| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357927
Identifier: 78357927
GI number: 78357927
Start: 2873798
End: 2874655
Strand: Reverse
Name: 78357927
Synonym: Dde_2886
Alternate gene names: NA
Gene position: 2874655-2873798 (Counterclockwise)
Preceding gene: 78357928
Following gene: 78357926
Centisome position: 77.06
GC content: 38.81
Gene sequence:
>858_bases ATGAAAACTTGCATAGCACAATCTACTTCCATGAAACAAAAGTTAAAAAAATATATTAAGAAAGCAATTTCTCCTTTTTG GGGAACGTATTGGACCCAGCCAATTTATTCAAAGCTGCTCTATTTTGCTATGAGGGGAATGCATATTGGCGAAGGAACAG CATTTGATGCACCAGCAGAACATGCTGCTTTGAAGCATTTAAAGACCATTCTGAGAATAAATAATATTTCCAATCCTACT ATTTTTGATGTGGGAGCAAATGTTGGAGGATATACAACGCTTCTTAAAAATGTTTTTGGAGATAATTGCTACATTCACTC TTTTGAAGCTTCGCCTAATACAATGGAAGAACTACAAAGGACGCATTCTAATTCTGAAAATGTATCTCTTTGGAATCTTG CGCTTAGTAACTCTTCTGGAGTTGCACCGTTGTTTAGCACAGAAGGCAACTCAGGGCTTTCGTCATTGCATTACAGGCAC CTTACACATCATGGGATTACCCTTACAGAAGAATGCTCAGTCAACCTGCAAACTTTAGACGACTTCTGTTCCTCAGAAGG TATCGATAATATCCATTTTTTAAAGCTTGACACCGAGGGGCATGAGTTGGCGATATTGCAAGGTGCTAGCCGGATGCTTT CAGAAAATAAAATTGATGCAATTCAATTTGAGTTTGGAGGCTGCAATATTGATAGCCGTACTTTTTTCCGAGATTTTTTC AATCTGCTGCATAAGGATTATTCGATCTTCAGGTTAGTACGAAATGGCTTGTACCCTGTTAATGAATACTCTGAATTCTG TGAGATATTTTCCTGTACCAACTTTATGGCGATAAGTCGCAGGCTCCGCTCCCGTTAG
Upstream 100 bases:
>100_bases GCAAAAAAGGCTCATAGGGTCACTTTTAATTCATTTGCAACTAACTATGAAAATATAGTCAAGGACGCAATTAAATAGGC TTGTTAGGGATTTTCACAAA
Downstream 100 bases:
>100_bases CATGCAACAATCTCACTTTGTCAATAAACGGCTTGTGCGCCCTCTAGAGAACGTTTCCCGTCGTGTTGCAATCTGCTTTC TTGATCAATATAAACACCGC
Product: methyltransferase FkbM
Products: NA
Alternate protein names: Methyltransferase FkbM Family; Methyltransferase FkbM; Nodulation Protein NoeI- Methyltransferase; SAM-Dependent Methyltransferase; Lipopolysaccharide Biosynthesis Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKTCIAQSTSMKQKLKKYIKKAISPFWGTYWTQPIYSKLLYFAMRGMHIGEGTAFDAPAEHAALKHLKTILRINNISNPT IFDVGANVGGYTTLLKNVFGDNCYIHSFEASPNTMEELQRTHSNSENVSLWNLALSNSSGVAPLFSTEGNSGLSSLHYRH LTHHGITLTEECSVNLQTLDDFCSSEGIDNIHFLKLDTEGHELAILQGASRMLSENKIDAIQFEFGGCNIDSRTFFRDFF NLLHKDYSIFRLVRNGLYPVNEYSEFCEIFSCTNFMAISRRLRSR
Sequences:
>Translated_285_residues MKTCIAQSTSMKQKLKKYIKKAISPFWGTYWTQPIYSKLLYFAMRGMHIGEGTAFDAPAEHAALKHLKTILRINNISNPT IFDVGANVGGYTTLLKNVFGDNCYIHSFEASPNTMEELQRTHSNSENVSLWNLALSNSSGVAPLFSTEGNSGLSSLHYRH LTHHGITLTEECSVNLQTLDDFCSSEGIDNIHFLKLDTEGHELAILQGASRMLSENKIDAIQFEFGGCNIDSRTFFRDFF NLLHKDYSIFRLVRNGLYPVNEYSEFCEIFSCTNFMAISRRLRSR >Mature_285_residues MKTCIAQSTSMKQKLKKYIKKAISPFWGTYWTQPIYSKLLYFAMRGMHIGEGTAFDAPAEHAALKHLKTILRINNISNPT IFDVGANVGGYTTLLKNVFGDNCYIHSFEASPNTMEELQRTHSNSENVSLWNLALSNSSGVAPLFSTEGNSGLSSLHYRH LTHHGITLTEECSVNLQTLDDFCSSEGIDNIHFLKLDTEGHELAILQGASRMLSENKIDAIQFEFGGCNIDSRTFFRDFF NLLHKDYSIFRLVRNGLYPVNEYSEFCEIFSCTNFMAISRRLRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32297; Mature: 32297
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTCIAQSTSMKQKLKKYIKKAISPFWGTYWTQPIYSKLLYFAMRGMHIGEGTAFDAPAE CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH HAALKHLKTILRINNISNPTIFDVGANVGGYTTLLKNVFGDNCYIHSFEASPNTMEELQR HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH THSNSENVSLWNLALSNSSGVAPLFSTEGNSGLSSLHYRHLTHHGITLTEECSVNLQTLD HHCCCCCEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHH DFCSSEGIDNIHFLKLDTEGHELAILQGASRMLSENKIDAIQFEFGGCNIDSRTFFRDFF HHHHHCCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH NLLHKDYSIFRLVRNGLYPVNEYSEFCEIFSCTNFMAISRRLRSR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTCIAQSTSMKQKLKKYIKKAISPFWGTYWTQPIYSKLLYFAMRGMHIGEGTAFDAPAE CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH HAALKHLKTILRINNISNPTIFDVGANVGGYTTLLKNVFGDNCYIHSFEASPNTMEELQR HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH THSNSENVSLWNLALSNSSGVAPLFSTEGNSGLSSLHYRHLTHHGITLTEECSVNLQTLD HHCCCCCEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHH DFCSSEGIDNIHFLKLDTEGHELAILQGASRMLSENKIDAIQFEFGGCNIDSRTFFRDFF HHHHHCCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH NLLHKDYSIFRLVRNGLYPVNEYSEFCEIFSCTNFMAISRRLRSR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA