Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is yegQ [C]

Identifier: 78358135

GI number: 78358135

Start: 3083368

End: 3084717

Strand: Direct

Name: yegQ [C]

Synonym: Dde_3095

Alternate gene names: 78358135

Gene position: 3083368-3084717 (Clockwise)

Preceding gene: 78358134

Following gene: 78358136

Centisome position: 82.66

GC content: 64.44

Gene sequence:

>1350_bases
ATGCCCCTGACAACATTTTCTCCGGAACTGCTGGCCCCTGCCGGTGACATGTCCAGACTGGACGCCGTACTGCGCTACGG
TGCCGACGCCGTCTATCTGGGCGGCACGGAAATGAATCTGCGCGCCGGTGCCGCGGGGTTCACCCCCGAAGCTCTGGGCA
CTGCACTGGCCAAAGCCCGCCGCTGCGGCGCCAGAGTATACTGCTGTGTCAACGCCCTGCCCTACGAGCATCAGCTGGAA
ACGGTGCGCGCCACACTGGAAAGACTGGCGCAGCCTTTCAGCTGCAACCAGCAGACTCTGGAACCGCACTGGCGCGACGA
CACGCTGCCCGACACCACGGAAAACAGCATTGACGGGCTGATCATAGCCGACCCCGGCGTGCTGCGCATGGCGCGCCGCA
TAGCGCCGCACATCCCCGTGCACATGAGCACACAGGCCAATACGGCCAACAGCGAATCCGCAGCATTCTGGCGCGATATG
GGGGCAAGCAGGCTAAATCTGGCACGCGAGCTGGGCGCGGCGGACATACGTGCCATCATGCGGGCCGTACCCGACGTGGA
ATATGAAACATTTGTCCACGGGGCCATGTGTCTTGCCGTTTCCGGCCGCTGCCTGCTGAGCGCATGGATGAACGACCGCC
CCGCCAATCTGGGGCAGTGCACCCACCCGTGCCGGTTCGACTACCGCACGGCGGGGCTTGCCGCCAGTGATGCGGAACCG
GACCATGCAGGCATCGAACTGGACGTCGAAGAACGCACCCGCGCCGGCGCACCGGCATGGACGGTGACGCAGGACAGTGG
CTGGTCACACATCTGGAGTCCGCATGACCTGTGTCTGGTGCGGTATCTGCGCTGGTTTGCCGTGCAGGGCGTGGCTGCAC
TGAAAATTGAAGGCCGCATGAAAACCGCAGGCTATGCCGCGCAGGTTGTTGATGTTTACCGTACTGCCGTAGATGACCTC
GCCGCCGGGCGTTTTCGCCCTGCGCTGTACATGCGTGAGCTGTGCAACACGGCCACCCGTCCGCTTTCGTCAGGTTTTTT
CCTGCCCCGCGGACGCAGGCGCACCTGGCAGGCGGCCTCTTCCGGCCATCGTCTGCCGCTGGTGGCCAGAACAGGCCGCC
GTCTTTCCGCAGGCAGCTGGGAAATGGCTGTACTGGCACCGTGGCAGTGCGACAGACCGGTCGAGATTCTCGTTCCGGGA
CTGAAAAGGCCCCTGCTGCAACCGCAGCACTGCCGCGTGGAAAACCACAGAGGCGAAACCGCGCGGCAGGTGCACCCCGG
CACTTCCGCGATACTGCACTGCGACCACCCCGACCTTGCTCCGGGGCTGTTTCTGCGGGCCTGCACATAG

Upstream 100 bases:

>100_bases
CGCTGGGCACGGGCAAGGGTGGCTTGCGCGTGCCGTATCTTATACTCGAAAAACTGAAGGCGGCCCGCACAGCAAACGGA
CTGCCTGTCTGACGGATACC

Downstream 100 bases:

>100_bases
CACGCAGCACCGCCTGCGCGCGGACAAGCACACAGGGTTCATAACGGCATGAATACACAGCAGCGCCGCCTGAAACGCGG
CACATTCCGCGAACAGCCGC

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MPLTTFSPELLAPAGDMSRLDAVLRYGADAVYLGGTEMNLRAGAAGFTPEALGTALAKARRCGARVYCCVNALPYEHQLE
TVRATLERLAQPFSCNQQTLEPHWRDDTLPDTTENSIDGLIIADPGVLRMARRIAPHIPVHMSTQANTANSESAAFWRDM
GASRLNLARELGAADIRAIMRAVPDVEYETFVHGAMCLAVSGRCLLSAWMNDRPANLGQCTHPCRFDYRTAGLAASDAEP
DHAGIELDVEERTRAGAPAWTVTQDSGWSHIWSPHDLCLVRYLRWFAVQGVAALKIEGRMKTAGYAAQVVDVYRTAVDDL
AAGRFRPALYMRELCNTATRPLSSGFFLPRGRRRTWQAASSGHRLPLVARTGRRLSAGSWEMAVLAPWQCDRPVEILVPG
LKRPLLQPQHCRVENHRGETARQVHPGTSAILHCDHPDLAPGLFLRACT

Sequences:

>Translated_449_residues
MPLTTFSPELLAPAGDMSRLDAVLRYGADAVYLGGTEMNLRAGAAGFTPEALGTALAKARRCGARVYCCVNALPYEHQLE
TVRATLERLAQPFSCNQQTLEPHWRDDTLPDTTENSIDGLIIADPGVLRMARRIAPHIPVHMSTQANTANSESAAFWRDM
GASRLNLARELGAADIRAIMRAVPDVEYETFVHGAMCLAVSGRCLLSAWMNDRPANLGQCTHPCRFDYRTAGLAASDAEP
DHAGIELDVEERTRAGAPAWTVTQDSGWSHIWSPHDLCLVRYLRWFAVQGVAALKIEGRMKTAGYAAQVVDVYRTAVDDL
AAGRFRPALYMRELCNTATRPLSSGFFLPRGRRRTWQAASSGHRLPLVARTGRRLSAGSWEMAVLAPWQCDRPVEILVPG
LKRPLLQPQHCRVENHRGETARQVHPGTSAILHCDHPDLAPGLFLRACT
>Mature_448_residues
PLTTFSPELLAPAGDMSRLDAVLRYGADAVYLGGTEMNLRAGAAGFTPEALGTALAKARRCGARVYCCVNALPYEHQLET
VRATLERLAQPFSCNQQTLEPHWRDDTLPDTTENSIDGLIIADPGVLRMARRIAPHIPVHMSTQANTANSESAAFWRDMG
ASRLNLARELGAADIRAIMRAVPDVEYETFVHGAMCLAVSGRCLLSAWMNDRPANLGQCTHPCRFDYRTAGLAASDAEPD
HAGIELDVEERTRAGAPAWTVTQDSGWSHIWSPHDLCLVRYLRWFAVQGVAALKIEGRMKTAGYAAQVVDVYRTAVDDLA
AGRFRPALYMRELCNTATRPLSSGFFLPRGRRRTWQAASSGHRLPLVARTGRRLSAGSWEMAVLAPWQCDRPVEILVPGL
KRPLLQPQHCRVENHRGETARQVHPGTSAILHCDHPDLAPGLFLRACT

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=380, Percent_Identity=33.9473684210526, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI87081910, Length=324, Percent_Identity=29.0123456790123, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1789548, Length=318, Percent_Identity=26.7295597484277, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 49362; Mature: 49231

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTTFSPELLAPAGDMSRLDAVLRYGADAVYLGGTEMNLRAGAAGFTPEALGTALAKAR
CCCCCCCHHHHCCCCCHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHH
RCGARVYCCVNALPYEHQLETVRATLERLAQPFSCNQQTLEPHWRDDTLPDTTENSIDGL
HCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEE
IIADPGVLRMARRIAPHIPVHMSTQANTANSESAAFWRDMGASRLNLARELGAADIRAIM
EEECCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHCHHHHHHHH
RAVPDVEYETFVHGAMCLAVSGRCLLSAWMNDRPANLGQCTHPCRFDYRTAGLAASDAEP
HHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
DHAGIELDVEERTRAGAPAWTVTQDSGWSHIWSPHDLCLVRYLRWFAVQGVAALKIEGRM
CCCCEEEEHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCC
KTAGYAAQVVDVYRTAVDDLAAGRFRPALYMRELCNTATRPLSSGFFLPRGRRRTWQAAS
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
SGHRLPLVARTGRRLSAGSWEMAVLAPWQCDRPVEILVPGLKRPLLQPQHCRVENHRGET
CCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCC
ARQVHPGTSAILHCDHPDLAPGLFLRACT
HHHCCCCCCEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure 
PLTTFSPELLAPAGDMSRLDAVLRYGADAVYLGGTEMNLRAGAAGFTPEALGTALAKAR
CCCCCCHHHHCCCCCHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHH
RCGARVYCCVNALPYEHQLETVRATLERLAQPFSCNQQTLEPHWRDDTLPDTTENSIDGL
HCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEE
IIADPGVLRMARRIAPHIPVHMSTQANTANSESAAFWRDMGASRLNLARELGAADIRAIM
EEECCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHCHHHHHHHH
RAVPDVEYETFVHGAMCLAVSGRCLLSAWMNDRPANLGQCTHPCRFDYRTAGLAASDAEP
HHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
DHAGIELDVEERTRAGAPAWTVTQDSGWSHIWSPHDLCLVRYLRWFAVQGVAALKIEGRM
CCCCEEEEHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCC
KTAGYAAQVVDVYRTAVDDLAAGRFRPALYMRELCNTATRPLSSGFFLPRGRRRTWQAAS
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
SGHRLPLVARTGRRLSAGSWEMAVLAPWQCDRPVEILVPGLKRPLLQPQHCRVENHRGET
CCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCC
ARQVHPGTSAILHCDHPDLAPGLFLRACT
HHHCCCCCCEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]