGATTA TATTCTCTCCGGTGAGGCGACAGAACTGGACACACCGGGCGGTGTCAAAGAACGGACAGAAACGCTTCAATTTCTGTCCG AAAACCTGACAATACTCTCCGGTTCACTTGACAACATCAATGAATCAGTAGGGCTGTGCATCGGACAGAAAAAGACGGGA TAG
Upstream 100 bases:
>100_bases GTAATGCAGAATAGTATAAAATTCTGCTGCGCCTCTTTTGCTACAGCGGCGGTAAAGCTGTTCCGGCCTCAAGCCGGCAA TTTTCAGTAAAGGAAACCTC
Downstream 100 bases:
>100_bases CACCGTAGTACACTCAACCAGCAGATAGAAAAACCGAGCTGCACCGACGGCAAAAACAGCAAACTCAGAACAGCGCTCCG TGCAATGCATGCTGCATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKTRYMEPLVMCGFVKKWFTDFE DYWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPDLHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGM RALEFGCSLAPYYRTWKNYYNHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVF EHLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILSGSLDNINESVGLCIGQKKTG
Sequences:
>Translated_320_residues MSDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKTRYMEPLVMCGFVKKWFTDFE DYWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPDLHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGM RALEFGCSLAPYYRTWKNYYNHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVF EHLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILSGSLDNINESVGLCIGQKKTG >Mature_319_residues SDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKTRYMEPLVMCGFVKKWFTDFED YWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPDLHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGMR ALEFGCSLAPYYRTWKNYYNHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVFE HLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILSGSLDNINESVGLCIGQKKTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37118; Mature: 36986
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKT CCCCCCCCCCCCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYMEPLVMCGFVKKWFTDFEDYWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCCC LHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGMRALEFGCSLAPYYRTWKNYY CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVF CCCCCEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHHHH EHLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILS HHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE GSLDNINESVGLCIGQKKTG CCHHHHHHHHHEEECCCCCC >Mature Secondary Structure SDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKT CCCCCCCCCCCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYMEPLVMCGFVKKWFTDFEDYWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCCC LHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGMRALEFGCSLAPYYRTWKNYY CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVF CCCCCEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHHHH EHLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILS HHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE GSLDNINESVGLCIGQKKTG CCHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA