| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357498
Identifier: 78357498
GI number: 78357498
Start: 2477726
End: 2479093
Strand: Direct
Name: 78357498
Synonym: Dde_2455
Alternate gene names: NA
Gene position: 2477726-2479093 (Clockwise)
Preceding gene: 78357494
Following gene: 78357499
Centisome position: 66.42
GC content: 59.21
Gene sequence:
>1368_bases ATGCCCCTCTTGCCACAACCGGCTGGCTCGGTTACTACGGGTAGATACACTTTCGCGGCGGCGCAGGTGCATGCACAAAC ACTAACAGTATGCATTGTCTGTAATAACACACTCTATCCGGCCGGTTCAGCAGTCATGAGCAGAGTAAACGTCTCACTAC TTCAATCAGGAATGATCCTATCTGAAGACGTAACGGACAGTAACGGCAGAAAACTGCTATGCGCCGGTGATGCAATTACT GAAAAACACCTGCGGATTCTGAAGATATGGGGTGTTGCCGAAGTTGATGTGGAAGGGATTGAACCCGCCGATGCCGCCCG CAGCGCACTGGACGGTCTTGACCCGCTGCGGGTGGAGGCCGCCGCAGCAAGGGCAACGGCCCGGTTTGCCCTGAATGATC TGCAGTACGAACCGGTCTGCATGCTCATGCAGTGTTCCGTTGCCGCGCTGGCAAAAGGCGCGGACCCCGTCGCCCCGCTG CCCGACTATTCGGTGCTTCCTGCTGCGCCCATGCCCTCCGCCCCGCCGGCGCTGGCCGACATGCTGCGCGACGACACGCG GCTGGGTTCGCTTCCGCCGGTATTCCACCGTCTTGTGGATGTGGTCAACGACCCGCGCAGTTCCGCCACAGACATGGCCG AAGTAATTGCCAACGACACAGACCTGAGCGCACGGCTGCTGCGGCTGGTGAACAGTACTTTTTACGGCCTGCGGGCCAAG GTGGACACCATAACCCGCGCTGTTACCATCATCGGCAGCAACCAGCTCGTTTCGCTTGCCATGGGCGCGGTGATGACAAC TTTTTTCAAGGGTCTGCCCAACAGCATTGTGGACATGCGCTCTTTCTGGGAGCATTCTGTAGCGTGCGGTGTAGCCGCAC GGCTGCTTGCCAGCCTGCACCGCATGCCCAACACCGAACGCTTTTTTGTAGCCGGCCTGCTGCACGACATAGGGCGCCTG GCCGTATACCGGCTGCTGCCGGAGCATTCGCTGTATATGCTGACCGAGTCGCGCCGCAGAGGTATTTCCATGCGGGCCAT GGAACGTGAAGTACTGGGGTTCAGCCACGACAGACTGGGCGGCAGGCTGCTGAAGGAATGGCGCTGCCCCGTGTCGCTGG AGCGCAATGTGGCGCTGCACCATACCCCCGGCAGCGGGCACGGCGGTCTGGAATCGGCCATCATCAATGTGGCCGACATT CTGGCACATACACTGGAATTCGGCACCAGCGGTGAAGTACTTGTCCCACGGCTGGAACAGGCCGTATGGGACGCGCTGGC CCTGCCCGCAGGCACACTGGAACAGGCTGCGGCGCAGATGGATTATCAGGTTCATGAAATTATAAGATTCTTTGAATTGG ATGAATAA
Upstream 100 bases:
>100_bases ACTTGCTGAGTTTCACGCACCGGCACCGCGCCGGATGCTCTGGCACGTCTACCAGAATCCGGAAGAAACCGGAAGAATGG AAAAGCACTGCGCATGAAAA
Downstream 100 bases:
>100_bases CGAAACGCCATTCAGTCAGGCCAACCTCAAGGCCCGTCTGCGCAGTCTGGAGGAACAGGCCAGATTCACGCTTGATGTTC TGGAAATGGCCTCCACTCTG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Signal Transduction Protein; HD Domain-Containing Protein; Metal-Dependent Hydrolase HDOD; Metal-Dependent Phosphoesterase; Diguanylate Cyclase; HDOD Domain Family; Response Regulator Receiver Protein; Histidine Kinase; HD Domain Protein; HD Family Protein; HDIG Domain-Containing Protein; Sensor Histidine Kinase; Chemotaxis Signal Transduction Protein; Adenylate/Guanylate Cyclase; GGDEF Domain-Containing Protein; Phosphohydrolase; Response Regulator; Response Regulator Receiver Modulated Diguanylate Cyclase; Metal Dependent Phosphohydrolase Superfamily Protein; Hdod Domain Family; CheY-Like Response Regulator; Transmembrane GGDEF Family Signalling Protein; HDIG Domain Protein; Signal Transduction Family Protein
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MPLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMILSEDVTDSNGRKLLCAGDAIT EKHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEAAAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPL PDYSVLPAAPMPSAPPALADMLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAK VDTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLHRMPNTERFFVAGLLHDIGRL AVYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLGGRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADI LAHTLEFGTSGEVLVPRLEQAVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE
Sequences:
>Translated_455_residues MPLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMILSEDVTDSNGRKLLCAGDAIT EKHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEAAAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPL PDYSVLPAAPMPSAPPALADMLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAK VDTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLHRMPNTERFFVAGLLHDIGRL AVYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLGGRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADI LAHTLEFGTSGEVLVPRLEQAVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE >Mature_454_residues PLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMILSEDVTDSNGRKLLCAGDAITE KHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEAAAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPLP DYSVLPAAPMPSAPPALADMLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAKV DTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLHRMPNTERFFVAGLLHDIGRLA VYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLGGRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADIL AHTLEFGTSGEVLVPRLEQAVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49260; Mature: 49129
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMIL CCCCCCCCCCCCCCCEEEHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEE SEDVTDSNGRKLLCAGDAITEKHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEA ECCCCCCCCCEEEEECCHHHHHHHEEEEEECEEEECCCCCCCHHHHHHHHCCCCCHHHHH AAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPLPDYSVLPAAPMPSAPPALAD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH MLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAK HHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VDTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLH HHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RMPNTERFFVAGLLHDIGRLAVYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLG HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCHHHHH GRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADILAHTLEFGTSGEVLVPRLEQ HHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH AVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMIL CCCCCCCCCCCCCCEEEHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEE SEDVTDSNGRKLLCAGDAITEKHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEA ECCCCCCCCCEEEEECCHHHHHHHEEEEEECEEEECCCCCCCHHHHHHHHCCCCCHHHHH AAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPLPDYSVLPAAPMPSAPPALAD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH MLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAK HHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VDTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLH HHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RMPNTERFFVAGLLHDIGRLAVYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLG HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCHHHHH GRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADILAHTLEFGTSGEVLVPRLEQ HHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH AVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA