| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78358223
Identifier: 78358223
GI number: 78358223
Start: 3170427
End: 3173021
Strand: Direct
Name: 78358223
Synonym: Dde_3183
Alternate gene names: NA
Gene position: 3170427-3173021 (Clockwise)
Preceding gene: 78358222
Following gene: 78358224
Centisome position: 84.99
GC content: 62.62
Gene sequence:
>2595_bases ATGTCACCACAGGGCCCCCTGCACGAAGAAGACGATATCATCGAACTGACGGAAATCGTCGAAAAAGGATCTGTTCCCGG CAGTACGGACAGCGATGCCGCTGATTTTGAAAAAGAGCTGGAAGACCTGCTGGATAACGATGCGGGTCTTGATTCCATCG AAGGCTTCGATGATCTGGAGATCGACAGCGGCACCACCCCGTCCGCAAGGAAACCCGCAGACGATGAAGACGATATAGAT GCCCTGCTGAATGATCTGGAACAGGACGCCCCCTCTGCCGGCAGCGCCGGTTCAGCATCAGGAGGTTCACCCGTGGTCGA CCCCAACGAAGAACTGCAGATGCCTGACATGTCTGACATGGATGATCTTCTGGGCGATGTGGGTGCTCCCGCACCCTCGC AGGATGACGATCTGGATGATCTGGATGCCCTGCTGAACGGAGCCATGGACGAAGCGGTGCAGGACACCGCGCAAAAAGAA CAACCTGCCGCGCCGGATTCAGGCACCGGCGATGAAACGGACGCGCCCGACATCGACGATCTGGATGCGCTTATCGAACA GGCATCAGCAGCCGCACCGCAGCAGCCGCAGGCACCCGCCGCACAGAAAAAAGATGATCCGCTTTCCGCCGACGACATTG ACGCCCTGCTGGAACAGGCTTCCGCCGGAACGCAGCAGAACGCGGCGGCTCCCGAAGCAGAAAACGCCGCTAACGGCGGC GGGGCTGACGATGATGCCGGTGCGCCCGACATCGACGATCTGGACGCGCTTATCGAGCAGGCTGCCGCAGCCGTGCCGGA GCAGCCGCAGACACCCGCCGCACAGAAAAATGATGATCCGCTTTCCGCCGACGACATCGACGCCCTGCTGGAACAGGCTT CCGCCGGAACGCAGCAGAACGCGGCGGCTCCCGAAGCAGAAGACGCCGGTACCGGCGGCGGAGCCGACGATGATGCCGGT GCGCCCGACATCGACGATCTGGACGCGCTTATCGAACAGGCTGCCGCAGCCGTGCCGGAGCAGCCGCAGACACCCGCCGC GCAGAAAAGCAATGATCCGCTTTCCGCCGACGACATCGACGCTCTGCTGGAACAGGCTTCCGCCGGAACGCAGCAGAATG CGGCGGCTCCCGAAGCAGAAGACGCCGCTAACGGCGGCGGAGCTGACGATGATGCCGGTGCGCCCGACATCGACGATCTG GACGCGCTTATCGAACAGGCTGCCGCAGCCGTGCCGGAGCAGCCGCAGACACCCGCCGCACAGAAAAACGATGATCCGCT TTCCGCCGACGACATCGACGCCCTGCTGGAACAGGCTTCCGCCGGAACGCAGCAGAACGCGGCGGCTCCCGAAGCAGAAG ACGCCGCTAACGGCGGCGGGGCTGACGATGATGCCGGTGCGCCCGACATCGACGATCTGGATGCGCTTATCGGGCAGGCT TCCGCCGGTGTCGAAGAACCTGAAGATACCGCACATCTTGATGAAATAGGTGCATTGATAGACGATATACAGCCGCCCGA CACCCAGCCCGCCCAATCTGCAGCGCAGGAAGCTGCCGCCGGCAAGCAGGAAATGCCGCTGGACGATCTGGACGATGTGC TTGATCAGGTAATGGGCAGCGCACACGACGCAGCCCCGCAGGCAACCGTTGCGGCAGAGGAAGAAGGGGACGCCGCCCCC GCACAGCCTGCAGCTGAACAGCATAACGCAACAGCAGAAATGCCGTCCGGAACGGAAGAGGCTGGCCCGCAAGAGTCGAG AACAGAAGAGTCGGAAACAGAAGAGGCCGGCGCGGAACCGGCAGGCACCGTGACACCGGACACGGAGCTGCCCGAAGAAG TGATACCTGAAGCCGTAGTGCCCGACACAGAAATGCCCGAAACAGGAATGCCCGGCAGAGCCGGTTCCGAAGACATGCAG CCCGAAAATTTGCAGCCGCAGGATTCGCCGCCTGAAGAAACCGCATCAGACGAAGTGTTGCCACAGGATGAAGCCACCGG AGCAGCAAAGGATGATACCCCTGCTCATGATGCTGGTTCTGCCGCAGGACATGGCGAAACAGCAGGCGAAACCGCAGGCG AAACCCGTCAGCCCCCCGCGGCTGAAGCCGAGGAACCGGAGCCAGAGCAGACGGCCGGACATGAGGCCGCCTCTCCCGCC GCAGCTGCTCCCGCCGCAGCCCCTCTGCCCCAGCTCATGCTGCTTGAAGAACGCATAGCCGCGCTGGAAACAGCCGCGGC AGAGCCGGAAGTGCAGGAACCCGTGCAGGACGTCGTGGAGCGTCTGCTGGGCGAAGACAGTCCTGTTTTCCGCAGTCTGC TTGCCGCGGCAACGGAAAGCGCCGTGGCCGCTGTCCGCCCGCTTTACGAAGAACGTCTGGCCGCGCTTGAAGAGCAGCTG GCCCGCATGGACAAAGACGACGCAGCATTCGCTGCGCGACTGGATGAAATCGAACTTGCCGGCCGGCCCGACACCGAAGC CATAGTGCACACGGTTTCCGAACAGCTTTCGGCACAGCTGGAAGCCACTGCCAGCGAAGCCGCCGCCAAGGTTCTGCGCG AAGAAATAGCAGCGCTTGCCAGAGAACTGGAATAA
Upstream 100 bases:
>100_bases GTATGCTTATCTTTTTGACGATACAGATTGTTGCTGTTTTCCGCTCCGCGGCGCTCCGGCAGCCGGACGGATACCCTCAA CCTCAGATTGAAGGTACGCC
Downstream 100 bases:
>100_bases GGGCGGCAACACAGATATCCCGACGCGGAACCGGCTCTGCCGGTTCCGCGTTATTGTATGCGCGGGGCGTCGCTGTTTCT CCTCGACGTTCATACCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 864; Mature: 863
Protein sequence:
>864_residues MSPQGPLHEEDDIIELTEIVEKGSVPGSTDSDAADFEKELEDLLDNDAGLDSIEGFDDLEIDSGTTPSARKPADDEDDID ALLNDLEQDAPSAGSAGSASGGSPVVDPNEELQMPDMSDMDDLLGDVGAPAPSQDDDLDDLDALLNGAMDEAVQDTAQKE QPAAPDSGTGDETDAPDIDDLDALIEQASAAAPQQPQAPAAQKKDDPLSADDIDALLEQASAGTQQNAAAPEAENAANGG GADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAAQKNDDPLSADDIDALLEQASAGTQQNAAAPEAEDAGTGGGADDDAG APDIDDLDALIEQAAAAVPEQPQTPAAQKSNDPLSADDIDALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDL DALIEQAAAAVPEQPQTPAAQKNDDPLSADDIDALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDLDALIGQA SAGVEEPEDTAHLDEIGALIDDIQPPDTQPAQSAAQEAAAGKQEMPLDDLDDVLDQVMGSAHDAAPQATVAAEEEGDAAP AQPAAEQHNATAEMPSGTEEAGPQESRTEESETEEAGAEPAGTVTPDTELPEEVIPEAVVPDTEMPETGMPGRAGSEDMQ PENLQPQDSPPEETASDEVLPQDEATGAAKDDTPAHDAGSAAGHGETAGETAGETRQPPAAEAEEPEPEQTAGHEAASPA AAAPAAAPLPQLMLLEERIAALETAAAEPEVQEPVQDVVERLLGEDSPVFRSLLAAATESAVAAVRPLYEERLAALEEQL ARMDKDDAAFAARLDEIELAGRPDTEAIVHTVSEQLSAQLEATASEAAAKVLREEIAALARELE
Sequences:
>Translated_864_residues MSPQGPLHEEDDIIELTEIVEKGSVPGSTDSDAADFEKELEDLLDNDAGLDSIEGFDDLEIDSGTTPSARKPADDEDDID ALLNDLEQDAPSAGSAGSASGGSPVVDPNEELQMPDMSDMDDLLGDVGAPAPSQDDDLDDLDALLNGAMDEAVQDTAQKE QPAAPDSGTGDETDAPDIDDLDALIEQASAAAPQQPQAPAAQKKDDPLSADDIDALLEQASAGTQQNAAAPEAENAANGG GADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAAQKNDDPLSADDIDALLEQASAGTQQNAAAPEAEDAGTGGGADDDAG APDIDDLDALIEQAAAAVPEQPQTPAAQKSNDPLSADDIDALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDL DALIEQAAAAVPEQPQTPAAQKNDDPLSADDIDALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDLDALIGQA SAGVEEPEDTAHLDEIGALIDDIQPPDTQPAQSAAQEAAAGKQEMPLDDLDDVLDQVMGSAHDAAPQATVAAEEEGDAAP AQPAAEQHNATAEMPSGTEEAGPQESRTEESETEEAGAEPAGTVTPDTELPEEVIPEAVVPDTEMPETGMPGRAGSEDMQ PENLQPQDSPPEETASDEVLPQDEATGAAKDDTPAHDAGSAAGHGETAGETAGETRQPPAAEAEEPEPEQTAGHEAASPA AAAPAAAPLPQLMLLEERIAALETAAAEPEVQEPVQDVVERLLGEDSPVFRSLLAAATESAVAAVRPLYEERLAALEEQL ARMDKDDAAFAARLDEIELAGRPDTEAIVHTVSEQLSAQLEATASEAAAKVLREEIAALARELE >Mature_863_residues SPQGPLHEEDDIIELTEIVEKGSVPGSTDSDAADFEKELEDLLDNDAGLDSIEGFDDLEIDSGTTPSARKPADDEDDIDA LLNDLEQDAPSAGSAGSASGGSPVVDPNEELQMPDMSDMDDLLGDVGAPAPSQDDDLDDLDALLNGAMDEAVQDTAQKEQ PAAPDSGTGDETDAPDIDDLDALIEQASAAAPQQPQAPAAQKKDDPLSADDIDALLEQASAGTQQNAAAPEAENAANGGG ADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAAQKNDDPLSADDIDALLEQASAGTQQNAAAPEAEDAGTGGGADDDAGA PDIDDLDALIEQAAAAVPEQPQTPAAQKSNDPLSADDIDALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDLD ALIEQAAAAVPEQPQTPAAQKNDDPLSADDIDALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDLDALIGQAS AGVEEPEDTAHLDEIGALIDDIQPPDTQPAQSAAQEAAAGKQEMPLDDLDDVLDQVMGSAHDAAPQATVAAEEEGDAAPA QPAAEQHNATAEMPSGTEEAGPQESRTEESETEEAGAEPAGTVTPDTELPEEVIPEAVVPDTEMPETGMPGRAGSEDMQP ENLQPQDSPPEETASDEVLPQDEATGAAKDDTPAHDAGSAAGHGETAGETAGETRQPPAAEAEEPEPEQTAGHEAASPAA AAPAAAPLPQLMLLEERIAALETAAAEPEVQEPVQDVVERLLGEDSPVFRSLLAAATESAVAAVRPLYEERLAALEEQLA RMDKDDAAFAARLDEIELAGRPDTEAIVHTVSEQLSAQLEATASEAAAKVLREEIAALARELE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87904; Mature: 87773
Theoretical pI: Translated: 3.28; Mature: 3.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQGPLHEEDDIIELTEIVEKGSVPGSTDSDAADFEKELEDLLDNDAGLDSIEGFDDLE CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCC IDSGTTPSARKPADDEDDIDALLNDLEQDAPSAGSAGSASGGSPVVDPNEELQMPDMSDM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DDLLGDVGAPAPSQDDDLDDLDALLNGAMDEAVQDTAQKEQPAAPDSGTGDETDAPDIDD HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH LDALIEQASAAAPQQPQAPAAQKKDDPLSADDIDALLEQASAGTQQNAAAPEAENAANGG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCC GADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAAQKNDDPLSADDIDALLEQASAGTQQN CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC AAAPEAEDAGTGGGADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAAQKSNDPLSADDID CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH ALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAA HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC QKNDDPLSADDIDALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDLDALIGQA CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHH SAGVEEPEDTAHLDEIGALIDDIQPPDTQPAQSAAQEAAAGKQEMPLDDLDDVLDQVMGS HCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC AHDAAPQATVAAEEEGDAAPAQPAAEQHNATAEMPSGTEEAGPQESRTEESETEEAGAEP HHHCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCC AGTVTPDTELPEEVIPEAVVPDTEMPETGMPGRAGSEDMQPENLQPQDSPPEETASDEVL CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC PQDEATGAAKDDTPAHDAGSAAGHGETAGETAGETRQPPAAEAEEPEPEQTAGHEAASPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCH AAAPAAAPLPQLMLLEERIAALETAAAEPEVQEPVQDVVERLLGEDSPVFRSLLAAATES HCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AVAAVRPLYEERLAALEEQLARMDKDDAAFAARLDEIELAGRPDTEAIVHTVSEQLSAQL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EATASEAAAKVLREEIAALARELE HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPQGPLHEEDDIIELTEIVEKGSVPGSTDSDAADFEKELEDLLDNDAGLDSIEGFDDLE CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCC IDSGTTPSARKPADDEDDIDALLNDLEQDAPSAGSAGSASGGSPVVDPNEELQMPDMSDM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DDLLGDVGAPAPSQDDDLDDLDALLNGAMDEAVQDTAQKEQPAAPDSGTGDETDAPDIDD HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH LDALIEQASAAAPQQPQAPAAQKKDDPLSADDIDALLEQASAGTQQNAAAPEAENAANGG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCC GADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAAQKNDDPLSADDIDALLEQASAGTQQN CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC AAAPEAEDAGTGGGADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAAQKSNDPLSADDID CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH ALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDLDALIEQAAAAVPEQPQTPAA HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC QKNDDPLSADDIDALLEQASAGTQQNAAAPEAEDAANGGGADDDAGAPDIDDLDALIGQA CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHH SAGVEEPEDTAHLDEIGALIDDIQPPDTQPAQSAAQEAAAGKQEMPLDDLDDVLDQVMGS HCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC AHDAAPQATVAAEEEGDAAPAQPAAEQHNATAEMPSGTEEAGPQESRTEESETEEAGAEP HHHCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCC AGTVTPDTELPEEVIPEAVVPDTEMPETGMPGRAGSEDMQPENLQPQDSPPEETASDEVL CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC PQDEATGAAKDDTPAHDAGSAAGHGETAGETAGETRQPPAAEAEEPEPEQTAGHEAASPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCH AAAPAAAPLPQLMLLEERIAALETAAAEPEVQEPVQDVVERLLGEDSPVFRSLLAAATES HCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AVAAVRPLYEERLAALEEQLARMDKDDAAFAARLDEIELAGRPDTEAIVHTVSEQLSAQL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EATASEAAAKVLREEIAALARELE HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA