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The map label for this gene is 78358001

Identifier: 78358001

GI number: 78358001

Start: 2943715

End: 2944611

Strand: Direct

Name: 78358001

Synonym: Dde_2961

Alternate gene names: NA

Gene position: 2943715-2944611 (Clockwise)

Preceding gene: 78358000

Following gene: 78358003

Centisome position: 78.92

GC content: 65.55

Gene sequence:

>897_bases
ATGAACACCACCGGCAGCACCGCATCCGGGCAGCGGGACGGACAGCAGGACGCACAGCACATACGCCGTCCGGTAGTGGC
AGGCCGCTTTTACCCCGATTCGCCCGCCGAACTGCAAAGCATGCTGCGGGCATATCTGGACGAAGCTGCCGCACCGCCGC
AGAAGCCTACTCTGCTCGCCATGGTGCCCCACGCGGGCTATGTATTTTCGGGTGCGGTGGCAGGTTGCACTCTGGCGCAG
GCCATGCTGCCGCAGACGCTGTTTGTGCTGGGCCCCAACCATACCGGCAGGGGATCCGGCATTGCCGTCTGGCCGGAAGG
CGTCTGGCGCACCCCGCTGGGTGATGTACCCGTGGACAATGCGCTGGCCGCCGAATTCTGCGCGCTCTGCGCGCCGGCCC
GGCCTGATACGCTGGCCCACAGTGCCGAGCACTCGCTGGAGGTCGTTCTGCCGTTTCTGCAGCTCCGCGTGCCCCGCGTA
CGTATTGTGCCTGTATCCATCGGCGATCCGTCACTGGCGGTGCTTACTGCCGCAGGCGCCGCAATGGCGCAGATCATACG
CCGTGCGGCTCAGACGGCAGACCCCGGCGGGCAGAACCGCATAGCCATGGTGGTCAGTTCGGACATGACGCACTTTCTGC
CACAGGATGAAGCCCGCCGCCTTGACGCCATGGCGCTGGAACAGGTTACCGCTCTGAACCCGCAGGGGCTGTACACAACG
GTGCGCGAGAAGCGCATTTCCATGTGCGGCGTGCTGCCCATGACCGCGGCACTGGAAGCCTGCCGCCTGCTGGGCGCCAC
GGGCGCACGCCTGACACGCTATGCCACATCCGGAGATATAACAGGAAAGACTGACAGTGTGGTGGGCTATGCCGGAGCGC
TGGTGGATGTGCCCTAG

Upstream 100 bases:

>100_bases
TGGCCGCTTCGGAACTGCGAACCCATGAACTTTCACAGGACGCGGCCCAGTTTTCCCCCACGGGAAGGCTGTAACCCGCG
GGTGCAGAGGGAAAAAGCTC

Downstream 100 bases:

>100_bases
ACGCGACGCTGCCGCCGCATGGTGCAACGGCACAACGGTACAACGGGGCAACGGGGCAACGGGGCAACTATACAACGGGG
CTCACACCAGATGCAGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNTTGSTASGQRDGQQDAQHIRRPVVAGRFYPDSPAELQSMLRAYLDEAAAPPQKPTLLAMVPHAGYVFSGAVAGCTLAQ
AMLPQTLFVLGPNHTGRGSGIAVWPEGVWRTPLGDVPVDNALAAEFCALCAPARPDTLAHSAEHSLEVVLPFLQLRVPRV
RIVPVSIGDPSLAVLTAAGAAMAQIIRRAAQTADPGGQNRIAMVVSSDMTHFLPQDEARRLDAMALEQVTALNPQGLYTT
VREKRISMCGVLPMTAALEACRLLGATGARLTRYATSGDITGKTDSVVGYAGALVDVP

Sequences:

>Translated_298_residues
MNTTGSTASGQRDGQQDAQHIRRPVVAGRFYPDSPAELQSMLRAYLDEAAAPPQKPTLLAMVPHAGYVFSGAVAGCTLAQ
AMLPQTLFVLGPNHTGRGSGIAVWPEGVWRTPLGDVPVDNALAAEFCALCAPARPDTLAHSAEHSLEVVLPFLQLRVPRV
RIVPVSIGDPSLAVLTAAGAAMAQIIRRAAQTADPGGQNRIAMVVSSDMTHFLPQDEARRLDAMALEQVTALNPQGLYTT
VREKRISMCGVLPMTAALEACRLLGATGARLTRYATSGDITGKTDSVVGYAGALVDVP
>Mature_298_residues
MNTTGSTASGQRDGQQDAQHIRRPVVAGRFYPDSPAELQSMLRAYLDEAAAPPQKPTLLAMVPHAGYVFSGAVAGCTLAQ
AMLPQTLFVLGPNHTGRGSGIAVWPEGVWRTPLGDVPVDNALAAEFCALCAPARPDTLAHSAEHSLEVVLPFLQLRVPRV
RIVPVSIGDPSLAVLTAAGAAMAQIIRRAAQTADPGGQNRIAMVVSSDMTHFLPQDEARRLDAMALEQVTALNPQGLYTT
VREKRISMCGVLPMTAALEACRLLGATGARLTRYATSGDITGKTDSVVGYAGALVDVP

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=298, Percent_Identity=26.1744966442953, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI32566861, Length=262, Percent_Identity=28.2442748091603, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI25146594, Length=262, Percent_Identity=28.2442748091603, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI21357419, Length=300, Percent_Identity=27.3333333333333, Blast_Score=99, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 31356; Mature: 31356

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTGSTASGQRDGQQDAQHIRRPVVAGRFYPDSPAELQSMLRAYLDEAAAPPQKPTLLA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
MVPHAGYVFSGAVAGCTLAQAMLPQTLFVLGPNHTGRGSGIAVWPEGVWRTPLGDVPVDN
ECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCH
ALAAEFCALCAPARPDTLAHSAEHSLEVVLPFLQLRVPRVRIVPVSIGDPSLAVLTAAGA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHH
AMAQIIRRAAQTADPGGQNRIAMVVSSDMTHFLPQDEARRLDAMALEQVTALNPQGLYTT
HHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH
VREKRISMCGVLPMTAALEACRLLGATGARLTRYATSGDITGKTDSVVGYAGALVDVP
HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHCCEEEECC
>Mature Secondary Structure
MNTTGSTASGQRDGQQDAQHIRRPVVAGRFYPDSPAELQSMLRAYLDEAAAPPQKPTLLA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
MVPHAGYVFSGAVAGCTLAQAMLPQTLFVLGPNHTGRGSGIAVWPEGVWRTPLGDVPVDN
ECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCH
ALAAEFCALCAPARPDTLAHSAEHSLEVVLPFLQLRVPRVRIVPVSIGDPSLAVLTAAGA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHH
AMAQIIRRAAQTADPGGQNRIAMVVSSDMTHFLPQDEARRLDAMALEQVTALNPQGLYTT
HHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH
VREKRISMCGVLPMTAALEACRLLGATGARLTRYATSGDITGKTDSVVGYAGALVDVP
HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]