| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358238
Identifier: 78358238
GI number: 78358238
Start: 3188132
End: 3188491
Strand: Direct
Name: 78358238
Synonym: Dde_3198
Alternate gene names: NA
Gene position: 3188132-3188491 (Clockwise)
Preceding gene: 78358237
Following gene: 78358239
Centisome position: 85.47
GC content: 61.39
Gene sequence:
>360_bases ATGATCATTGCCATCAGCGCTTCCGGACAGTCTCCGGAAAGCGGACTGGATCCCCGTTTCGGCAGAGCCGCAGGGTTTGT GCTGTTTAACAGCGAAACCGGACAGTTCAGCTACAAGGACAACACCCAGAATCTGAACGCCCCGCAGGGAGCAGGCATTC AGGCCGCCATGAACGTGGCCGATGCCGGAGCTTCGGCTGTCATCACCGGCCATGTGGGCCCCAAGGCATTTCAGGCTCTG CAGCAGGGCAACGTGGCGGTGTACCTGACCGACAGCCCCACCGTGCATGATGCTCTGGAGGCTTTCCGGCAGGGTATGCT CCGCCCCGCCGATCAGGCCGACAAACAGGGCCACTGGTAA
Upstream 100 bases:
>100_bases ATCTAGGGCCGCACATCATGCCCGGCTGCCCGCGCATCCAGCAGCCGCGCTGCCGCGCCAGACAGGGGCAGACAAAACAA ACCGTAAAAAGGAGCACCAC
Downstream 100 bases:
>100_bases CCGGCGGTCGCACGGCCGCCGCAAGGAGGTCATCATGACAACCATCATTGACGCACGCGGCATGGGCCGCGGTATGGGCC GCAGAGGTCTGTACGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; Dinitrogenase Iron-Molybdenum Cofactor Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MIIAISASGQSPESGLDPRFGRAAGFVLFNSETGQFSYKDNTQNLNAPQGAGIQAAMNVADAGASAVITGHVGPKAFQAL QQGNVAVYLTDSPTVHDALEAFRQGMLRPADQADKQGHW
Sequences:
>Translated_119_residues MIIAISASGQSPESGLDPRFGRAAGFVLFNSETGQFSYKDNTQNLNAPQGAGIQAAMNVADAGASAVITGHVGPKAFQAL QQGNVAVYLTDSPTVHDALEAFRQGMLRPADQADKQGHW >Mature_119_residues MIIAISASGQSPESGLDPRFGRAAGFVLFNSETGQFSYKDNTQNLNAPQGAGIQAAMNVADAGASAVITGHVGPKAFQAL QQGNVAVYLTDSPTVHDALEAFRQGMLRPADQADKQGHW
Specific function: Unknown
COG id: COG1433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12444; Mature: 12444
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIAISASGQSPESGLDPRFGRAAGFVLFNSETGQFSYKDNTQNLNAPQGAGIQAAMNVA CEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHEEHHHC DAGASAVITGHVGPKAFQALQQGNVAVYLTDSPTVHDALEAFRQGMLRPADQADKQGHW CCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIIAISASGQSPESGLDPRFGRAAGFVLFNSETGQFSYKDNTQNLNAPQGAGIQAAMNVA CEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHEEHHHC DAGASAVITGHVGPKAFQALQQGNVAVYLTDSPTVHDALEAFRQGMLRPADQADKQGHW CCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA