| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357919
Identifier: 78357919
GI number: 78357919
Start: 2867422
End: 2868192
Strand: Reverse
Name: 78357919
Synonym: Dde_2878
Alternate gene names: NA
Gene position: 2868192-2867422 (Counterclockwise)
Preceding gene: 78357920
Following gene: 78357918
Centisome position: 76.89
GC content: 47.6
Gene sequence:
>771_bases TTGTTAAGACAGTTGAAAGCGACGCTGAGCAAGGTCCCTGGCGGCCTTTTTCTTGCCAAGATTGTGTGGGGGGCTGTGTG CTATTTGCAATTCTGTATCGCATTTTGGCGATATGGACGATGGCTGGGAGACGGACGTTTTCCGTGCCGCTGGTCTACCC GCTGGCCATGCCTTTATGATGCGACTCCAAAGACGTCTGATTTTGATCCACACTATTTGTACCACACTGCTTGGGCGGTA CGCCACTTGGCGGCCAATTTGCCGGAAAAGCATGTGGATATTTCTTCCTGCCTTCGGTTTGTCACCATTGCTTCAGCGTT CGTTCCAATAGAATTTTATGATTACCGTCCTGCCGACATCAAACTGGACAGTCTGATGCTTGGTAAGGCAAACTTAACCA ATCTGCCTTTTGAAGATGCAAGCATCCTTTCGTTATCTTGTATGCATGTTGTTGAACATGTCGGGCTGGGACGTTACGGG GACCCGCTTGATCCTAAAGGGGATTGTCTCGCTGCAAGTGAGTTGCAGCGAGTTCTGGCTTATGAGGGCCGATTGATTTT TGTTGTTCCCGTAGGCGCACCTTCGTTAATGTATAATGCCCATCGTGTGTATTCTTACGCTCAGGTTGTCAGCCTTTTTC CAGAATTAAATGTCATTGAGTTTTCACTGATTACAGATGATGGAGTTTTTATCCCCAATGCAGATCTACGCATCGTTGAA GAGCAGCGCTACGGTTGTGGCTGCTTTGTTTTCAATAAACAGCAACGTTAG
Upstream 100 bases:
>100_bases TTCTTTTATTACAGACAGGTAGTGTCTGTTGTGTTTTTGCGCCCTGTTAAGCTGTTCGTTAAGCGCATGTTAAAAATTAG CCAGTAAGCGGGTAAGTAGT
Downstream 100 bases:
>100_bases AATGGTGTTGTTGTGAAATTTGTCGGTGTATGGATTCTCGGGGGGCTGGGGAACCAAATGTTTCAGTTTGCAGCTGCCTA CGCTCTTGCAAAGCGTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLRQLKATLSKVPGGLFLAKIVWGAVCYLQFCIAFWRYGRWLGDGRFPCRWSTRWPCLYDATPKTSDFDPHYLYHTAWAV RHLAANLPEKHVDISSCLRFVTIASAFVPIEFYDYRPADIKLDSLMLGKANLTNLPFEDASILSLSCMHVVEHVGLGRYG DPLDPKGDCLAASELQRVLAYEGRLIFVVPVGAPSLMYNAHRVYSYAQVVSLFPELNVIEFSLITDDGVFIPNADLRIVE EQRYGCGCFVFNKQQR
Sequences:
>Translated_256_residues MLRQLKATLSKVPGGLFLAKIVWGAVCYLQFCIAFWRYGRWLGDGRFPCRWSTRWPCLYDATPKTSDFDPHYLYHTAWAV RHLAANLPEKHVDISSCLRFVTIASAFVPIEFYDYRPADIKLDSLMLGKANLTNLPFEDASILSLSCMHVVEHVGLGRYG DPLDPKGDCLAASELQRVLAYEGRLIFVVPVGAPSLMYNAHRVYSYAQVVSLFPELNVIEFSLITDDGVFIPNADLRIVE EQRYGCGCFVFNKQQR >Mature_256_residues MLRQLKATLSKVPGGLFLAKIVWGAVCYLQFCIAFWRYGRWLGDGRFPCRWSTRWPCLYDATPKTSDFDPHYLYHTAWAV RHLAANLPEKHVDISSCLRFVTIASAFVPIEFYDYRPADIKLDSLMLGKANLTNLPFEDASILSLSCMHVVEHVGLGRYG DPLDPKGDCLAASELQRVLAYEGRLIFVVPVGAPSLMYNAHRVYSYAQVVSLFPELNVIEFSLITDDGVFIPNADLRIVE EQRYGCGCFVFNKQQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29055; Mature: 29055
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQLKATLSKVPGGLFLAKIVWGAVCYLQFCIAFWRYGRWLGDGRFPCRWSTRWPCLYD CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEC ATPKTSDFDPHYLYHTAWAVRHLAANLPEKHVDISSCLRFVTIASAFVPIEFYDYRPADI CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCE KLDSLMLGKANLTNLPFEDASILSLSCMHVVEHVGLGRYGDPLDPKGDCLAASELQRVLA EECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHH YEGRLIFVVPVGAPSLMYNAHRVYSYAQVVSLFPELNVIEFSLITDDGVFIPNADLRIVE HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCEEEEE EQRYGCGCFVFNKQQR CCCCCCEEEEEECCCC >Mature Secondary Structure MLRQLKATLSKVPGGLFLAKIVWGAVCYLQFCIAFWRYGRWLGDGRFPCRWSTRWPCLYD CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEC ATPKTSDFDPHYLYHTAWAVRHLAANLPEKHVDISSCLRFVTIASAFVPIEFYDYRPADI CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCE KLDSLMLGKANLTNLPFEDASILSLSCMHVVEHVGLGRYGDPLDPKGDCLAASELQRVLA EECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHH YEGRLIFVVPVGAPSLMYNAHRVYSYAQVVSLFPELNVIEFSLITDDGVFIPNADLRIVE HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCEEEEE EQRYGCGCFVFNKQQR CCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA