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The map label for this gene is recJ [H]

Identifier: 78357757

GI number: 78357757

Start: 2716779

End: 2718485

Strand: Reverse

Name: recJ [H]

Synonym: Dde_2715

Alternate gene names: 78357757

Gene position: 2718485-2716779 (Counterclockwise)

Preceding gene: 78357758

Following gene: 78357752

Centisome position: 72.88

GC content: 61.86

Gene sequence:

>1707_bases
GTGGCTAAAAACTGGATACCGCGCGGAACAGAACCTCTGCCCGGTGAAACGGCCCTGTGGGCTGAGCGTCTGGGTGTTTC
CGAACTGCTGGTGCAACTGCTGTGGACACGGGGCCTGCACACGCCTGAAGACATGGATGTGTATCTGAGCCCGGGGCTGC
GCCACCTCGCCCCGCCGGACTGCTGGCCGGGACTTGCACAGGCGGCCGCAGTGCTGGATGACGGGCTGGCGCAGGGACTG
CCGTTTGCCGTATGGGGCGACTACGACGTGGACGGCGTGACATCCGTCGCGCTGGTTAAAAGTTTTCTGGCCGCGCACGG
CATCGCGGCGCGCCATCATATTCCCAACCGCTTTGAAGAAGGCTACGGCATGAACGTGGCATGGGTGGAGCGGCTGGCGC
AGGAGGGGGTGCGTCTGCTGCTGACTGTGGACTGCGGCATATCCGACCATGAATCCGTTGCCCGTGCCCGCGAACTGGGA
ATGACCGTGGTTGTTTCCGACCACCATCTGCCGGGTGAAAGTCTGCCGCAGGCACACGCCATCTGCAACCCGCGTCTGGC
GGACTGCCCCTGTCCTGCGCTGGCAGGAGTTGGCGTGGCGTTTTTTCTCATGGCTGCACTCAACAGCAGGCTGGCACAGC
GCACCGGTGTAAAAGCGGATATCCGCCCCCTGCTTGATCTGGTGGCGCTGGGCACCATTGCCGATGTGGTCGATCTTTCC
GGTCAGAACAGGATTCTGGTGAAAAACGGCCTGCTGGTAATGACTGAAGCGGGACGCCCCGGCATAGCCGCGCTGAAGGA
AGTGAGCGGATACAGTGTTTCCGCCTCTCTGGGTGCCGGTCAGGTTGCTTTCGGACTGGCACCGCGCATCAATGCGGCAG
GCAGGCTGGGAGAAGCTGATACGGCTCTTTCGCTGCTGCTGGCACCGGACTATGCGGCGGCTGCTCCGCTTGCCGCCCGT
CTGGATGCCATGAATCAGGAACGCAAAGAAGAGGAAGAGCGCATTCTGGAGGAAGCCAGAGAGCAGGCCGCAGCACAGCA
GGACCGGATGGGACTGGTATTGTACGCGCCCCACTGGCATGCGGGTGTCATAGGCATTGTGGCTTCACGCATTGTGGAAG
AGTTTTACCGCCCCACGCTTATCCTGTGCGATGAGGGCGGCGTGGTGAAAGGCTCGGGCCGCAGCACGGCGGAATTTCAT
CTGCACGAGGGACTGACCCGCTGCGCTGACCTGCTGCTGGGCTTTGGCGGACACCGGCAGGCGGCAGGCATGAGTCTTGA
CCACGCCGGAGTTGATGCCCTGCGTGAGCGCTTTCATGCCGTTGTGGTCGAGTCTTGCGGTCCGCATCCTCTGACGGCGT
CGCTCAAGGTGGATGCCGAGCTTGGTTTTGCGCGGGCTTCCGATTTTGCCATGCTCAAGGAGCTGGAACTGCTGCAGCCG
TTCGGCATGGGTAACGCGGAACCGACATTTTCGTCACCTGTGCTTGAAGTGCGCGGTAACCGCCGGTTCGGCAAAAATCA
TATGCAGCTGGAACTGCTGGACCCGTCATGCGGGGTGACCCTGCGGGCAAAGGCATGGCGGCAGGCCGATAACCTGCCAC
GCGACATGCGCGGCAGAAAAATGCGTCTTGCCTACACTCCGCGCATCGACAGATACAACGGCCTTGCCTCGGTTGATCTG
CGCATCAAGGACTGGGAACTTTTCTGA

Upstream 100 bases:

>100_bases
TGACATTCTGGAATATTCATGCGGTGGCCCGCAATGTGGGATACTCCCATGCGGCGGCCTGCCGTTGTTTTTTTGTTTTT
TATAAAGAGATGAGGCTGTT

Downstream 100 bases:

>100_bases
GCGAAGAGGCGGAGCGCCGCGCACCTTTTTCCGACAGCGGATATGCAGACAGCCGGATGTTCTGAAAACATCCGGCTGTT
GTGTTATATGCCTGCCTGTG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MAKNWIPRGTEPLPGETALWAERLGVSELLVQLLWTRGLHTPEDMDVYLSPGLRHLAPPDCWPGLAQAAAVLDDGLAQGL
PFAVWGDYDVDGVTSVALVKSFLAAHGIAARHHIPNRFEEGYGMNVAWVERLAQEGVRLLLTVDCGISDHESVARARELG
MTVVVSDHHLPGESLPQAHAICNPRLADCPCPALAGVGVAFFLMAALNSRLAQRTGVKADIRPLLDLVALGTIADVVDLS
GQNRILVKNGLLVMTEAGRPGIAALKEVSGYSVSASLGAGQVAFGLAPRINAAGRLGEADTALSLLLAPDYAAAAPLAAR
LDAMNQERKEEEERILEEAREQAAAQQDRMGLVLYAPHWHAGVIGIVASRIVEEFYRPTLILCDEGGVVKGSGRSTAEFH
LHEGLTRCADLLLGFGGHRQAAGMSLDHAGVDALRERFHAVVVESCGPHPLTASLKVDAELGFARASDFAMLKELELLQP
FGMGNAEPTFSSPVLEVRGNRRFGKNHMQLELLDPSCGVTLRAKAWRQADNLPRDMRGRKMRLAYTPRIDRYNGLASVDL
RIKDWELF

Sequences:

>Translated_568_residues
MAKNWIPRGTEPLPGETALWAERLGVSELLVQLLWTRGLHTPEDMDVYLSPGLRHLAPPDCWPGLAQAAAVLDDGLAQGL
PFAVWGDYDVDGVTSVALVKSFLAAHGIAARHHIPNRFEEGYGMNVAWVERLAQEGVRLLLTVDCGISDHESVARARELG
MTVVVSDHHLPGESLPQAHAICNPRLADCPCPALAGVGVAFFLMAALNSRLAQRTGVKADIRPLLDLVALGTIADVVDLS
GQNRILVKNGLLVMTEAGRPGIAALKEVSGYSVSASLGAGQVAFGLAPRINAAGRLGEADTALSLLLAPDYAAAAPLAAR
LDAMNQERKEEEERILEEAREQAAAQQDRMGLVLYAPHWHAGVIGIVASRIVEEFYRPTLILCDEGGVVKGSGRSTAEFH
LHEGLTRCADLLLGFGGHRQAAGMSLDHAGVDALRERFHAVVVESCGPHPLTASLKVDAELGFARASDFAMLKELELLQP
FGMGNAEPTFSSPVLEVRGNRRFGKNHMQLELLDPSCGVTLRAKAWRQADNLPRDMRGRKMRLAYTPRIDRYNGLASVDL
RIKDWELF
>Mature_567_residues
AKNWIPRGTEPLPGETALWAERLGVSELLVQLLWTRGLHTPEDMDVYLSPGLRHLAPPDCWPGLAQAAAVLDDGLAQGLP
FAVWGDYDVDGVTSVALVKSFLAAHGIAARHHIPNRFEEGYGMNVAWVERLAQEGVRLLLTVDCGISDHESVARARELGM
TVVVSDHHLPGESLPQAHAICNPRLADCPCPALAGVGVAFFLMAALNSRLAQRTGVKADIRPLLDLVALGTIADVVDLSG
QNRILVKNGLLVMTEAGRPGIAALKEVSGYSVSASLGAGQVAFGLAPRINAAGRLGEADTALSLLLAPDYAAAAPLAARL
DAMNQERKEEEERILEEAREQAAAQQDRMGLVLYAPHWHAGVIGIVASRIVEEFYRPTLILCDEGGVVKGSGRSTAEFHL
HEGLTRCADLLLGFGGHRQAAGMSLDHAGVDALRERFHAVVVESCGPHPLTASLKVDAELGFARASDFAMLKELELLQPF
GMGNAEPTFSSPVLEVRGNRRFGKNHMQLELLDPSCGVTLRAKAWRQADNLPRDMRGRKMRLAYTPRIDRYNGLASVDLR
IKDWELF

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=558, Percent_Identity=37.4551971326165, Blast_Score=300, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61380; Mature: 61249

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNWIPRGTEPLPGETALWAERLGVSELLVQLLWTRGLHTPEDMDVYLSPGLRHLAPPD
CCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC
CWPGLAQAAAVLDDGLAQGLPFAVWGDYDVDGVTSVALVKSFLAAHGIAARHHIPNRFEE
CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHC
GYGMNVAWVERLAQEGVRLLLTVDCGISDHESVARARELGMTVVVSDHHLPGESLPQAHA
CCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHH
ICNPRLADCPCPALAGVGVAFFLMAALNSRLAQRTGVKADIRPLLDLVALGTIADVVDLS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
GQNRILVKNGLLVMTEAGRPGIAALKEVSGYSVSASLGAGQVAFGLAPRINAAGRLGEAD
CCCEEEEECCEEEEECCCCCCHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCCCCHH
TALSLLLAPDYAAAAPLAARLDAMNQERKEEEERILEEAREQAAAQQDRMGLVLYAPHWH
HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH
AGVIGIVASRIVEEFYRPTLILCDEGGVVKGSGRSTAEFHLHEGLTRCADLLLGFGGHRQ
HHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
AAGMSLDHAGVDALRERFHAVVVESCGPHPLTASLKVDAELGFARASDFAMLKELELLQP
HCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC
FGMGNAEPTFSSPVLEVRGNRRFGKNHMQLELLDPSCGVTLRAKAWRQADNLPRDMRGRK
CCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHCCCCHHHCCCE
MRLAYTPRIDRYNGLASVDLRIKDWELF
EEEEECCCCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure 
AKNWIPRGTEPLPGETALWAERLGVSELLVQLLWTRGLHTPEDMDVYLSPGLRHLAPPD
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC
CWPGLAQAAAVLDDGLAQGLPFAVWGDYDVDGVTSVALVKSFLAAHGIAARHHIPNRFEE
CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHC
GYGMNVAWVERLAQEGVRLLLTVDCGISDHESVARARELGMTVVVSDHHLPGESLPQAHA
CCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHH
ICNPRLADCPCPALAGVGVAFFLMAALNSRLAQRTGVKADIRPLLDLVALGTIADVVDLS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
GQNRILVKNGLLVMTEAGRPGIAALKEVSGYSVSASLGAGQVAFGLAPRINAAGRLGEAD
CCCEEEEECCEEEEECCCCCCHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCCCCHH
TALSLLLAPDYAAAAPLAARLDAMNQERKEEEERILEEAREQAAAQQDRMGLVLYAPHWH
HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH
AGVIGIVASRIVEEFYRPTLILCDEGGVVKGSGRSTAEFHLHEGLTRCADLLLGFGGHRQ
HHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
AAGMSLDHAGVDALRERFHAVVVESCGPHPLTASLKVDAELGFARASDFAMLKELELLQP
HCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC
FGMGNAEPTFSSPVLEVRGNRRFGKNHMQLELLDPSCGVTLRAKAWRQADNLPRDMRGRK
CCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHCCCCHHHCCCE
MRLAYTPRIDRYNGLASVDLRIKDWELF
EEEEECCCCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]