| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is fur [H]
Identifier: 78357718
GI number: 78357718
Start: 2685553
End: 2685999
Strand: Reverse
Name: fur [H]
Synonym: Dde_2676
Alternate gene names: 78357718
Gene position: 2685999-2685553 (Counterclockwise)
Preceding gene: 78357719
Following gene: 78357717
Centisome position: 72.01
GC content: 53.69
Gene sequence:
>447_bases ATGAAAGATCCGTTACAGGTATTCACGGATTACATCGTTGCCAACGGCCTGAAAATGACCCCGCAACGGATGTTGATTGT GGATGTGTTTCTGCGGGAGGATGGCCACCTTACCACCGAGGAGTTGTACGAGAAGGTCAAGCGTGAAGACCCTTCCGTGG GACAGGCCACTGTGTACCGCACCATGAAGCTGCTCAGCGAATCGGGCATAGCCAAGGAAGTCCGCTTCGGCGACGGGGTG GCCCGGTATGAGCAGAAGTACGGCAGCAAGCACCATGACCATCTTATCTGCGAAACCTGCGGCAGAAATATCGAGGTGCT GGACGAGCACATTGAGCTGCTTCAGGAAGAGCTGGCCGCGAAACACGGCTTTGTGCTGACCAGCCACAGGATGTACCTGT ACGGTGAGTGCAGAGAATGCCGTGACAAAAAAAAGAAGAAATCATAA
Upstream 100 bases:
>100_bases CGGAACGGCTGGGCAGTGAAGAGCATTATGTAATCCGCAAGGTTGCGTATTGTCAGTCTTGCGGATACTGTCCGGTCATA CAGAGCCTCTGGAGTCGCCT
Downstream 100 bases:
>100_bases CGCCGCCCTGCGGGGCGCCGCGTGCCGTATAGCAGGGCGGGCCGGTTACCGGTCCGCCCTTTTGCACGGTACGCGGGCAG CTGAAAGGACAGGTATATAT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKDPLQVFTDYIVANGLKMTPQRMLIVDVFLREDGHLTTEELYEKVKREDPSVGQATVYRTMKLLSESGIAKEVRFGDGV ARYEQKYGSKHHDHLICETCGRNIEVLDEHIELLQEELAAKHGFVLTSHRMYLYGECRECRDKKKKKS
Sequences:
>Translated_148_residues MKDPLQVFTDYIVANGLKMTPQRMLIVDVFLREDGHLTTEELYEKVKREDPSVGQATVYRTMKLLSESGIAKEVRFGDGV ARYEQKYGSKHHDHLICETCGRNIEVLDEHIELLQEELAAKHGFVLTSHRMYLYGECRECRDKKKKKS >Mature_148_residues MKDPLQVFTDYIVANGLKMTPQRMLIVDVFLREDGHLTTEELYEKVKREDPSVGQATVYRTMKLLSESGIAKEVRFGDGV ARYEQKYGSKHHDHLICETCGRNIEVLDEHIELLQEELAAKHGFVLTSHRMYLYGECRECRDKKKKKS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=130, Percent_Identity=42.3076923076923, Blast_Score=98, Evalue=2e-22,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17191; Mature: 17191
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDPLQVFTDYIVANGLKMTPQRMLIVDVFLREDGHLTTEELYEKVKREDPSVGQATVYR CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHH TMKLLSESGIAKEVRFGDGVARYEQKYGSKHHDHLICETCGRNIEVLDEHIELLQEELAA HHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH KHGFVLTSHRMYLYGECRECRDKKKKKS HCCEEEECCCEEEEECHHHHHHHHHCCC >Mature Secondary Structure MKDPLQVFTDYIVANGLKMTPQRMLIVDVFLREDGHLTTEELYEKVKREDPSVGQATVYR CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHH TMKLLSESGIAKEVRFGDGVARYEQKYGSKHHDHLICETCGRNIEVLDEHIELLQEELAA HHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH KHGFVLTSHRMYLYGECRECRDKKKKKS HCCEEEECCCEEEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]