| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357967
Identifier: 78357967
GI number: 78357967
Start: 2904824
End: 2907568
Strand: Direct
Name: 78357967
Synonym: Dde_2927
Alternate gene names: NA
Gene position: 2904824-2907568 (Clockwise)
Preceding gene: 78357958
Following gene: 78357968
Centisome position: 77.87
GC content: 43.39
Gene sequence:
>2745_bases TTGTATTGTCTATACAATCCGTTGCAGAGATGTTTTTTTATCGTGTCGCTCATTCTCGATGGAGCTTTTATGCCCCCCAA AAATGGACGTTATCGTATTTACATTAATGCTCTCGGAAAAATGATGTACTGCCGTGACACATTAGATGAAATACGCAACA TTATGCGTTACAGCGCAGTGCTTATCAGCATACACAGCCTGATATTTCAGCAAGACAAGCTTATACGTATATGTGGCGAT ATCCATCTCAGGTGGAGCCTGTATAGCGGCTTTGAGTATTACACGGATTTCAAGGGGGAATTCAGACATACCACCTTAAA GCCTTTTGAAAAAACACGCCTAGCACTTTTTTTTCGACAAATGGCGATACCTGTTGAATACCCCAGATACTACTGCGACG ATAACCACCTTGTGCATGTTTTTATCCCTGAAAAAGCATTCAGTACTCCGTGCAATACGACCACACGATTAGAAGTTGAT TTTAGCATTTTCAGATTTCTCAGGTGTTATCAGCTAGACATAACATATTACGACCATGAAGGAGAACGTCTGCCATTTTA TCCTTGTCAACAAGCTCTTATGTCTACGCCTGAGCTGCCTTCTAAGTTTTTTTGGCAAACAACTGATATCTTCAATGAAG AGCCGCCTGAGAATGTTTCTGCAATACCCATGAATTACGACAGGTCCTTGCTTTGCGAGCACTATTGGCCTGATAACAAA AAAAGACTTGATTTATTGAATTTATGCCCTGTCCTATATAATGGGGGTCGCCAGATTGCAGAACTATCAAGTGCTGAAAT TGAGCTGCTATTATCAATACTCTGTAAAAAGAAATATATCCAGTGGCTAGTACGTAATTTTAGTACAAGCAATGCTCCTG AGGGTGTTCTTTACGACCTTTTTGAAAAGGCTATCGGCCAAAAAAAAACATGGAATCCGCCCTTCTGCATTGAAATTAAC AAATGGCTACGCTCAAGAAACTCTCGTTTGCAATGTTCTGGCAACTGTGGCGTCACAACGCCGTTAGCACTAATGTTTAA GGAGCCGTTTTTTCGCGAAGAGTTTAGGAAAAAGTACAGCCCAACCAATGATACATTGTTTCAAGTCGCATCAGACGGCG TGTATAAAACAACCTCCTCAGGCAAAAAGCGAGAGCTCATCCTATCCCGCCCCCTATGGATTTCTTACGGAATTAAAGGG GGGCTTGGGCAGGGCAACGGATTTCAGCTGGCATTCTATAATGCAATGGGATCATACTGTGAGGTAACTATAGCCAATGA TAGTTTCTTAGGCCCAACCCTGTTTAAGGTATTAGAGCAGCACGGATTAGAAATTCCCAAAAGTCCCAAATGTCGTTCTA TGCTGCGGGAATATATGAAAACCATCCGTGTAAAATTGCTGTGCGATGCTACTATGGTAAGCTCATGCGGATGGCAGCAA GTGCCGTCCGGCATTACTGTATTTGTTCTTCCTTCTACGTCGTATAGCAGCCGCTCTCCTGACTTCCGGTATATAGCCCC GACAAAATGCCTGCCAGAATTCGGTACTCATGCCCCCAACACAGCGAAAACGACATACTCGTCTCGAGTGCGAATAACCG CTAGCAGCATGTTAGCGAAGACTGCATCTTTCGCTGCTCCGCTGCTTCGCATTCTTAAACTGCGTGGGTTCTGCCTGTAT TTTTATTCAGATAACGCCAATGAAAGGCAAAATATATTAAAGGCGGCTGCAGCAGTCTGGGAAAAAAGTTACGGTTCAGT AACCTACACACTCCCCATCAGTGCTAAGAATATCCCTGAGTTAAAACGCATCCACAGAGACTCTGCCATCTGCCTTGATT TGCCCGATTCCGAACATGAAGGTAACTTTCTAGCTTTTGTCCGACGCTTTTTACACGGTCGAAAAGGAAAAGATGGAAAA GAGTGTGGGGTCATAATTGCTGTAGGTAAAAGGCCATTGAAGTCTGCTAGTGATACTGTGGGACGATGCCAAATAGTATC ATCACAAAGCGGAAAACGCGGTCCCCGTGACGTACTTGTTTTGTCAATGCCGTATAACGACAATGACCCGGACCTTACAC TCTCTCAAGTGCAAACCCATGGAGAAAGTCTACTCAGAGCTTTGGTTTCTTTTTCTAAGGATGACGAAAACACACTCAGA AACAGGTTCAAAAAAATCCAAGACGAATGCAGGCCTAAAGGATGCAGTAACAACGTAAAGAAAGCTGTAGCAATTTTTTC GCTTTCTCTCCATTCGCTGCAACGATACCCTCAGCTATTTGTCAGTAAAATTTTAGGCAATAATACGGGCATGGCCGACA AGGTTATGAACCTGCTTTTAAGCGACATGCTTGACCCGCACGAGCATTTCAAAAAGTACCTACACAACCTTCATGCGCGG CAGAGCACAGCGTATTTGCTGCCCTCAAAAAAGCATCTCTTTCTATATCCAACCAAGCTTTTCCATAACTGCTGCGATAC AGCGCACCAGAAGGCCTTTGTCCATTTTCTTCTCACTTGGAACATTTTAGTGTGCAAAAAAAGGGGGCAGACGTCATCTG TCGTCCACATTTCGGAAAAAGCAAAAAGTGTTCGAGGATACTTAATTTCCATTCAAAAGCTAGAGGAGCAGCTTTTGAAA ATCGACCCTCAAAGCTATAGACAGCAATACATTGATCGTCTTCAAAGAGCCAAAGTTGCAAGAGTGAAGCAGAAGGAGGA TAACACAGCCGATAAGAGAAAGTAG
Upstream 100 bases:
>100_bases AGCATTGCCTGTTAGACGGTCAATCTCTACACCGGCAAAAATTGGTGGAAGGTACTCTTGTAGTTGCTGCTTTAATTCGT TCATAGTCATCTCCGCTTAG
Downstream 100 bases:
>100_bases AGGAAGGCAACACAGGCATATGCGCAAATATCCAAAAAATCTCCTGACAATCATTTGTGTTATATTTTTTATATTTTTTT TGTAAGCGTAATTTCCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 914; Mature: 914
Protein sequence:
>914_residues MYCLYNPLQRCFFIVSLILDGAFMPPKNGRYRIYINALGKMMYCRDTLDEIRNIMRYSAVLISIHSLIFQQDKLIRICGD IHLRWSLYSGFEYYTDFKGEFRHTTLKPFEKTRLALFFRQMAIPVEYPRYYCDDNHLVHVFIPEKAFSTPCNTTTRLEVD FSIFRFLRCYQLDITYYDHEGERLPFYPCQQALMSTPELPSKFFWQTTDIFNEEPPENVSAIPMNYDRSLLCEHYWPDNK KRLDLLNLCPVLYNGGRQIAELSSAEIELLLSILCKKKYIQWLVRNFSTSNAPEGVLYDLFEKAIGQKKTWNPPFCIEIN KWLRSRNSRLQCSGNCGVTTPLALMFKEPFFREEFRKKYSPTNDTLFQVASDGVYKTTSSGKKRELILSRPLWISYGIKG GLGQGNGFQLAFYNAMGSYCEVTIANDSFLGPTLFKVLEQHGLEIPKSPKCRSMLREYMKTIRVKLLCDATMVSSCGWQQ VPSGITVFVLPSTSYSSRSPDFRYIAPTKCLPEFGTHAPNTAKTTYSSRVRITASSMLAKTASFAAPLLRILKLRGFCLY FYSDNANERQNILKAAAAVWEKSYGSVTYTLPISAKNIPELKRIHRDSAICLDLPDSEHEGNFLAFVRRFLHGRKGKDGK ECGVIIAVGKRPLKSASDTVGRCQIVSSQSGKRGPRDVLVLSMPYNDNDPDLTLSQVQTHGESLLRALVSFSKDDENTLR NRFKKIQDECRPKGCSNNVKKAVAIFSLSLHSLQRYPQLFVSKILGNNTGMADKVMNLLLSDMLDPHEHFKKYLHNLHAR QSTAYLLPSKKHLFLYPTKLFHNCCDTAHQKAFVHFLLTWNILVCKKRGQTSSVVHISEKAKSVRGYLISIQKLEEQLLK IDPQSYRQQYIDRLQRAKVARVKQKEDNTADKRK
Sequences:
>Translated_914_residues MYCLYNPLQRCFFIVSLILDGAFMPPKNGRYRIYINALGKMMYCRDTLDEIRNIMRYSAVLISIHSLIFQQDKLIRICGD IHLRWSLYSGFEYYTDFKGEFRHTTLKPFEKTRLALFFRQMAIPVEYPRYYCDDNHLVHVFIPEKAFSTPCNTTTRLEVD FSIFRFLRCYQLDITYYDHEGERLPFYPCQQALMSTPELPSKFFWQTTDIFNEEPPENVSAIPMNYDRSLLCEHYWPDNK KRLDLLNLCPVLYNGGRQIAELSSAEIELLLSILCKKKYIQWLVRNFSTSNAPEGVLYDLFEKAIGQKKTWNPPFCIEIN KWLRSRNSRLQCSGNCGVTTPLALMFKEPFFREEFRKKYSPTNDTLFQVASDGVYKTTSSGKKRELILSRPLWISYGIKG GLGQGNGFQLAFYNAMGSYCEVTIANDSFLGPTLFKVLEQHGLEIPKSPKCRSMLREYMKTIRVKLLCDATMVSSCGWQQ VPSGITVFVLPSTSYSSRSPDFRYIAPTKCLPEFGTHAPNTAKTTYSSRVRITASSMLAKTASFAAPLLRILKLRGFCLY FYSDNANERQNILKAAAAVWEKSYGSVTYTLPISAKNIPELKRIHRDSAICLDLPDSEHEGNFLAFVRRFLHGRKGKDGK ECGVIIAVGKRPLKSASDTVGRCQIVSSQSGKRGPRDVLVLSMPYNDNDPDLTLSQVQTHGESLLRALVSFSKDDENTLR NRFKKIQDECRPKGCSNNVKKAVAIFSLSLHSLQRYPQLFVSKILGNNTGMADKVMNLLLSDMLDPHEHFKKYLHNLHAR QSTAYLLPSKKHLFLYPTKLFHNCCDTAHQKAFVHFLLTWNILVCKKRGQTSSVVHISEKAKSVRGYLISIQKLEEQLLK IDPQSYRQQYIDRLQRAKVARVKQKEDNTADKRK >Mature_914_residues MYCLYNPLQRCFFIVSLILDGAFMPPKNGRYRIYINALGKMMYCRDTLDEIRNIMRYSAVLISIHSLIFQQDKLIRICGD IHLRWSLYSGFEYYTDFKGEFRHTTLKPFEKTRLALFFRQMAIPVEYPRYYCDDNHLVHVFIPEKAFSTPCNTTTRLEVD FSIFRFLRCYQLDITYYDHEGERLPFYPCQQALMSTPELPSKFFWQTTDIFNEEPPENVSAIPMNYDRSLLCEHYWPDNK KRLDLLNLCPVLYNGGRQIAELSSAEIELLLSILCKKKYIQWLVRNFSTSNAPEGVLYDLFEKAIGQKKTWNPPFCIEIN KWLRSRNSRLQCSGNCGVTTPLALMFKEPFFREEFRKKYSPTNDTLFQVASDGVYKTTSSGKKRELILSRPLWISYGIKG GLGQGNGFQLAFYNAMGSYCEVTIANDSFLGPTLFKVLEQHGLEIPKSPKCRSMLREYMKTIRVKLLCDATMVSSCGWQQ VPSGITVFVLPSTSYSSRSPDFRYIAPTKCLPEFGTHAPNTAKTTYSSRVRITASSMLAKTASFAAPLLRILKLRGFCLY FYSDNANERQNILKAAAAVWEKSYGSVTYTLPISAKNIPELKRIHRDSAICLDLPDSEHEGNFLAFVRRFLHGRKGKDGK ECGVIIAVGKRPLKSASDTVGRCQIVSSQSGKRGPRDVLVLSMPYNDNDPDLTLSQVQTHGESLLRALVSFSKDDENTLR NRFKKIQDECRPKGCSNNVKKAVAIFSLSLHSLQRYPQLFVSKILGNNTGMADKVMNLLLSDMLDPHEHFKKYLHNLHAR QSTAYLLPSKKHLFLYPTKLFHNCCDTAHQKAFVHFLLTWNILVCKKRGQTSSVVHISEKAKSVRGYLISIQKLEEQLLK IDPQSYRQQYIDRLQRAKVARVKQKEDNTADKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105129; Mature: 105129
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCLYNPLQRCFFIVSLILDGAFMPPKNGRYRIYINALGKMMYCRDTLDEIRNIMRYSAV CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH LISIHSLIFQQDKLIRICGDIHLRWSLYSGFEYYTDFKGEFRHTTLKPFEKTRLALFFRQ HHHHHHHHHCCCCHHEEECCEEEEEEEECCCHHEECCCCCCCCCCCCHHHHHHHHHHHHH MAIPVEYPRYYCDDNHLVHVFIPEKAFSTPCNTTTRLEVDFSIFRFLRCYQLDITYYDHE HCCCCCCCCEEECCCCEEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHHEEEEEEEECC GERLPFYPCQQALMSTPELPSKFFWQTTDIFNEEPPENVSAIPMNYDRSLLCEHYWPDNK CCCCCCHHHHHHHCCCCCCCHHHHCCHHHHCCCCCCCCCEECCCCCCCHHHHHCCCCCCC KRLDLLNLCPVLYNGGRQIAELSSAEIELLLSILCKKKYIQWLVRNFSTSNAPEGVLYDL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH FEKAIGQKKTWNPPFCIEINKWLRSRNSRLQCSGNCGVTTPLALMFKEPFFREEFRKKYS HHHHHCCCCCCCCCEEEEHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCC PTNDTLFQVASDGVYKTTSSGKKRELILSRPLWISYGIKGGLGQGNGFQLAFYNAMGSYC CCCCHHHHHHCCCCEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCEE EVTIANDSFLGPTLFKVLEQHGLEIPKSPKCRSMLREYMKTIRVKLLCDATMVSSCGWQQ EEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECHHHHHCCCHHH VPSGITVFVLPSTSYSSRSPDFRYIAPTKCLPEFGTHAPNTAKTTYSSRVRITASSMLAK CCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHH TASFAAPLLRILKLRGFCLYFYSDNANERQNILKAAAAVWEKSYGSVTYTLPISAKNIPE HHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH LKRIHRDSAICLDLPDSEHEGNFLAFVRRFLHGRKGKDGKECGVIIAVGKRPLKSASDTV HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCC GRCQIVSSQSGKRGPRDVLVLSMPYNDNDPDLTLSQVQTHGESLLRALVSFSKDDENTLR CEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH NRFKKIQDECRPKGCSNNVKKAVAIFSLSLHSLQRYPQLFVSKILGNNTGMADKVMNLLL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SDMLDPHEHFKKYLHNLHARQSTAYLLPSKKHLFLYPTKLFHNCCDTAHQKAFVHFLLTW HHCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH NILVCKKRGQTSSVVHISEKAKSVRGYLISIQKLEEQLLKIDPQSYRQQYIDRLQRAKVA CEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RVKQKEDNTADKRK HHHHCCCCCCCCCC >Mature Secondary Structure MYCLYNPLQRCFFIVSLILDGAFMPPKNGRYRIYINALGKMMYCRDTLDEIRNIMRYSAV CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH LISIHSLIFQQDKLIRICGDIHLRWSLYSGFEYYTDFKGEFRHTTLKPFEKTRLALFFRQ HHHHHHHHHCCCCHHEEECCEEEEEEEECCCHHEECCCCCCCCCCCCHHHHHHHHHHHHH MAIPVEYPRYYCDDNHLVHVFIPEKAFSTPCNTTTRLEVDFSIFRFLRCYQLDITYYDHE HCCCCCCCCEEECCCCEEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHHEEEEEEEECC GERLPFYPCQQALMSTPELPSKFFWQTTDIFNEEPPENVSAIPMNYDRSLLCEHYWPDNK CCCCCCHHHHHHHCCCCCCCHHHHCCHHHHCCCCCCCCCEECCCCCCCHHHHHCCCCCCC KRLDLLNLCPVLYNGGRQIAELSSAEIELLLSILCKKKYIQWLVRNFSTSNAPEGVLYDL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH FEKAIGQKKTWNPPFCIEINKWLRSRNSRLQCSGNCGVTTPLALMFKEPFFREEFRKKYS HHHHHCCCCCCCCCEEEEHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCC PTNDTLFQVASDGVYKTTSSGKKRELILSRPLWISYGIKGGLGQGNGFQLAFYNAMGSYC CCCCHHHHHHCCCCEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCEE EVTIANDSFLGPTLFKVLEQHGLEIPKSPKCRSMLREYMKTIRVKLLCDATMVSSCGWQQ EEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECHHHHHCCCHHH VPSGITVFVLPSTSYSSRSPDFRYIAPTKCLPEFGTHAPNTAKTTYSSRVRITASSMLAK CCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHH TASFAAPLLRILKLRGFCLYFYSDNANERQNILKAAAAVWEKSYGSVTYTLPISAKNIPE HHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH LKRIHRDSAICLDLPDSEHEGNFLAFVRRFLHGRKGKDGKECGVIIAVGKRPLKSASDTV HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCC GRCQIVSSQSGKRGPRDVLVLSMPYNDNDPDLTLSQVQTHGESLLRALVSFSKDDENTLR CEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH NRFKKIQDECRPKGCSNNVKKAVAIFSLSLHSLQRYPQLFVSKILGNNTGMADKVMNLLL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SDMLDPHEHFKKYLHNLHARQSTAYLLPSKKHLFLYPTKLFHNCCDTAHQKAFVHFLLTW HHCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH NILVCKKRGQTSSVVHISEKAKSVRGYLISIQKLEEQLLKIDPQSYRQQYIDRLQRAKVA CEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RVKQKEDNTADKRK HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA