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The map label for this gene is dcrA [H]

Identifier: 78357855

GI number: 78357855

Start: 2799295

End: 2801463

Strand: Direct

Name: dcrA [H]

Synonym: Dde_2814

Alternate gene names: 78357855

Gene position: 2799295-2801463 (Clockwise)

Preceding gene: 78357853

Following gene: 78357859

Centisome position: 75.04

GC content: 59.01

Gene sequence:

>2169_bases
ATGACCATACGAACCAGATTCATAGCATCGCTTGCCGGCGTGCTGGCACTTACCGCCGTCATGTACGCGGCCAATCTGTA
TGTGATAGCCGGCCAGCGGTCAGACAGTGTTTCCATAAACCTTGCAGGACGGCAGCGCATGCTGGCCGAACTGATTACCG
GACGGGCCGTGGCGCTGATACACAGCGCACAGTCCGGCACTGACGATACCGCCTCCGAAAAGCTGCTCCGCCGGGCCGTC
AGCGCTTTTGAAACCACGCACAATGCTCTTTCGGGCAGGGGGCAGGCGCCCCTTTCTCTGGAACCTTCCGGCCCTTCGGC
AACGCTGGGGCAGCCTTCCGCCGCCACGCTGGCATTGCTGCGCAGAACCGACACGCTGTGGTCACAGCATAAAAAACTGG
TGGAGCGCGCACTGAAAGGCGACAGCCGTGCAGTACCCGACCTGCTGCAGATAACGCCGCGCCTGCGTGCCACTCTGAAC
GACGTGGTGCTGGCTTTGCAGCAGGAGGCAGAACAGCGCACATCTACGCTCACAGCCGTGCAGACGGCAGGGTCTGCCGC
CATTGTTCTGCTGGTGCTTGTCACTCTGTATGCCTGCATGCGTTCACTGCTGGCGCCGCTGGACAGGCTGCGGGCCTACG
CGCGCGACATCGCAGGCGGCAATCTGGACGCGCAGGCGCAGGGGCAATATGTATGCGAACTGGCCGACCTGAAGCACGAC
ATGACCACCATGGTGGAAAGCCTGAAGGCCACCATGCTGGAAGCCCGCAAAAATCATCAGGAAGCGGACGCCAGCGCACA
GCAGGCGCAAAAAACTCTGAAAGAAGCCCATGCACATCAGGCACAGGCGCAGGAACTGCTTGCCGCGGTAAACAATGCCA
GCACCAATGCCAGAGGCTTTTCCGAAAAAGTATACGCGGCAGTGGAAGAGCTTTCCGCACGCATCGAGCAGGTGAACGCC
AACGTGGACATCCAGCGCGACCGCATGATGGAAACAGCCACCGCCATGGAAGAAATGAACGGCACCGTGTACGAAGTGGC
CCGCAATGCCGCCGATGCAGCCGGCAGCGCCGCGCGTTCCAAAGAAAACGCCCAGACAGGCGCAAAGGGTGTGCACAGCG
CGGTGGAATCCATAACAATCATCGAAAAGCGTTTTCTGCATCTCAAGGAAACCATGGGGCAGCTGGGCGAACAGGCCAGA
AGCATCGGCACCATTATCACCACCATCAACGATATTGCCGACCAGACCAACCTGCTGGCGCTGAACGCAGCCATCGAAGC
TGCACGCGCCGGCGATGCAGGCCGCGGCTTTGCCGTGGTGGCCGATGAAGTCCGCAAGCTTGCCGAAAAAACCATGACCG
CCACCAAGGAAGTAAGCGAAAGCGTGCTGCTGATTCAGGAACGCACACGCGAAAACATGACCGCCGTGGAACAGACCGCC
GCAGACCTGGAAAACAGCACCCGCACCGCCAGTGAATCAGGTCGCTTCATGGAAGAAATAGTGCATCTTGTGGAAGACAC
AGCCGGACAGGTGGAGTCCATCGCCGCCGCGTCGGAAGAACAATCCGCCGCGTCGGAACAGATAAACCGCGCCGTTTCCG
ACGTGACCCGCGTGGCCACGGAAACAGCAGACGGCATGAATGCGGCGGCGCACGCCCTCATGGAGGTATCCGGCCTTGTG
GAAGAGCTGGACAGCATACTGCGCGACCTTGCCGCGCGGGGCAACGGCTCGGCTGTAACCGGTGCGGCCACGGCGGACAC
AGGGCAGCTTTTCCGCTGGACGGATGATCTCTCGGTCAAAATCAGTTCCATCGACGAACAGCATAAAGGACTGGTAAACC
TGATCAACGAACTGCACGAAGCCATGCGCCGGCGCAAAAGCGCAAGCCATCTCATAGCCATAGTCGGAAGGCTTAAAGAC
TATACCGTGTACCATTTCGATACCGAAGAAAAACTCTTCCACAAACACGGCTACCCGGCCACGGCGGAACATATACAGGA
ACACCGCAAGTTCGTGGAGAATGTACTGGCCTTTGAAAAAGACCTGCAGCAGGGCAAGGTTACCGTGACCATGGATGTCA
TGCGGTTTCTTAAAAACTGGCTCACGGGACATATCAAGGGCACGGACAAAAAATACAGCGGCTATCTGGTGCGCAAAGGC
GTGCGCTGA

Upstream 100 bases:

>100_bases
CTCATAATATAACAAGGCAGACCGTTCCGGGGGGAGGAATGCCGCTTCGTTCCACAGTTCGCCGAACACACTCTCCCTTG
CCCTTCTGCGCGAGGATACC

Downstream 100 bases:

>100_bases
ACAGCCGCCCCGCACGCGCATGACAGACTCCGCAGCCTTTCCAGCCCCGCTTTGGCGGGGCTTTTTCATGCCGCCGCACT
CTGCTTCCGCTCATGCAGCA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 721

Protein sequence:

>722_residues
MTIRTRFIASLAGVLALTAVMYAANLYVIAGQRSDSVSINLAGRQRMLAELITGRAVALIHSAQSGTDDTASEKLLRRAV
SAFETTHNALSGRGQAPLSLEPSGPSATLGQPSAATLALLRRTDTLWSQHKKLVERALKGDSRAVPDLLQITPRLRATLN
DVVLALQQEAEQRTSTLTAVQTAGSAAIVLLVLVTLYACMRSLLAPLDRLRAYARDIAGGNLDAQAQGQYVCELADLKHD
MTTMVESLKATMLEARKNHQEADASAQQAQKTLKEAHAHQAQAQELLAAVNNASTNARGFSEKVYAAVEELSARIEQVNA
NVDIQRDRMMETATAMEEMNGTVYEVARNAADAAGSAARSKENAQTGAKGVHSAVESITIIEKRFLHLKETMGQLGEQAR
SIGTIITTINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTATKEVSESVLLIQERTRENMTAVEQTA
ADLENSTRTASESGRFMEEIVHLVEDTAGQVESIAAASEEQSAASEQINRAVSDVTRVATETADGMNAAAHALMEVSGLV
EELDSILRDLAARGNGSAVTGAATADTGQLFRWTDDLSVKISSIDEQHKGLVNLINELHEAMRRRKSASHLIAIVGRLKD
YTVYHFDTEEKLFHKHGYPATAEHIQEHRKFVENVLAFEKDLQQGKVTVTMDVMRFLKNWLTGHIKGTDKKYSGYLVRKG
VR

Sequences:

>Translated_722_residues
MTIRTRFIASLAGVLALTAVMYAANLYVIAGQRSDSVSINLAGRQRMLAELITGRAVALIHSAQSGTDDTASEKLLRRAV
SAFETTHNALSGRGQAPLSLEPSGPSATLGQPSAATLALLRRTDTLWSQHKKLVERALKGDSRAVPDLLQITPRLRATLN
DVVLALQQEAEQRTSTLTAVQTAGSAAIVLLVLVTLYACMRSLLAPLDRLRAYARDIAGGNLDAQAQGQYVCELADLKHD
MTTMVESLKATMLEARKNHQEADASAQQAQKTLKEAHAHQAQAQELLAAVNNASTNARGFSEKVYAAVEELSARIEQVNA
NVDIQRDRMMETATAMEEMNGTVYEVARNAADAAGSAARSKENAQTGAKGVHSAVESITIIEKRFLHLKETMGQLGEQAR
SIGTIITTINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTATKEVSESVLLIQERTRENMTAVEQTA
ADLENSTRTASESGRFMEEIVHLVEDTAGQVESIAAASEEQSAASEQINRAVSDVTRVATETADGMNAAAHALMEVSGLV
EELDSILRDLAARGNGSAVTGAATADTGQLFRWTDDLSVKISSIDEQHKGLVNLINELHEAMRRRKSASHLIAIVGRLKD
YTVYHFDTEEKLFHKHGYPATAEHIQEHRKFVENVLAFEKDLQQGKVTVTMDVMRFLKNWLTGHIKGTDKKYSGYLVRKG
VR
>Mature_721_residues
TIRTRFIASLAGVLALTAVMYAANLYVIAGQRSDSVSINLAGRQRMLAELITGRAVALIHSAQSGTDDTASEKLLRRAVS
AFETTHNALSGRGQAPLSLEPSGPSATLGQPSAATLALLRRTDTLWSQHKKLVERALKGDSRAVPDLLQITPRLRATLND
VVLALQQEAEQRTSTLTAVQTAGSAAIVLLVLVTLYACMRSLLAPLDRLRAYARDIAGGNLDAQAQGQYVCELADLKHDM
TTMVESLKATMLEARKNHQEADASAQQAQKTLKEAHAHQAQAQELLAAVNNASTNARGFSEKVYAAVEELSARIEQVNAN
VDIQRDRMMETATAMEEMNGTVYEVARNAADAAGSAARSKENAQTGAKGVHSAVESITIIEKRFLHLKETMGQLGEQARS
IGTIITTINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTATKEVSESVLLIQERTRENMTAVEQTAA
DLENSTRTASESGRFMEEIVHLVEDTAGQVESIAAASEEQSAASEQINRAVSDVTRVATETADGMNAAAHALMEVSGLVE
ELDSILRDLAARGNGSAVTGAATADTGQLFRWTDDLSVKISSIDEQHKGLVNLINELHEAMRRRKSASHLIAIVGRLKDY
TVYHFDTEEKLFHKHGYPATAEHIQEHRKFVENVLAFEKDLQQGKVTVTMDVMRFLKNWLTGHIKGTDKKYSGYLVRKGV
R

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=347, Percent_Identity=30.5475504322767, Blast_Score=130, Evalue=4e-31,
Organism=Escherichia coli, GI2367378, Length=356, Percent_Identity=30.8988764044944, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787690, Length=452, Percent_Identity=29.2035398230088, Blast_Score=113, Evalue=5e-26,
Organism=Escherichia coli, GI1788194, Length=370, Percent_Identity=29.4594594594595, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1789453, Length=284, Percent_Identity=29.2253521126761, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 78195; Mature: 78064

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50885 HAMP ; PS00550 HEMERYTHRINS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRTRFIASLAGVLALTAVMYAANLYVIAGQRSDSVSINLAGRQRMLAELITGRAVALI
CCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECHHHHHHHHHHCCCHHHEE
HSAQSGTDDTASEKLLRRAVSAFETTHNALSGRGQAPLSLEPSGPSATLGQPSAATLALL
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHH
RRTDTLWSQHKKLVERALKGDSRAVPDLLQITPRLRATLNDVVLALQQEAEQRTSTLTAV
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTAGSAAIVLLVLVTLYACMRSLLAPLDRLRAYARDIAGGNLDAQAQGQYVCELADLKHD
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
MTTMVESLKATMLEARKNHQEADASAQQAQKTLKEAHAHQAQAQELLAAVNNASTNARGF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SEKVYAAVEELSARIEQVNANVDIQRDRMMETATAMEEMNGTVYEVARNAADAAGSAARS
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHC
KENAQTGAKGVHSAVESITIIEKRFLHLKETMGQLGEQARSIGTIITTINDIADQTNLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEE
LNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTATKEVSESVLLIQERTRENMTAVEQTA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADLENSTRTASESGRFMEEIVHLVEDTAGQVESIAAASEEQSAASEQINRAVSDVTRVAT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETADGMNAAAHALMEVSGLVEELDSILRDLAARGNGSAVTGAATADTGQLFRWTDDLSVK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEECCCCEEE
ISSIDEQHKGLVNLINELHEAMRRRKSASHLIAIVGRLKDYTVYHFDTEEKLFHKHGYPA
EHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCH
TAEHIQEHRKFVENVLAFEKDLQQGKVTVTMDVMRFLKNWLTGHIKGTDKKYSGYLVRKG
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
VR
CC
>Mature Secondary Structure 
TIRTRFIASLAGVLALTAVMYAANLYVIAGQRSDSVSINLAGRQRMLAELITGRAVALI
CCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECHHHHHHHHHHCCCHHHEE
HSAQSGTDDTASEKLLRRAVSAFETTHNALSGRGQAPLSLEPSGPSATLGQPSAATLALL
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHH
RRTDTLWSQHKKLVERALKGDSRAVPDLLQITPRLRATLNDVVLALQQEAEQRTSTLTAV
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTAGSAAIVLLVLVTLYACMRSLLAPLDRLRAYARDIAGGNLDAQAQGQYVCELADLKHD
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
MTTMVESLKATMLEARKNHQEADASAQQAQKTLKEAHAHQAQAQELLAAVNNASTNARGF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SEKVYAAVEELSARIEQVNANVDIQRDRMMETATAMEEMNGTVYEVARNAADAAGSAARS
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHC
KENAQTGAKGVHSAVESITIIEKRFLHLKETMGQLGEQARSIGTIITTINDIADQTNLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEE
LNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTATKEVSESVLLIQERTRENMTAVEQTA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADLENSTRTASESGRFMEEIVHLVEDTAGQVESIAAASEEQSAASEQINRAVSDVTRVAT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETADGMNAAAHALMEVSGLVEELDSILRDLAARGNGSAVTGAATADTGQLFRWTDDLSVK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEECCCCEEE
ISSIDEQHKGLVNLINELHEAMRRRKSASHLIAIVGRLKDYTVYHFDTEEKLFHKHGYPA
EHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCH
TAEHIQEHRKFVENVLAFEKDLQQGKVTVTMDVMRFLKNWLTGHIKGTDKKYSGYLVRKG
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
VR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]