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The map label for this gene is ydfL [H]

Identifier: 78358331

GI number: 78358331

Start: 3279069

End: 3279938

Strand: Direct

Name: ydfL [H]

Synonym: Dde_3291

Alternate gene names: 78358331

Gene position: 3279069-3279938 (Clockwise)

Preceding gene: 78358329

Following gene: 78358334

Centisome position: 87.91

GC content: 49.2

Gene sequence:

>870_bases
GTGAAGCAGCAGACGAAATATTCCATCGGCGATGTCAGCCAGATCTGCAACATCTCAAAAAAGGCGTTGCGCTATTATGA
CAAGATCGGCCTTATCACCTCGCAGCGTCAGGACTACAACAACTATCGCTACTATACGCACGAATCGCTTCTGGCTGTAC
CTGTAATCAAATATTACAAACAGATGGGCTTCAAGCTCGACGAAATGCGCGAATTTATCGAAGGCAGCACAGCCAACGTT
TACCGCGCCATCCGCAATTCTTTTCTTTCCAAAATTCAGGAGCTGGAAAAAGAGCAGGAAGAGATCAGACGCAAGCACAT
GTCTGTAAAAGACTGGTATGACCTGATTCTGGAAGCGGAGATGGTCATTGACAACAACATTCAGGAAGTTTCCATCAAGT
ATATTGAGCCGTCGCGGTATCTGTTTCTGAACCAGACATATGACACCAACATCAAGGCGGCCATCATCAACATAGACTTC
ACCAACTATGTGGAAAGCCTGAATAACGAAATAACAGGGCCGGTCATTCTCAACTTTTCCTCACATGCAGCCCGCATGAA
GGACAAAGAACAGCCCGTCAGGATACTGCAGAAAACCCTGATGCCCTGCCACGATGAATACACCACCGATATGGGCGGGC
ACATGATGGCGGCCTGCTACCACATCGGCCCGCACGAAGACATTGCCGAGACATACAAAAAGATACGCCGCTGGGCCCGT
CAGCACGGATACACGCTGGGCGATGAATCGTACGAACGCTATGTGACAGACTACTGGACAACCAGAAATTCCGCCAAATT
CGTCACCGAAATAATGATCAAGGCATCACGGCAGACAGTCGTCGTGCCGGAACAGGAAGACGAGCTCTGA

Upstream 100 bases:

>100_bases
AACGGTGAGTGATACCATTATAACTTGCCGTCTGCCGGAATTGCAGTGCGGTGCAATTTCATGCGACAAGCGCAGCGTCT
ACTGACAAGGAGAGCAGGCT

Downstream 100 bases:

>100_bases
TAACTTAAAGCCCGCACTGCTTGCGCAGTGCGGGCTTTTCTTTCTGCAGCCGCAGCACCCGTAACACCGCGTCCGCTTCT
TTTTCCACCATGTACAGACA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKQQTKYSIGDVSQICNISKKALRYYDKIGLITSQRQDYNNYRYYTHESLLAVPVIKYYKQMGFKLDEMREFIEGSTANV
YRAIRNSFLSKIQELEKEQEEIRRKHMSVKDWYDLILEAEMVIDNNIQEVSIKYIEPSRYLFLNQTYDTNIKAAIINIDF
TNYVESLNNEITGPVILNFSSHAARMKDKEQPVRILQKTLMPCHDEYTTDMGGHMMAACYHIGPHEDIAETYKKIRRWAR
QHGYTLGDESYERYVTDYWTTRNSAKFVTEIMIKASRQTVVVPEQEDEL

Sequences:

>Translated_289_residues
MKQQTKYSIGDVSQICNISKKALRYYDKIGLITSQRQDYNNYRYYTHESLLAVPVIKYYKQMGFKLDEMREFIEGSTANV
YRAIRNSFLSKIQELEKEQEEIRRKHMSVKDWYDLILEAEMVIDNNIQEVSIKYIEPSRYLFLNQTYDTNIKAAIINIDF
TNYVESLNNEITGPVILNFSSHAARMKDKEQPVRILQKTLMPCHDEYTTDMGGHMMAACYHIGPHEDIAETYKKIRRWAR
QHGYTLGDESYERYVTDYWTTRNSAKFVTEIMIKASRQTVVVPEQEDEL
>Mature_289_residues
MKQQTKYSIGDVSQICNISKKALRYYDKIGLITSQRQDYNNYRYYTHESLLAVPVIKYYKQMGFKLDEMREFIEGSTANV
YRAIRNSFLSKIQELEKEQEEIRRKHMSVKDWYDLILEAEMVIDNNIQEVSIKYIEPSRYLFLNQTYDTNIKAAIINIDF
TNYVESLNNEITGPVILNFSSHAARMKDKEQPVRILQKTLMPCHDEYTTDMGGHMMAACYHIGPHEDIAETYKKIRRWAR
QHGYTLGDESYERYVTDYWTTRNSAKFVTEIMIKASRQTVVVPEQEDEL

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind; PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 34179; Mature: 34179

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQTKYSIGDVSQICNISKKALRYYDKIGLITSQRQDYNNYRYYTHESLLAVPVIKYYK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHH
QMGFKLDEMREFIEGSTANVYRAIRNSFLSKIQELEKEQEEIRRKHMSVKDWYDLILEAE
HHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MVIDNNIQEVSIKYIEPSRYLFLNQTYDTNIKAAIINIDFTNYVESLNNEITGPVILNFS
HHHCCCCEEEEEEEECCCEEEEEECCCCCCEEEEEEEECHHHHHHHHCCCCCCCEEEECC
SHAARMKDKEQPVRILQKTLMPCHDEYTTDMGGHMMAACYHIGPHEDIAETYKKIRRWAR
HHHHHHCCCCHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
QHGYTLGDESYERYVTDYWTTRNSAKFVTEIMIKASRQTVVVPEQEDEL
HCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
>Mature Secondary Structure
MKQQTKYSIGDVSQICNISKKALRYYDKIGLITSQRQDYNNYRYYTHESLLAVPVIKYYK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHH
QMGFKLDEMREFIEGSTANVYRAIRNSFLSKIQELEKEQEEIRRKHMSVKDWYDLILEAE
HHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MVIDNNIQEVSIKYIEPSRYLFLNQTYDTNIKAAIINIDFTNYVESLNNEITGPVILNFS
HHHCCCCEEEEEEEECCCEEEEEECCCCCCEEEEEEEECHHHHHHHHCCCCCCCEEEECC
SHAARMKDKEQPVRILQKTLMPCHDEYTTDMGGHMMAACYHIGPHEDIAETYKKIRRWAR
HHHHHHCCCCHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
QHGYTLGDESYERYVTDYWTTRNSAKFVTEIMIKASRQTVVVPEQEDEL
HCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]