| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is ygaZ [C]
Identifier: 78358216
GI number: 78358216
Start: 3163527
End: 3164324
Strand: Direct
Name: ygaZ [C]
Synonym: Dde_3176
Alternate gene names: 78358216
Gene position: 3163527-3164324 (Clockwise)
Preceding gene: 78358215
Following gene: 78358217
Centisome position: 84.81
GC content: 61.9
Gene sequence:
>798_bases ATGCCGCGGCAGACTTTTTTCTGCCAATACATACACACGGAAGGATATCCGTTGCAGCCTTCATCCCCGCCATCCCCTTC ATCCCCGCTGCCCGCTCCGTTTTCCCAGCTGCAAAAAGGCTTTGCCGCCAACCTCGTCGTGGCGGCCAGCGTAGCCGCTT ACGGCAGCGTTTTCGGCCTGCTGGCAGCCCAGAAAGGTATCGGCTGGGGGCAGCTGCTGTTCATGAACCTGACCATCTTT GCCGGGTCTGCACAGTTTGTCATGGTGGATATGTGGCAACCGCCCCTGCCGGTGGCGGAAATAGCGCTGGCGGTTCTGGT CATCAACACACGCTATCTGCTCATCGGGGCATCACTGCGTCAGCTTTTTGCCGGAACCACACTGACCCACAAGGCTCTTG TCATGCATCTGGTCACCGACGAAAACTGGGCCGTCACGCTGGCTGCGGCCTCAAAGCGTCCCGTGGACACATACTTCATG CTCGGCGGCGGCCTGTGCATTCTGATGGCATGGTGTGCCGGTTCGCTGTTCGGCAATCAGGTGGGGGCGTTGCTGGGCAA CCCCGAGCGCCTGGGGCTTGATTTCGCGTTTACAGCCGTGTTCACCGCACTGCTGTGCAGCTTCTGGCGGGGCGGCAGAG ACCTGCTGCCGTGGCTGACTGCCGCGGCCGTGGCTCTGGTTGTGGAACAGGCTGTTCCCGGCAGCAAATGGTACATACCC GCCGGAGGCCTGAGCGGCGCCCTGTGCGCCGCGCTGATGCCCGCACACGCGGCGGGAAAGGACAGAAAGCAGACATGA
Upstream 100 bases:
>100_bases ACGGCCCGCGGCAACGCACGGTATGGGTGCAGTTCATGGCCGGCAGCTGACAGCTGTCCCGCTGCGATAATCCCCTGCCG CAGCATGCTCTTATCCGCTC
Downstream 100 bases:
>100_bases CGGAAAACACCGCGGCCTTTCTGGCCGTCATACTGGCTGCGGCAGCCACCTACGCCCTGCGCCTCGGTGGGCTGCTGCTG GCAGGCAAACTTCCGGATAC
Product: branched-chain amino acid permease (azaleucine resistance)-like
Products: NA
Alternate protein names: Branched-Chain Amino Acid Permease; Branched-Chain Amino Acid Transport Protein AzlC; AzlC Protein; AzlC-Like; AzlC Family Branched-Chain Amino Acid Transporter; AzlC-Like Protein; Branched-Chain Amino Acid Permease Protein; Branched-Chain Amino Acid Transporter Protein; Branched Chain Amino Acid ABC Transporter; Transport Protein-Like Protein; Branched-Chain Amino Acid Permease-Like; Azaleucine Resistance Protein AzlC; Branched Chain Amino Acid Exporter Family Protein; Integral Membrane Protein; Amino Acid Permease
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPRQTFFCQYIHTEGYPLQPSSPPSPSSPLPAPFSQLQKGFAANLVVAASVAAYGSVFGLLAAQKGIGWGQLLFMNLTIF AGSAQFVMVDMWQPPLPVAEIALAVLVINTRYLLIGASLRQLFAGTTLTHKALVMHLVTDENWAVTLAAASKRPVDTYFM LGGGLCILMAWCAGSLFGNQVGALLGNPERLGLDFAFTAVFTALLCSFWRGGRDLLPWLTAAAVALVVEQAVPGSKWYIP AGGLSGALCAALMPAHAAGKDRKQT
Sequences:
>Translated_265_residues MPRQTFFCQYIHTEGYPLQPSSPPSPSSPLPAPFSQLQKGFAANLVVAASVAAYGSVFGLLAAQKGIGWGQLLFMNLTIF AGSAQFVMVDMWQPPLPVAEIALAVLVINTRYLLIGASLRQLFAGTTLTHKALVMHLVTDENWAVTLAAASKRPVDTYFM LGGGLCILMAWCAGSLFGNQVGALLGNPERLGLDFAFTAVFTALLCSFWRGGRDLLPWLTAAAVALVVEQAVPGSKWYIP AGGLSGALCAALMPAHAAGKDRKQT >Mature_264_residues PRQTFFCQYIHTEGYPLQPSSPPSPSSPLPAPFSQLQKGFAANLVVAASVAAYGSVFGLLAAQKGIGWGQLLFMNLTIFA GSAQFVMVDMWQPPLPVAEIALAVLVINTRYLLIGASLRQLFAGTTLTHKALVMHLVTDENWAVTLAAASKRPVDTYFML GGGLCILMAWCAGSLFGNQVGALLGNPERLGLDFAFTAVFTALLCSFWRGGRDLLPWLTAAAVALVVEQAVPGSKWYIPA GGLSGALCAALMPAHAAGKDRKQT
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28099; Mature: 27968
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRQTFFCQYIHTEGYPLQPSSPPSPSSPLPAPFSQLQKGFAANLVVAASVAAYGSVFGL CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAQKGIGWGQLLFMNLTIFAGSAQFVMVDMWQPPLPVAEIALAVLVINTRYLLIGASLR HHHHCCCCHHHEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCHHEEEHHHHH QLFAGTTLTHKALVMHLVTDENWAVTLAAASKRPVDTYFMLGGGLCILMAWCAGSLFGNQ HHHCCCCHHHHHHEEEEEECCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH VGALLGNPERLGLDFAFTAVFTALLCSFWRGGRDLLPWLTAAAVALVVEQAVPGSKWYIP HHHHHCCHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE AGGLSGALCAALMPAHAAGKDRKQT CCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PRQTFFCQYIHTEGYPLQPSSPPSPSSPLPAPFSQLQKGFAANLVVAASVAAYGSVFGL CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAQKGIGWGQLLFMNLTIFAGSAQFVMVDMWQPPLPVAEIALAVLVINTRYLLIGASLR HHHHCCCCHHHEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCHHEEEHHHHH QLFAGTTLTHKALVMHLVTDENWAVTLAAASKRPVDTYFMLGGGLCILMAWCAGSLFGNQ HHHCCCCHHHHHHEEEEEECCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH VGALLGNPERLGLDFAFTAVFTALLCSFWRGGRDLLPWLTAAAVALVVEQAVPGSKWYIP HHHHHCCHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE AGGLSGALCAALMPAHAAGKDRKQT CCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA