| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is trxA [H]
Identifier: 78357823
GI number: 78357823
Start: 2781342
End: 2781605
Strand: Direct
Name: trxA [H]
Synonym: Dde_2781
Alternate gene names: 78357823
Gene position: 2781342-2781605 (Clockwise)
Preceding gene: 78357822
Following gene: 78357824
Centisome position: 74.56
GC content: 50.76
Gene sequence:
>264_bases ATGGTCGATCTAGGAGCTCACAGTTGCATCCCGTGCAAAATGATGGCTCCGATCATCAAGGAGCTGTCCGCTGAATATAG CGGGAGAGCTGCCATTGTGTTCATCGATGTTTGGGAAAACCCTAACGTTCCGCCGCAATTCGGCCTTAGAGCCATTCCTA CCCAGATATTCTATGACGCGGAAGGCAAGGAACGATTCCGGCACGAAGGCTTCATGGATAAGGAGTCCATCGTCGAAAAG CTGAAAAAGCTTGGGGTGAACTAG
Upstream 100 bases:
>100_bases TGTCACGGGCCAAAAAGAAACCCTCGCAAGCTCAGGCACAATCGTAGCAGACCTGATCTCAGGCGCTCCACAAACTGTGC CCATTCCAGGGACAGTGACA
Downstream 100 bases:
>100_bases TCAATGGACCAGATATTCATCCTCATCAATCAATGGATGACCGGCGGGGTACTGCTCGGAGCGTTGGGGTGCTTCCTTTG GGGCATGGTCAGCGTTTTGT
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MVDLGAHSCIPCKMMAPIIKELSAEYSGRAAIVFIDVWENPNVPPQFGLRAIPTQIFYDAEGKERFRHEGFMDKESIVEK LKKLGVN
Sequences:
>Translated_87_residues MVDLGAHSCIPCKMMAPIIKELSAEYSGRAAIVFIDVWENPNVPPQFGLRAIPTQIFYDAEGKERFRHEGFMDKESIVEK LKKLGVN >Mature_87_residues MVDLGAHSCIPCKMMAPIIKELSAEYSGRAAIVFIDVWENPNVPPQFGLRAIPTQIFYDAEGKERFRHEGFMDKESIVEK LKKLGVN
Specific function: Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI87082331, Length=58, Percent_Identity=39.6551724137931, Blast_Score=62, Evalue=7e-12,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 9824; Mature: 9824
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLGAHSCIPCKMMAPIIKELSAEYSGRAAIVFIDVWENPNVPPQFGLRAIPTQIFYDA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEECCHHEEECC EGKERFRHEGFMDKESIVEKLKKLGVN CCHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MVDLGAHSCIPCKMMAPIIKELSAEYSGRAAIVFIDVWENPNVPPQFGLRAIPTQIFYDA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEECCHHEEECC EGKERFRHEGFMDKESIVEKLKKLGVN CCHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]