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The map label for this gene is ybhB [C]

Identifier: 78358269

GI number: 78358269

Start: 3218961

End: 3219422

Strand: Direct

Name: ybhB [C]

Synonym: Dde_3229

Alternate gene names: 78358269

Gene position: 3218961-3219422 (Clockwise)

Preceding gene: 78358268

Following gene: 78358273

Centisome position: 86.29

GC content: 60.17

Gene sequence:

>462_bases
ATGAAACTGAAAAGTCCCATATTCGAACAAGGTGAACTGCTGCCCGCGGCCAACCCGCAACACGGCGGAGAATCACCGCC
TCTTGCGTGGGAAGATGTGCCGGAAGGCACGGCATCTTTTGTGCTGCTGTGCGACGACCCCGATGCCGACGGCGGCACGG
CCACGCTGTGGATGCTGTATAATCTGCCCGCAGACCTGCGGTCGCTTGAGGCCGGCATCGCCGACGATTTTGCCCCGCTC
AAAGGGGCCGCTCACGGTATCAACACCAGAGGCAACTGTAGATACGATGCCCCGCAGCCATCCTGTCATCCCAGACGGGT
ATACTACAGGCTGTATGCGCTTGACAGCCGCCTTTCGCTGAAGGCGGGCATTGCACGGGGGCAGCTGGTACGCGCCATGG
AAGGCCATATTATTTCCGAAGCGAGTCTGACAACCGTGGTCGGCAGCGCCCATACCGCATAA

Upstream 100 bases:

>100_bases
CGCCCGCTTTTCTGGCACGCATAGAAGCGCTGGGCGGATACGAGACAACACTCACCGGACAGGTCATGCAGGCCGGTACC
GCACTGGGAGAACACGGCAG

Downstream 100 bases:

>100_bases
ATCCTGCGGCAGCTGGCGCAGAACCTGCGGCCGGATACGCGTCCGGAAAAACAGCCGGTGAACGCACCACGGAATGAGAT
AAAAAAAAGCCGCCGGTCAT

Product: PBP family phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKLKSPIFEQGELLPAANPQHGGESPPLAWEDVPEGTASFVLLCDDPDADGGTATLWMLYNLPADLRSLEAGIADDFAPL
KGAAHGINTRGNCRYDAPQPSCHPRRVYYRLYALDSRLSLKAGIARGQLVRAMEGHIISEASLTTVVGSAHTA

Sequences:

>Translated_153_residues
MKLKSPIFEQGELLPAANPQHGGESPPLAWEDVPEGTASFVLLCDDPDADGGTATLWMLYNLPADLRSLEAGIADDFAPL
KGAAHGINTRGNCRYDAPQPSCHPRRVYYRLYALDSRLSLKAGIARGQLVRAMEGHIISEASLTTVVGSAHTA
>Mature_153_residues
MKLKSPIFEQGELLPAANPQHGGESPPLAWEDVPEGTASFVLLCDDPDADGGTATLWMLYNLPADLRSLEAGIADDFAPL
KGAAHGINTRGNCRYDAPQPSCHPRRVYYRLYALDSRLSLKAGIARGQLVRAMEGHIISEASLTTVVGSAHTA

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=156, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 16383; Mature: 16383

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKSPIFEQGELLPAANPQHGGESPPLAWEDVPEGTASFVLLCDDPDADGGTATLWMLY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEE
NLPADLRSLEAGIADDFAPLKGAAHGINTRGNCRYDAPQPSCHPRRVYYRLYALDSRLSL
CCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCH
KAGIARGQLVRAMEGHIISEASLTTVVGSAHTA
HHCCCHHHHHHHHHCCEECCCHHEEEECCCCCC
>Mature Secondary Structure
MKLKSPIFEQGELLPAANPQHGGESPPLAWEDVPEGTASFVLLCDDPDADGGTATLWMLY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEE
NLPADLRSLEAGIADDFAPLKGAAHGINTRGNCRYDAPQPSCHPRRVYYRLYALDSRLSL
CCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCH
KAGIARGQLVRAMEGHIISEASLTTVVGSAHTA
HHCCCHHHHHHHHHCCEECCCHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]