| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357622
Identifier: 78357622
GI number: 78357622
Start: 2596516
End: 2597937
Strand: Reverse
Name: 78357622
Synonym: Dde_2580
Alternate gene names: NA
Gene position: 2597937-2596516 (Counterclockwise)
Preceding gene: 78357623
Following gene: 78357616
Centisome position: 69.65
GC content: 57.81
Gene sequence:
>1422_bases ATGGAACAGCATAACATGGATACACGCCTGGAACTGTATGGCGGCATATGGGGCGGCCTTGTGCCCCTTATCGTTCTGGT CGGCGGACTGGTATGGCTTTCTGTGGAGGAGATGGGCGGCACGAAGCCTTTCTGGGCCTGTGGCTGGCTGGCCATTGTGG CCGGATTGTTTTTTGCCAAAAACAAGCACGAGTACTGCCGTGCGGCCATGCGCGGCATTGGTGATAAAACGGGTATCGTC ATTGTTACGGCGTGGTTGTTTGCCGGTGTTTTCGGCAAACTGATGGTAGGCGGCGGGCTGGTGAACGGTCTGCTGTGGCT GGGTATGACCACGGGTGCGCAGGGAGCTGTGTTTACACTGATGGTGTTTGTCGCCGCGGCGCTTTTTGCTCTTGGCACCG GCACCAGCACCGGCACATGCATCGCGCTGACACCGGTACTTTTTCCTGCGGGCTGCTTCCTCGGCGCTGACCCTGCCCTG CTGGCCACTGCCATACTTTCGGGCGCCGCCTTCGGCGACAACCTTGCCCCCATTTCAGATACTACAATTGTTTCGGCATA TACGCAGGGCGCCACCATGCGTGATGTTGTGCGCAGCCGTTTTCCGCTGGCCATGGCGGCAGCCACCATTGCAAGCGCCA TATTCCTGCTGTTCGGCGGCGGCGGTACGGTAAAGCCCCTGCCTGAACTTCAGGCTCAGATGGATCCTTCCGGCGCGCTG ATGCTGCTTGCCCTGGCCACTGTTGTCATTTCCGCTCTCATGGGCAGACACATCATTGAATCGCTTATTTACGGCAACAT AGCAGCCGCTGTGGTGGGTGTTTTCAACGGCAACCTGCTCATCGGTGATATTTTCAGCATTCCTGCCAAGCGCGGCATAA GCACCGGACTCATTCAGGACGGTATAAGCGGTGTGGTGGGAGCCATCATTTTTGCTCTGTTGATTCTTGCCGTTACCCAG ATACTGGTGGAAAGCGGCATCATGAAGCGCATTCTGAGCTTTGCCGAAAAATTCATCATCAATACCGTGCGGCAGGCAGA GCTTTCCATTATCGGGGTAACGGTGCTGGCATCCATTCCCATTTCCGCCAACGCTCCTGCAGAATTGCTGGTGGGGCCCA GTCTGGTGCGCCCCATAGGCGAAAAATTCAATCTGGCGCCGGCCCGTCGTGCAAACCTGATGGACTGCGCCGTGTGCACC ATCTTCTTCATTCTTCCCTGGCACATTGTCGTGGCGGCCTGGTATGCGGCTGTGGTTTCCGCCGCGGAATCTTTCGGCCT TGCCGCGCCGTCCATTTCCGCCGCGCTGTACAACCCGTACTCATGGGCATTGTTCGGTGTGCTGCTCTTTTCGGCCATCA CCGGCTGGAACCGCAGATACGCCGAGCCCGACAGTGCACAGACTGAAACGGCAACGGCCTGA
Upstream 100 bases:
>100_bases GGGTGCGGCTTTTTTGCAAGGGAAGAGGGGTTTTCCCGCATTGCAGCACCGCGGGTTACAGCACCGCGACATACAACAGA TACATGAAAAGGGAAGCAGG
Downstream 100 bases:
>100_bases TGTCACCGGATTATGTATAACGAAAGGGAGCTGCGGCTCCCTTTTTTTGTGGTCTTCGGCAGAGCACGCAGAGCTGTTGC GGTCTTCGGACGGGCAGCAG
Product: Na+/H+ antiporter family protein
Products: NA
Alternate protein names: Na+/H+ Antiporter Family Protein; Na+/H+ Antiporter; Na+/H+ Antiporter NhaC-Like Protein; Transporter NhaC Family; Na(+)/H(+) Antiporter Family Protein; Transporter Nhac Family; Na+ Antiporter NhaC; Methionine Transporter NhaC Family; Malate-2H(+)/Na(+)-Lactate Antiporter RBAM; Na+/H+ Antiporter Family; Cation Antiporter; Antiporter; NhaC SodiumHydrogen Antiporter Family Sodium Transporter; Na+H+ Antiporter
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MEQHNMDTRLELYGGIWGGLVPLIVLVGGLVWLSVEEMGGTKPFWACGWLAIVAGLFFAKNKHEYCRAAMRGIGDKTGIV IVTAWLFAGVFGKLMVGGGLVNGLLWLGMTTGAQGAVFTLMVFVAAALFALGTGTSTGTCIALTPVLFPAGCFLGADPAL LATAILSGAAFGDNLAPISDTTIVSAYTQGATMRDVVRSRFPLAMAAATIASAIFLLFGGGGTVKPLPELQAQMDPSGAL MLLALATVVISALMGRHIIESLIYGNIAAAVVGVFNGNLLIGDIFSIPAKRGISTGLIQDGISGVVGAIIFALLILAVTQ ILVESGIMKRILSFAEKFIINTVRQAELSIIGVTVLASIPISANAPAELLVGPSLVRPIGEKFNLAPARRANLMDCAVCT IFFILPWHIVVAAWYAAVVSAAESFGLAAPSISAALYNPYSWALFGVLLFSAITGWNRRYAEPDSAQTETATA
Sequences:
>Translated_473_residues MEQHNMDTRLELYGGIWGGLVPLIVLVGGLVWLSVEEMGGTKPFWACGWLAIVAGLFFAKNKHEYCRAAMRGIGDKTGIV IVTAWLFAGVFGKLMVGGGLVNGLLWLGMTTGAQGAVFTLMVFVAAALFALGTGTSTGTCIALTPVLFPAGCFLGADPAL LATAILSGAAFGDNLAPISDTTIVSAYTQGATMRDVVRSRFPLAMAAATIASAIFLLFGGGGTVKPLPELQAQMDPSGAL MLLALATVVISALMGRHIIESLIYGNIAAAVVGVFNGNLLIGDIFSIPAKRGISTGLIQDGISGVVGAIIFALLILAVTQ ILVESGIMKRILSFAEKFIINTVRQAELSIIGVTVLASIPISANAPAELLVGPSLVRPIGEKFNLAPARRANLMDCAVCT IFFILPWHIVVAAWYAAVVSAAESFGLAAPSISAALYNPYSWALFGVLLFSAITGWNRRYAEPDSAQTETATA >Mature_473_residues MEQHNMDTRLELYGGIWGGLVPLIVLVGGLVWLSVEEMGGTKPFWACGWLAIVAGLFFAKNKHEYCRAAMRGIGDKTGIV IVTAWLFAGVFGKLMVGGGLVNGLLWLGMTTGAQGAVFTLMVFVAAALFALGTGTSTGTCIALTPVLFPAGCFLGADPAL LATAILSGAAFGDNLAPISDTTIVSAYTQGATMRDVVRSRFPLAMAAATIASAIFLLFGGGGTVKPLPELQAQMDPSGAL MLLALATVVISALMGRHIIESLIYGNIAAAVVGVFNGNLLIGDIFSIPAKRGISTGLIQDGISGVVGAIIFALLILAVTQ ILVESGIMKRILSFAEKFIINTVRQAELSIIGVTVLASIPISANAPAELLVGPSLVRPIGEKFNLAPARRANLMDCAVCT IFFILPWHIVVAAWYAAVVSAAESFGLAAPSISAALYNPYSWALFGVLLFSAITGWNRRYAEPDSAQTETATA
Specific function: Unknown
COG id: COG1757
COG function: function code C; Na+/H+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49299; Mature: 49299
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQHNMDTRLELYGGIWGGLVPLIVLVGGLVWLSVEEMGGTKPFWACGWLAIVAGLFFAK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHHHC NKHEYCRAAMRGIGDKTGIVIVTAWLFAGVFGKLMVGGGLVNGLLWLGMTTGAQGAVFTL CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH MVFVAAALFALGTGTSTGTCIALTPVLFPAGCFLGADPALLATAILSGAAFGDNLAPISD HHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC TTIVSAYTQGATMRDVVRSRFPLAMAAATIASAIFLLFGGGGTVKPLPELQAQMDPSGAL CCEEHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHH MLLALATVVISALMGRHIIESLIYGNIAAAVVGVFNGNLLIGDIFSIPAKRGISTGLIQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHCCCCHHHHHH GISGVVGAIIFALLILAVTQILVESGIMKRILSFAEKFIINTVRQAELSIIGVTVLASIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ISANAPAELLVGPSLVRPIGEKFNLAPARRANLMDCAVCTIFFILPWHIVVAAWYAAVVS CCCCCCHHHHCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAESFGLAAPSISAALYNPYSWALFGVLLFSAITGWNRRYAEPDSAQTETATA HHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEQHNMDTRLELYGGIWGGLVPLIVLVGGLVWLSVEEMGGTKPFWACGWLAIVAGLFFAK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHHHC NKHEYCRAAMRGIGDKTGIVIVTAWLFAGVFGKLMVGGGLVNGLLWLGMTTGAQGAVFTL CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH MVFVAAALFALGTGTSTGTCIALTPVLFPAGCFLGADPALLATAILSGAAFGDNLAPISD HHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC TTIVSAYTQGATMRDVVRSRFPLAMAAATIASAIFLLFGGGGTVKPLPELQAQMDPSGAL CCEEHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHH MLLALATVVISALMGRHIIESLIYGNIAAAVVGVFNGNLLIGDIFSIPAKRGISTGLIQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHCCCCHHHHHH GISGVVGAIIFALLILAVTQILVESGIMKRILSFAEKFIINTVRQAELSIIGVTVLASIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ISANAPAELLVGPSLVRPIGEKFNLAPARRANLMDCAVCTIFFILPWHIVVAAWYAAVVS CCCCCCHHHHCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAESFGLAAPSISAALYNPYSWALFGVLLFSAITGWNRRYAEPDSAQTETATA HHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA