| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358283
Identifier: 78358283
GI number: 78358283
Start: 3239165
End: 3240226
Strand: Direct
Name: 78358283
Synonym: Dde_3243
Alternate gene names: NA
Gene position: 3239165-3240226 (Clockwise)
Preceding gene: 78358282
Following gene: 78358284
Centisome position: 86.84
GC content: 60.36
Gene sequence:
>1062_bases ATGAAGGGATTGTACATCGGTTCCACAGGCCCCTGGGCGGGCAAAAACCTTGCTGCCATGGCCGTCGGGCTGTGGCTGCA GCGTGAAGGTCTGCGTGTGGGCTACATGAAACCGCTGGGCGCCCGCCCCAAGACCGTGGACGAAATAGTCGGCGATGAAG ACGCCTTTTTCGTACAGGAGGTGCTGGGGCTGGAAGACGATCCCGCGCTGGTCACTCCCGTCATCACCCCTGCCAACCTG CGCACCTGCTCGCTGGCAGACCGGAAAAACGAAATGGAACGCGTCCGCGAAGCGTACGAGACATTGTCCCGGGGGCGGGA CATCATGCTCGTGGGCGGTTGCGGAGAATTCCTGCATTCCGGCAGACACGCCGGAATAAGCGGTCCCGCACTTGTGCGCC GGCTGGGGCTTAAGGCTCTGGTGGTGGACAGATACGACGGCGCGCTGCACTACGACGCGCTGCTGGGATACCGTGAAGTC CTCGGAGACGCTCTTGCGGGCGTGCTGTTCAACGATGTTCCCGAAGACTACCTGCGTGATGCAGAGGAAATGCTTGTGCC CTATCTTTCCGAGCACGGCATACCGGCCCTCGGCATTGTGCCGCGTGACAGGCTGCTCAACGCCATCAAGGCGGTGGAGC TGGCATGGCGGCTGGGCGGCAGGATAGTTTCCGGCAACAGGGAATCGGGCCGGATTGTGGAAGACTTCCTGATCGGCACC ATGCAGGTGGACAACTTCATGTCCCATTTCAAACAGCACGCAAACTCGGCCACCATCGTGGGCGGCGACCGGACGGATCT GCAGCTGGTGGCACTGGAAGGCCAGTGTCCCTGCCTTATTCTGACCGGCAACATCACCCCCGATGAAATCATCCGCACCC GATCCGAGGCGCGCGGGGTACCGGTTATCGTTGTCCGCGAAGACACATACACCGTTGCCCGCAAAATGGAAGAAATCCTT AACAGCCAGAAACTGCGGGAACTTGTAAAAATCCGCCGTGCCGCCCAGATGGTGGATAACACCATGGACTACCCCGCATT GAAGGCTCAACTCGGCTTCTAA
Upstream 100 bases:
>100_bases CAACCGGACCTGTGCCGCAAGGCATGACATAGACGCGGGGGCGGGGCTCCGGCAGCTCCGCCCCCTTTTTTCTTCCGGCA ACGGATGCAGAGAGACACAT
Downstream 100 bases:
>100_bases TTCAGGAGAACACCACATGTCCCAAGACCTGTCCCGGCTTATGCGTGAGAAAGCCGAACTGGTGGCTGCCACGGTGGCAG AGGTAAAATCCATCGAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQEVLGLEDDPALVTPVITPANL RTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHSGRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREV LGDALAGVLFNDVPEDYLRDAEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGVPVIVVREDTYTVARKMEEIL NSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF
Sequences:
>Translated_353_residues MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQEVLGLEDDPALVTPVITPANL RTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHSGRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREV LGDALAGVLFNDVPEDYLRDAEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGVPVIVVREDTYTVARKMEEIL NSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF >Mature_353_residues MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQEVLGLEDDPALVTPVITPANL RTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHSGRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREV LGDALAGVLFNDVPEDYLRDAEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGVPVIVVREDTYTVARKMEEIL NSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF1212 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 38879; Mature: 38879
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQE CCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCHHHHHHH VLGLEDDPALVTPVITPANLRTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHS HHCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHC GRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREVLGDALAGVLFNDVPEDYLRD CCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC AEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGV HHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCC PVIVVREDTYTVARKMEEILNSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQE CCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCHHHHHHH VLGLEDDPALVTPVITPANLRTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHS HHCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHC GRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREVLGDALAGVLFNDVPEDYLRD CCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC AEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGV HHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCC PVIVVREDTYTVARKMEEILNSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]