| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357964
Identifier: 78357964
GI number: 78357964
Start: 2903508
End: 2904329
Strand: Reverse
Name: 78357964
Synonym: Dde_2924
Alternate gene names: NA
Gene position: 2904329-2903508 (Counterclockwise)
Preceding gene: 78357965
Following gene: 78357963
Centisome position: 77.86
GC content: 53.16
Gene sequence:
>822_bases ATGGAAAATCACATACTAACTTGTTCCGAGAGCATCACGGAGCTTGCCAAGGCCATGTTGCAGGTGCAGCAGAGGCTTGT TCCTGTCATGAAGGATACGACGAATCCGTTTGTGGGGAGTCGGTATGCGAGTCTGAACTCTGTTATGGAGGCGTGCCGGG AGGCGCTGAATGCCAATGGTATTTGGGTTGTGCAATATCCTGTGCAAGTTGCGCCGCCGATTTATGAAGGAGCTGGATGC CCGCAAAACCTGTTGGGATTGGTGACCAAGCTGGTTCATGCGGAGTCGGGACAGTGGCAATCCTCACTTATGGTGATGCC GCTGCCAAAGGCTGATCCACAAGGGTATGGTTCGGCGTTGACCTATGCTCGCCGTTACGGCCTTACAACGCTAGTCGGGC TGGTGACGGAAGTAGATGATGATGCGGAAGGTGCCATGTCTCGAAATCAGCAGCCTCGTTCCAGGGCAAAGAGTGCGCCA CAGTCGGGAGTCTCGTGGGGTGAGACAAGGTCAGCGCAGGCTTCCCAAGCCGGAAACAATTCCAAGAAATCAGGAAGAGG TGCGAGCACAGGGGCGGCTAAGAAAGCGGTTGAGATAGGCTCTACCGACGCTCTGCAAAATTTATTATCTGCTCAGAACT CGTTACCGCGCATTGATGGTGTCAGCTATCAAACTATCCGGGCACAGGACGGACGTTTCTGTATTACTGCTTCTGGTGAT ACCAGGTCAAAAAGCACGCTTCTCAAAGAAGCAGGTTTCCGTTGGGATGCTACACGAAAGCTATGGTGGCGCTATGCCCA GCTTCAAGACAATGCAGCCTGA
Upstream 100 bases:
>100_bases ACGGCTATATTACCTCTTTGGATACGCTGTTCATTTGCCCTTATCCGGCGTTTAAACCGGATGAGGGCTTTTTTATGTCT GCTTCAAGGAGGTATTCCCA
Downstream 100 bases:
>100_bases CGATCCCAACACAGACATTTAGCACTCAGCACAGCCTCCACAAAGGGGGCTGTGCTGTTTTGTTGCAGGAGGATCGCATG ACGAAAGATAGCAAGGGCGT
Product: ERF family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MENHILTCSESITELAKAMLQVQQRLVPVMKDTTNPFVGSRYASLNSVMEACREALNANGIWVVQYPVQVAPPIYEGAGC PQNLLGLVTKLVHAESGQWQSSLMVMPLPKADPQGYGSALTYARRYGLTTLVGLVTEVDDDAEGAMSRNQQPRSRAKSAP QSGVSWGETRSAQASQAGNNSKKSGRGASTGAAKKAVEIGSTDALQNLLSAQNSLPRIDGVSYQTIRAQDGRFCITASGD TRSKSTLLKEAGFRWDATRKLWWRYAQLQDNAA
Sequences:
>Translated_273_residues MENHILTCSESITELAKAMLQVQQRLVPVMKDTTNPFVGSRYASLNSVMEACREALNANGIWVVQYPVQVAPPIYEGAGC PQNLLGLVTKLVHAESGQWQSSLMVMPLPKADPQGYGSALTYARRYGLTTLVGLVTEVDDDAEGAMSRNQQPRSRAKSAP QSGVSWGETRSAQASQAGNNSKKSGRGASTGAAKKAVEIGSTDALQNLLSAQNSLPRIDGVSYQTIRAQDGRFCITASGD TRSKSTLLKEAGFRWDATRKLWWRYAQLQDNAA >Mature_273_residues MENHILTCSESITELAKAMLQVQQRLVPVMKDTTNPFVGSRYASLNSVMEACREALNANGIWVVQYPVQVAPPIYEGAGC PQNLLGLVTKLVHAESGQWQSSLMVMPLPKADPQGYGSALTYARRYGLTTLVGLVTEVDDDAEGAMSRNQQPRSRAKSAP QSGVSWGETRSAQASQAGNNSKKSGRGASTGAAKKAVEIGSTDALQNLLSAQNSLPRIDGVSYQTIRAQDGRFCITASGD TRSKSTLLKEAGFRWDATRKLWWRYAQLQDNAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29512; Mature: 29512
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENHILTCSESITELAKAMLQVQQRLVPVMKDTTNPFVGSRYASLNSVMEACREALNANG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC IWVVQYPVQVAPPIYEGAGCPQNLLGLVTKLVHAESGQWQSSLMVMPLPKADPQGYGSAL EEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHH TYARRYGLTTLVGLVTEVDDDAEGAMSRNQQPRSRAKSAPQSGVSWGETRSAQASQAGNN HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCC SKKSGRGASTGAAKKAVEIGSTDALQNLLSAQNSLPRIDGVSYQTIRAQDGRFCITASGD CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCC TRSKSTLLKEAGFRWDATRKLWWRYAQLQDNAA CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MENHILTCSESITELAKAMLQVQQRLVPVMKDTTNPFVGSRYASLNSVMEACREALNANG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC IWVVQYPVQVAPPIYEGAGCPQNLLGLVTKLVHAESGQWQSSLMVMPLPKADPQGYGSAL EEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHH TYARRYGLTTLVGLVTEVDDDAEGAMSRNQQPRSRAKSAPQSGVSWGETRSAQASQAGNN HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCC SKKSGRGASTGAAKKAVEIGSTDALQNLLSAQNSLPRIDGVSYQTIRAQDGRFCITASGD CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCC TRSKSTLLKEAGFRWDATRKLWWRYAQLQDNAA CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA