| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is argH
Identifier: 78357573
GI number: 78357573
Start: 2548903
End: 2550285
Strand: Reverse
Name: argH
Synonym: Dde_2530
Alternate gene names: 78357573
Gene position: 2550285-2548903 (Counterclockwise)
Preceding gene: 78357574
Following gene: 78357572
Centisome position: 68.37
GC content: 59.36
Gene sequence:
>1383_bases ATGACTGCGGGCAAGCTGTGGGGCGGGCGTTTTCGTGAGCGCACCGCCGGATTGGTGGAGGAATACACCGAGTCCGTTTC GTACGACCGCGCGTTGTACGCTCAGGATATCGCCGGTTCCAAGGCTCATGCCCGTATGCTGGCGCGGCAGGGAGTCATTT CCGCCGGGGATGCCGGACGCATAACCGAAGGGCTGGAACAGATACGCAAAGAGATTGAATCCGGTGAGTTTGTGTGGCGT ACCGAGATGGAAGACGTGCACATGAACATTGAAAGCCGCCTTACCGAACTGGTGGGTGACGCCGGAAGACGCCTGCATAC CGGCCGCAGCCGCAACGATCAGGTGGCCCTTGATTTCCGGCTGTTTGTTTCGGACAGAATCCGCGTATGGAAGAATCTGG TACGGGGTGTCATTGCCGCGCTGACTGCTCAGGCGCATGAACACAAAGACACGCTGCTGCCCGGTTGCACGCATCTGCAG GCGGCTCAGCCTGTCAGTCTTGCCCAGCATCTGCTTGCCTACGCATGGATGTTGCGGCGGGATTACGACCGGCTGGAAGA CTGCGACCGGCGTGTGCGCATATGCCCGCTGGGGGCTGCGGCACTGGCCGGTACGACGTATCCGCTTGATCCGCAGTCCG TTGCCGCCGAACTGGACATGTACGGTGTGTTCAACAACTCCATGGATGCCGTTTCCGACAGGGACTTCGCGCTGGAAGCA CAGTTCTGCGGTTCGCTGATCATGGCGCATATGTCGCGCCTGTGTGAAGAGATAATCCTCTGGGCCAATCCCAACTTCGG GTACATATTTCTGCCTGATGCCTATGCCACCGGTTCCAGCATCATGCCGCAGAAAAAGAACCCCGATGTGGCGGAAATAA TGCGCGGCAAGACCGGTCGCGTCTACGGCGGGCTCATGTCGCTGCTGACCACGCTCAAGGGACTGCCCATGACGTACAAC CGTGACCTGCAGGAAGACAAAGAGCCTTTCATCGACACGGACCGGACGGTTTCGGCTTCGCTGGAAATAATGGCCGGCAT GGTAGAAGCACTGCGCTTCAACACGCGGCGCATGGAAAATGCGCTTCGGGCGGGTTTTCTCAATGCCACCGAACTTGCCG ATTATCTGGTCGGTAAAGGAGTGCCCTTCCGCGACGCGCACCATATCACCGGCAATGCCGTGGCGCTGGCAGAAGACAGG GGCAAAGGGCTTGAAGACCTTACCCTTGAGGAATTCCATTCGGTATCGGACCTGATCGGCGAAGATGTTTTCGCCGTGCT GGATTACCGTGCCGCTGTGGAACGCCGCTGCACACACGGCGGCACCGGACCGGCATCGGTGGCGGCTCAGCTGGCTGCTT TGCAGCAATGGCTTTCCAGCTGA
Upstream 100 bases:
>100_bases GCGACCTTTGAGGAAGATGAAGTTTACAATCAGGCAGACGCCGCCGGCTTTATCCGCCTGAACAGTCTGCGCATTCAGGG TTACGGCAGGAGAAGCTGAC
Downstream 100 bases:
>100_bases GCAGTTCCGGCGCTGCATTAATGTATGTGACAGGCCGTCCGCATGCGGGCGGCCTTTTTGTATGCGCAGTTGACGGTGAG CAGAAGGGACCGGAAGGGGA
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MTAGKLWGGRFRERTAGLVEEYTESVSYDRALYAQDIAGSKAHARMLARQGVISAGDAGRITEGLEQIRKEIESGEFVWR TEMEDVHMNIESRLTELVGDAGRRLHTGRSRNDQVALDFRLFVSDRIRVWKNLVRGVIAALTAQAHEHKDTLLPGCTHLQ AAQPVSLAQHLLAYAWMLRRDYDRLEDCDRRVRICPLGAAALAGTTYPLDPQSVAAELDMYGVFNNSMDAVSDRDFALEA QFCGSLIMAHMSRLCEEIILWANPNFGYIFLPDAYATGSSIMPQKKNPDVAEIMRGKTGRVYGGLMSLLTTLKGLPMTYN RDLQEDKEPFIDTDRTVSASLEIMAGMVEALRFNTRRMENALRAGFLNATELADYLVGKGVPFRDAHHITGNAVALAEDR GKGLEDLTLEEFHSVSDLIGEDVFAVLDYRAAVERRCTHGGTGPASVAAQLAALQQWLSS
Sequences:
>Translated_460_residues MTAGKLWGGRFRERTAGLVEEYTESVSYDRALYAQDIAGSKAHARMLARQGVISAGDAGRITEGLEQIRKEIESGEFVWR TEMEDVHMNIESRLTELVGDAGRRLHTGRSRNDQVALDFRLFVSDRIRVWKNLVRGVIAALTAQAHEHKDTLLPGCTHLQ AAQPVSLAQHLLAYAWMLRRDYDRLEDCDRRVRICPLGAAALAGTTYPLDPQSVAAELDMYGVFNNSMDAVSDRDFALEA QFCGSLIMAHMSRLCEEIILWANPNFGYIFLPDAYATGSSIMPQKKNPDVAEIMRGKTGRVYGGLMSLLTTLKGLPMTYN RDLQEDKEPFIDTDRTVSASLEIMAGMVEALRFNTRRMENALRAGFLNATELADYLVGKGVPFRDAHHITGNAVALAEDR GKGLEDLTLEEFHSVSDLIGEDVFAVLDYRAAVERRCTHGGTGPASVAAQLAALQQWLSS >Mature_459_residues TAGKLWGGRFRERTAGLVEEYTESVSYDRALYAQDIAGSKAHARMLARQGVISAGDAGRITEGLEQIRKEIESGEFVWRT EMEDVHMNIESRLTELVGDAGRRLHTGRSRNDQVALDFRLFVSDRIRVWKNLVRGVIAALTAQAHEHKDTLLPGCTHLQA AQPVSLAQHLLAYAWMLRRDYDRLEDCDRRVRICPLGAAALAGTTYPLDPQSVAAELDMYGVFNNSMDAVSDRDFALEAQ FCGSLIMAHMSRLCEEIILWANPNFGYIFLPDAYATGSSIMPQKKNPDVAEIMRGKTGRVYGGLMSLLTTLKGLPMTYNR DLQEDKEPFIDTDRTVSASLEIMAGMVEALRFNTRRMENALRAGFLNATELADYLVGKGVPFRDAHHITGNAVALAEDRG KGLEDLTLEEFHSVSDLIGEDVFAVLDYRAAVERRCTHGGTGPASVAAQLAALQQWLSS
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily
Homologues:
Organism=Homo sapiens, GI31541964, Length=449, Percent_Identity=43.2071269487751, Blast_Score=378, Evalue=1e-105, Organism=Homo sapiens, GI68303542, Length=449, Percent_Identity=43.2071269487751, Blast_Score=378, Evalue=1e-105, Organism=Homo sapiens, GI68303549, Length=449, Percent_Identity=41.2026726057906, Blast_Score=344, Evalue=1e-94, Organism=Homo sapiens, GI68303547, Length=449, Percent_Identity=40.0890868596882, Blast_Score=339, Evalue=3e-93, Organism=Escherichia coli, GI1790398, Length=451, Percent_Identity=41.9068736141907, Blast_Score=369, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6321806, Length=458, Percent_Identity=44.1048034934498, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI221473854, Length=452, Percent_Identity=41.3716814159292, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI78706858, Length=452, Percent_Identity=41.3716814159292, Blast_Score=343, Evalue=1e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARLY_DESDG (Q30YB9)
Other databases:
- EMBL: CP000112 - RefSeq: YP_389022.1 - ProteinModelPortal: Q30YB9 - SMR: Q30YB9 - STRING: Q30YB9 - GeneID: 3757547 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_2530 - NMPDR: fig|207559.3.peg.3468 - eggNOG: COG0165 - HOGENOM: HBG539632 - OMA: EDIHTVI - ProtClustDB: PRK00855 - BioCyc: DDES207559:DDE_2530-MONOMER - GO: GO:0005737 - HAMAP: MF_00006 - InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - PANTHER: PTHR11444:SF3 - PRINTS: PR00145 - PRINTS: PR00149 - TIGRFAMs: TIGR00838
Pfam domain/function: PF00206 Lyase_1; SSF48557 L-Aspartase-like
EC number: =4.3.2.1
Molecular weight: Translated: 50976; Mature: 50844
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGKLWGGRFRERTAGLVEEYTESVSYDRALYAQDIAGSKAHARMLARQGVISAGDAGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHH ITEGLEQIRKEIESGEFVWRTEMEDVHMNIESRLTELVGDAGRRLHTGRSRNDQVALDFR HHHHHHHHHHHHCCCCEEEEECHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEH LFVSDRIRVWKNLVRGVIAALTAQAHEHKDTLLPGCTHLQAAQPVSLAQHLLAYAWMLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHH DYDRLEDCDRRVRICPLGAAALAGTTYPLDPQSVAAELDMYGVFNNSMDAVSDRDFALEA HHHHHHHHHCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHH QFCGSLIMAHMSRLCEEIILWANPNFGYIFLPDAYATGSSIMPQKKNPDVAEIMRGKTGR HHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCH VYGGLMSLLTTLKGLPMTYNRDLQEDKEPFIDTDRTVSASLEIMAGMVEALRFNTRRMEN HHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALRAGFLNATELADYLVGKGVPFRDAHHITGNAVALAEDRGKGLEDLTLEEFHSVSDLIG HHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH EDVFAVLDYRAAVERRCTHGGTGPASVAAQLAALQQWLSS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAGKLWGGRFRERTAGLVEEYTESVSYDRALYAQDIAGSKAHARMLARQGVISAGDAGR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHH ITEGLEQIRKEIESGEFVWRTEMEDVHMNIESRLTELVGDAGRRLHTGRSRNDQVALDFR HHHHHHHHHHHHCCCCEEEEECHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEH LFVSDRIRVWKNLVRGVIAALTAQAHEHKDTLLPGCTHLQAAQPVSLAQHLLAYAWMLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHH DYDRLEDCDRRVRICPLGAAALAGTTYPLDPQSVAAELDMYGVFNNSMDAVSDRDFALEA HHHHHHHHHCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHH QFCGSLIMAHMSRLCEEIILWANPNFGYIFLPDAYATGSSIMPQKKNPDVAEIMRGKTGR HHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCH VYGGLMSLLTTLKGLPMTYNRDLQEDKEPFIDTDRTVSASLEIMAGMVEALRFNTRRMEN HHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALRAGFLNATELADYLVGKGVPFRDAHHITGNAVALAEDRGKGLEDLTLEEFHSVSDLIG HHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH EDVFAVLDYRAAVERRCTHGGTGPASVAAQLAALQQWLSS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA