| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is srpH [H]
Identifier: 78358121
GI number: 78358121
Start: 3071155
End: 3072120
Strand: Direct
Name: srpH [H]
Synonym: Dde_3081
Alternate gene names: 78358121
Gene position: 3071155-3072120 (Clockwise)
Preceding gene: 78358120
Following gene: 78358122
Centisome position: 82.33
GC content: 57.66
Gene sequence:
>966_bases ATGAGGAACTGCAGTAAAGAACCGGACAACATATGCGCAGACGGCATGGACTGGCTTGACGATGTGGTGGAGACCATGTG CAGCCCGGAATCGTGCAGCAAAGTGTTCAGCAAACCGCTGAACAACGCGCCCATGCCCTCGCTGGAAGAGCTGACGGAAA TAGTGGACAGGCTGAAGGCAGCCCTGTTTCCGGGATATTTCGGCAAATCATCCATCGAGATGGAGTCCATGCGCTACCAT CTGGCGGCCAATCTTGATTCCATCTACCGCAAACTGGCAGACCAGATACGACGGGGCGGCTGCTTCACCTGCGCCGAATT CGCCAACGACTGCCACAGCTGCGATGTCTATTCCCACGACCTTGCAAAACGGTTCATCGAACAGTTGCCTCAGATACGCG GGCTGCTGCTGGGTGATGTCACCGCAGCATTCGAGGGCGACCCCGCCGCAAAAACCCCCGGCGAGACCGTTTTCTGCTAT CCGTCCATAACCGCCATGCTGCATCACCGCATCGCCCATGCCCTGTATGACCTTGATGTGCCGCTCATTCCGCGCATCAT AAGCGAAATGTCACACTCCAGAACGGGCATAGACATTCACCCCGGCGCCCGCATCGGCGAAGACTTCTTCATCGACCACG GCACGGGCGTTGTCATAGGGGAAACATGCATCATCGGCAAAGGCTGCCGCCTGTATCAGGGGGTCACGCTGGGGGCGCTT TCTTTCCCCAAAGACGCCAGCGGAACACTCATCAAAGGTAATCCGCGCCATCCCATTCTGGAAGACAATGTCACCGTGTA TGCCGGTGCCACCATTCTCGGGCGCGTGACCATCGGCAAAGGGTCCATCATCGGCGGTAACGTGTGGCTGACACACGATG TGCCCGAAGGATCAAAAATCGTCCAGCAGCGCAGCACGCGCCCGCAGGCGGACGAAAAAATGCTGGGTACCAAAAACGGA CGCTGA
Upstream 100 bases:
>100_bases TGTCTGCGACACCGGCGAACGCTACCTGAGCACACCGCTTTTTTCCGGCCAGAGCTAGCACGCTTTTTTGCCAACCCTCC AGCAGAGCAACGGAACACAT
Downstream 100 bases:
>100_bases TTGCGTCACAAGCTGATTCCGGCGGGATGTCCATGGGCATCCCGCTTTTTTTCATGCCCGCCCCTGCCTGACCATACCAT GTGCCGGGCATTGCCCGCGC
Product: Serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKAALFPGYFGKSSIEMESMRYH LAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHDLAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCY PSITAMLHHRIAHALYDLDVPLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKIVQQRSTRPQADEKMLGTKNG R
Sequences:
>Translated_321_residues MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKAALFPGYFGKSSIEMESMRYH LAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHDLAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCY PSITAMLHHRIAHALYDLDVPLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKIVQQRSTRPQADEKMLGTKNG R >Mature_321_residues MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKAALFPGYFGKSSIEMESMRYH LAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHDLAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCY PSITAMLHHRIAHALYDLDVPLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKIVQQRSTRPQADEKMLGTKNG R
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=157, Percent_Identity=31.8471337579618, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 35080; Mature: 35080
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKA CCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ALFPGYFGKSSIEMESMRYHLAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHD HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCHHHH LAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCYPSITAMLHHRIAHALYDLDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCC PLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL CHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCEEEECEEEECCCCHHHCCCEECCC SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKI CCCCCCCCCEEECCCCCCCCCCCEEEEECCEEEEEEEECCCCEEECCEEEEECCCCHHHH VQQRSTRPQADEKMLGTKNGR HHHHCCCCCHHHHHCCCCCCC >Mature Secondary Structure MRNCSKEPDNICADGMDWLDDVVETMCSPESCSKVFSKPLNNAPMPSLEELTEIVDRLKA CCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ALFPGYFGKSSIEMESMRYHLAANLDSIYRKLADQIRRGGCFTCAEFANDCHSCDVYSHD HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCHHHH LAKRFIEQLPQIRGLLLGDVTAAFEGDPAAKTPGETVFCYPSITAMLHHRIAHALYDLDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCC PLIPRIISEMSHSRTGIDIHPGARIGEDFFIDHGTGVVIGETCIIGKGCRLYQGVTLGAL CHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCEEEECEEEECCCCHHHCCCEECCC SFPKDASGTLIKGNPRHPILEDNVTVYAGATILGRVTIGKGSIIGGNVWLTHDVPEGSKI CCCCCCCCCEEECCCCCCCCCCCEEEEECCEEEEEEEECCCCEEECCEEEEECCCCHHHH VQQRSTRPQADEKMLGTKNGR HHHHCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7603442 [H]