Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is srpH [H]

Identifier: 78358121

GI number: 78358121

Start: 3071155

End: 3072120

Strand: Direct

Name: srpH [H]

Synonym: Dde_3081

Alternate gene names: 78358121

Gene position: 3071155-3072120 (Clockwise)

Preceding gene: 78358120

Following gene: 78358122

Centisome position: 82.33

GC content: 57.66

Gene sequence:

>966_bases
ATGAGGAACTGCAGTAAAGAACCGGACAACATATGCGCAGACGGCATGGACTGGCTTGACGATGTGGTGGAGACCATGTG
CAGCCCGGAATCGTGCAGCAAAGTGTTCAGCAAACCGCTGAACAACGCGCCCATGCCCTCGCTGGAAGAGCTGACGGAAA
TAGTGGACAGGCTGAAGGCAGCCCTGTTTCCGGGATATTTCGGCAAATCATCCATCGAGATGGAGTCCATGCGCTACCAT
CTGGCGGCCAATCTTGATTCCATCTACCGCAAACTGGCAGACCAGATACGACGGGGCGGCTGCTTCACCTGCGCCGAATT
CGCCAACGACTGCCACAGCTGCGATGTCTATTCCCACGACCTTGCAAAACGGTTCATCGAACAGTTGCCTCAGATACGCG
GGCTGCTGCTGGGTGATGTCACCGCAGCATTCGAGGGCGACCCCGCCGCAAAAACCCCCGGCGAGACCGTTTTCTGCTAT
CCGTCCATAACCGCCATGCTGCATCACCGCATCGCCCATGCCCTGTATGACCTTGATGTGCCGCTCATTCCGCGCATCAT
AAGCGAAATGTCACACTCCAGAACGGGCATAGACATTCACCCCGGCGCCCGCATCGGCGAAGACTTCTTCATCGACCACG
GCACGGGCGTTGTCATAGGGGAAACATGCATCATCGGCAAAGGCTGCCGCCTGTATCAGGGGGTCACGCTGGGGGCGCTT
TCTTTCCCCAAAGACGCCAGCGGAACACTCATCAAAGGTAATCCGCGCCATCCCATTCTGGAAGACAATGTCACCGTGTA
TGCCGGTGCCACCATTCTCGGGCGCGTGACCATCGGCAAAGGGTCCATCATCGGCGGTAACGTGTGGCTGACACACGATG
TGCCCGAAGGATCAAAAATCGTCCAGCAGCGCAGCACGCGCCCGCAGGCGGACGAAAAAATGCTGGGTACCAAAAACGGA
CGCTGA

Upstream 100 bases:

>100_bases
TGTCTGCGACACCGGCGAACGCTACCTGAGCACACCGCTTTTTTCCGGCCAGAGCTAGCACGCTTTTTTGCCAACCCTCC
AGCAGAGCAACGGAACACAT

Downstream 100 bases:

>100_bases
TTGCGTCACAAGCTGATTCCGGCGGGATGTCCATGGGCATCCCGCTTTTTTTCATGCCCGCCCCTGCCTGACCATACCAT
GTGCCGGGCATTGCCCGCGC

Product: Serine O-acetyltransferase

Products: NA

Alternate protein names: SAT [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKAALFPGYFGKSSIEMESMRYH
LAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHDLAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCY
PSITAMLHHRIAHALYDLDVPLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL
SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKIVQQRSTRPQADEKMLGTKNG
R

Sequences:

>Translated_321_residues
MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKAALFPGYFGKSSIEMESMRYH
LAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHDLAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCY
PSITAMLHHRIAHALYDLDVPLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL
SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKIVQQRSTRPQADEKMLGTKNG
R
>Mature_321_residues
MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKAALFPGYFGKSSIEMESMRYH
LAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHDLAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCY
PSITAMLHHRIAHALYDLDVPLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL
SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKIVQQRSTRPQADEKMLGTKNG
R

Specific function: Cysteine biosynthesis. [C]

COG id: COG1045

COG function: function code E; Serine acetyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1790035, Length=157, Percent_Identity=31.8471337579618, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =2.3.1.30 [H]

Molecular weight: Translated: 35080; Mature: 35080

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKA
CCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ALFPGYFGKSSIEMESMRYHLAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHD
HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCHHHH
LAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCYPSITAMLHHRIAHALYDLDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCC
PLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL
CHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCEEEECEEEECCCCHHHCCCEECCC
SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKI
CCCCCCCCCEEECCCCCCCCCCCEEEEECCEEEEEEEECCCCEEECCEEEEECCCCHHHH
VQQRSTRPQADEKMLGTKNGR
HHHHCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKA
CCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ALFPGYFGKSSIEMESMRYHLAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHD
HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCHHHH
LAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCYPSITAMLHHRIAHALYDLDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCC
PLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL
CHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCEEEECEEEECCCCHHHCCCEECCC
SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKI
CCCCCCCCCEEECCCCCCCCCCCEEEEECCEEEEEEEECCCCEEECCEEEEECCCCHHHH
VQQRSTRPQADEKMLGTKNGR
HHHHCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7603442 [H]