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The map label for this gene is dcyD [H]

Identifier: 78357623

GI number: 78357623

Start: 2598064

End: 2599065

Strand: Reverse

Name: dcyD [H]

Synonym: Dde_2581

Alternate gene names: 78357623

Gene position: 2599065-2598064 (Counterclockwise)

Preceding gene: 78357624

Following gene: 78357622

Centisome position: 69.68

GC content: 55.79

Gene sequence:

>1002_bases
ATGAATCTGGCAAAATTCCCCCGCCGCGGCTATGTGCAGCAGGCAACTCCCATCGAAAAACTGGATAACTTTTCCGCCGC
GCTGGGCGGTAAGGTGCAGATTTATATCAAACGTGACGACCTGCTTCCCGGTTGTGCCGGCGGCAACAAGACCCGCAAGC
TTGATTTCTGCATTGCAGACGCGCTTGAACAGGGTGCTGATACTATCATCACCTGCGGGGCTGTACAGTCCAACCACTGC
CGTCTTACTCTTGCCTGGGCGGTTAAAGAAGGCATGGACTGCCATCTGGTGCTTGAAGAGCGCGTAAAGGGCAGCTACAA
GCCGCAGGGATCGGGCAACAACCTGCTTTTCCACCTTATGGGTGTCAAAAGCATTACTGTGGTTCCCGGCGGTTCCGACA
TGATGGAGGCAATGACCAAGGTTGCCGGAACTCTGAAAGAACAGGGCAGGAACCCCTACATTATCCCCGGCGGCGCATCC
AACACCATAGGTGCCACAGGGTATGTTGCCTGCGCTCAGGAAATGATGCAGCAGCTTTTTGAACAGGGCATCAACATCGA
CCACATGGTGGTTCCCAGTGGCAGCGCAGGCACACATGCAGGTATTGTTGTGGGCATGGCCGCCACCAATTCCGGCATTC
CGGTAAGCGGCGTCAACGTGAGCCGCACCAAACCTGTTCAGGAAGAGCTGGTGCATAAGCTGGCCTGTGCCACTGCAGAA
CGTGTCGGCGTAAGCGGCGGCATTGCCCGTGAAGAAGTGGTATGCTTTGACGGTTACGTGGGCGCAGGATACTCTCTGCC
CACAGATTCCATGGTCGAGGCTGTCAAACTGCTTGCTTCCACCGAAGGCATTCTGCTCGACCCCGTATATTCCGGTAAAG
CCATGGCCGGCCTTATCGACCTTGTGCGCAAAGGTCATTTCCCCGAAGGTTCGAACGTGCTTTTCCTGCATACCGGCGGC
TCGCCCGCGCTGTATGCGTACACCGATACCTTTATGGAATAA

Upstream 100 bases:

>100_bases
CCCGCAGCGCCGTGCAGGTGGCTGCACTGCCTCTGAAGGCCGATGTGGAAATAGAAGCAATCATCAGGATTGCCGAATAG
TAACAGGATGAGGTGATATC

Downstream 100 bases:

>100_bases
GACTCAGAGCCGCATCCGCTTTGCGCGGGTGCGGCTTTTTTGCAAGGGAAGAGGGGTTTTCCCGCATTGCAGCACCGCGG
GTTACAGCACCGCGACATAC

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNLAKFPRRGYVQQATPIEKLDNFSAALGGKVQIYIKRDDLLPGCAGGNKTRKLDFCIADALEQGADTIITCGAVQSNHC
RLTLAWAVKEGMDCHLVLEERVKGSYKPQGSGNNLLFHLMGVKSITVVPGGSDMMEAMTKVAGTLKEQGRNPYIIPGGAS
NTIGATGYVACAQEMMQQLFEQGINIDHMVVPSGSAGTHAGIVVGMAATNSGIPVSGVNVSRTKPVQEELVHKLACATAE
RVGVSGGIAREEVVCFDGYVGAGYSLPTDSMVEAVKLLASTEGILLDPVYSGKAMAGLIDLVRKGHFPEGSNVLFLHTGG
SPALYAYTDTFME

Sequences:

>Translated_333_residues
MNLAKFPRRGYVQQATPIEKLDNFSAALGGKVQIYIKRDDLLPGCAGGNKTRKLDFCIADALEQGADTIITCGAVQSNHC
RLTLAWAVKEGMDCHLVLEERVKGSYKPQGSGNNLLFHLMGVKSITVVPGGSDMMEAMTKVAGTLKEQGRNPYIIPGGAS
NTIGATGYVACAQEMMQQLFEQGINIDHMVVPSGSAGTHAGIVVGMAATNSGIPVSGVNVSRTKPVQEELVHKLACATAE
RVGVSGGIAREEVVCFDGYVGAGYSLPTDSMVEAVKLLASTEGILLDPVYSGKAMAGLIDLVRKGHFPEGSNVLFLHTGG
SPALYAYTDTFME
>Mature_333_residues
MNLAKFPRRGYVQQATPIEKLDNFSAALGGKVQIYIKRDDLLPGCAGGNKTRKLDFCIADALEQGADTIITCGAVQSNHC
RLTLAWAVKEGMDCHLVLEERVKGSYKPQGSGNNLLFHLMGVKSITVVPGGSDMMEAMTKVAGTLKEQGRNPYIIPGGAS
NTIGATGYVACAQEMMQQLFEQGINIDHMVVPSGSAGTHAGIVVGMAATNSGIPVSGVNVSRTKPVQEELVHKLACATAE
RVGVSGGIAREEVVCFDGYVGAGYSLPTDSMVEAVKLLASTEGILLDPVYSGKAMAGLIDLVRKGHFPEGSNVLFLHTGG
SPALYAYTDTFME

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=327, Percent_Identity=45.8715596330275, Blast_Score=259, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35143; Mature: 35143

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLAKFPRRGYVQQATPIEKLDNFSAALGGKVQIYIKRDDLLPGCAGGNKTRKLDFCIAD
CCCCCCCCCCCCCCCCCHHHHHCHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEHHHHHH
ALEQGADTIITCGAVQSNHCRLTLAWAVKEGMDCHLVLEERVKGSYKPQGSGNNLLFHLM
HHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCEEEEEE
GVKSITVVPGGSDMMEAMTKVAGTLKEQGRNPYIIPGGASNTIGATGYVACAQEMMQQLF
CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
EQGINIDHMVVPSGSAGTHAGIVVGMAATNSGIPVSGVNVSRTKPVQEELVHKLACATAE
HCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RVGVSGGIAREEVVCFDGYVGAGYSLPTDSMVEAVKLLASTEGILLDPVYSGKAMAGLID
HCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LVRKGHFPEGSNVLFLHTGGSPALYAYTDTFME
HHHCCCCCCCCCEEEEEECCCCEEEEECHHHCC
>Mature Secondary Structure
MNLAKFPRRGYVQQATPIEKLDNFSAALGGKVQIYIKRDDLLPGCAGGNKTRKLDFCIAD
CCCCCCCCCCCCCCCCCHHHHHCHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEHHHHHH
ALEQGADTIITCGAVQSNHCRLTLAWAVKEGMDCHLVLEERVKGSYKPQGSGNNLLFHLM
HHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCEEEEEE
GVKSITVVPGGSDMMEAMTKVAGTLKEQGRNPYIIPGGASNTIGATGYVACAQEMMQQLF
CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
EQGINIDHMVVPSGSAGTHAGIVVGMAATNSGIPVSGVNVSRTKPVQEELVHKLACATAE
HCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RVGVSGGIAREEVVCFDGYVGAGYSLPTDSMVEAVKLLASTEGILLDPVYSGKAMAGLID
HCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LVRKGHFPEGSNVLFLHTGGSPALYAYTDTFME
HHHCCCCCCCCCEEEEEECCCCEEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA