| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357411
Identifier: 78357411
GI number: 78357411
Start: 2389897
End: 2391105
Strand: Direct
Name: 78357411
Synonym: Dde_2368
Alternate gene names: NA
Gene position: 2389897-2391105 (Clockwise)
Preceding gene: 78357410
Following gene: 78357412
Centisome position: 64.07
GC content: 59.8
Gene sequence:
>1209_bases ATGGCTGTCCTGTTGCCGGTCATACTGGGCATCATGGGGCTGGGGCTGGATTCGGGCATGCTGTATCTTTCGCACAGCCG ACTTCAGGCCGCGGTAGATGCCGCCGCTCTGGCCGGCAGTCTTCAGCTGCCCTACGACCCCGCCATGGACAAGGGACTGG TACGTGCGGCTGTGGACGAATACATGCACGCCAATTTTCCTCAGGCCGTGGTGCAGTCCGTGCTGCCCGGGGCGGAGGAA CGCAGTGTCACGGTAAACGCCGAGGCAACCGTAGGCACCATATTCATGGGCGCGCTGGGCATCGGCTCTTCCACGGTACG CGCGCAGGCTTCAGCGGGGTACAACAACCTCGAAGTCGTCTTCGTCATCGATAATTCCGGCTCCATGAAGGGTTCGCCCA TCAATGAAACCAATGCCGCGGCTACCCGTCTGGTGGATCTCATCATGCCCGAAGGCATGGCCACATCGGTTAAAATCGGC CTTGTCCCCTTCCGCGGCAAAGTGCGCATTCCAGCCGATGTCGACGGGCTGCCCTCCGGCTGCCGCAATGCCGACGGCTC ACTGAACGAGGACGGCCTGCTGGATGAATACAAAAAGCCCGAATACCGTTACCCGTACAACGACAGGCTGAGAGTGACTC CGTACTCCTGCTCCAGCATCCCCCTTACCCAGGGGCTGACAGCCGACCGCGCCACCATAACACAGGCCATAGGACGGCAG GATGCACGGGGTGATTCTTCCGGCACCGTCATATCAGAAGGCCTGAAATGGGCACGCCACGTGCTGACCCCCGAGGCGCC TTTCACCGAAGGCTCCTCCGCCAAAGACATGCGCAAGGTGATCATCCTGCTGACAGACGGAGATACCGAAGACGGAAACT GCGGCGGCAACTATTCCGTCTATTACCGGCCCAACAACTACTGGACCAACGCCTACTACGGCATGATGGACATGGATTCG CACTGCGAAGACGGCGGCGTGCTGAATAACGCCATGCTCAGTGAAGCGGCTCTGGCCAAAGATGCCGGCATAGAAATATT CGCCATCCGGTACGGCTCTTCAGACGCTGTGGACCGCAATCTGATGCGGGCAGTCGCGTCCAGCAAGGAAGGCACCGATG ACCACTATTTCGATGCGCCTTCACCGTACGACATTGACGATGTGTTCAAACTGATCGGCCGTCAGCTCGGCTGGAGACTG CTGCGCTGA
Upstream 100 bases:
>100_bases AATGAACCGCTTTACACACTTACTGCGCAGACCAGCATGCCTCTGCCGTAGACTGGGCGGGCAGCTTGCGGCAGGAGCAG AAGGAGCCTCCGCCGCGCTC
Downstream 100 bases:
>100_bases CGCGCAGCAAGGAGACTGTCCATGCACGCATTCCGACTTGTCACAGGCAGGCTGCGGCACGACACGAGCGGACTCAGCTC GCTGGAGCTGGCCCTTACTC
Product: von Willebrand factor, type A
Products: NA
Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MAVLLPVILGIMGLGLDSGMLYLSHSRLQAAVDAAALAGSLQLPYDPAMDKGLVRAAVDEYMHANFPQAVVQSVLPGAEE RSVTVNAEATVGTIFMGALGIGSSTVRAQASAGYNNLEVVFVIDNSGSMKGSPINETNAAATRLVDLIMPEGMATSVKIG LVPFRGKVRIPADVDGLPSGCRNADGSLNEDGLLDEYKKPEYRYPYNDRLRVTPYSCSSIPLTQGLTADRATITQAIGRQ DARGDSSGTVISEGLKWARHVLTPEAPFTEGSSAKDMRKVIILLTDGDTEDGNCGGNYSVYYRPNNYWTNAYYGMMDMDS HCEDGGVLNNAMLSEAALAKDAGIEIFAIRYGSSDAVDRNLMRAVASSKEGTDDHYFDAPSPYDIDDVFKLIGRQLGWRL LR
Sequences:
>Translated_402_residues MAVLLPVILGIMGLGLDSGMLYLSHSRLQAAVDAAALAGSLQLPYDPAMDKGLVRAAVDEYMHANFPQAVVQSVLPGAEE RSVTVNAEATVGTIFMGALGIGSSTVRAQASAGYNNLEVVFVIDNSGSMKGSPINETNAAATRLVDLIMPEGMATSVKIG LVPFRGKVRIPADVDGLPSGCRNADGSLNEDGLLDEYKKPEYRYPYNDRLRVTPYSCSSIPLTQGLTADRATITQAIGRQ DARGDSSGTVISEGLKWARHVLTPEAPFTEGSSAKDMRKVIILLTDGDTEDGNCGGNYSVYYRPNNYWTNAYYGMMDMDS HCEDGGVLNNAMLSEAALAKDAGIEIFAIRYGSSDAVDRNLMRAVASSKEGTDDHYFDAPSPYDIDDVFKLIGRQLGWRL LR >Mature_401_residues AVLLPVILGIMGLGLDSGMLYLSHSRLQAAVDAAALAGSLQLPYDPAMDKGLVRAAVDEYMHANFPQAVVQSVLPGAEER SVTVNAEATVGTIFMGALGIGSSTVRAQASAGYNNLEVVFVIDNSGSMKGSPINETNAAATRLVDLIMPEGMATSVKIGL VPFRGKVRIPADVDGLPSGCRNADGSLNEDGLLDEYKKPEYRYPYNDRLRVTPYSCSSIPLTQGLTADRATITQAIGRQD ARGDSSGTVISEGLKWARHVLTPEAPFTEGSSAKDMRKVIILLTDGDTEDGNCGGNYSVYYRPNNYWTNAYYGMMDMDSH CEDGGVLNNAMLSEAALAKDAGIEIFAIRYGSSDAVDRNLMRAVASSKEGTDDHYFDAPSPYDIDDVFKLIGRQLGWRLL R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43174; Mature: 43043
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLLPVILGIMGLGLDSGMLYLSHSRLQAAVDAAALAGSLQLPYDPAMDKGLVRAAVDE CEEHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH YMHANFPQAVVQSVLPGAEERSVTVNAEATVGTIFMGALGIGSSTVRAQASAGYNNLEVV HHHCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHEEHHCCCCCCEEEE FVIDNSGSMKGSPINETNAAATRLVDLIMPEGMATSVKIGLVPFRGKVRIPADVDGLPSG EEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCCCC CRNADGSLNEDGLLDEYKKPEYRYPYNDRLRVTPYSCSSIPLTQGLTADRATITQAIGRQ CCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC DARGDSSGTVISEGLKWARHVLTPEAPFTEGSSAKDMRKVIILLTDGDTEDGNCGGNYSV CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEE YYRPNNYWTNAYYGMMDMDSHCEDGGVLNNAMLSEAALAKDAGIEIFAIRYGSSDAVDRN EECCCCEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH LMRAVASSKEGTDDHYFDAPSPYDIDDVFKLIGRQLGWRLLR HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVLLPVILGIMGLGLDSGMLYLSHSRLQAAVDAAALAGSLQLPYDPAMDKGLVRAAVDE EEHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH YMHANFPQAVVQSVLPGAEERSVTVNAEATVGTIFMGALGIGSSTVRAQASAGYNNLEVV HHHCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHEEHHCCCCCCEEEE FVIDNSGSMKGSPINETNAAATRLVDLIMPEGMATSVKIGLVPFRGKVRIPADVDGLPSG EEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCCCC CRNADGSLNEDGLLDEYKKPEYRYPYNDRLRVTPYSCSSIPLTQGLTADRATITQAIGRQ CCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC DARGDSSGTVISEGLKWARHVLTPEAPFTEGSSAKDMRKVIILLTDGDTEDGNCGGNYSV CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEE YYRPNNYWTNAYYGMMDMDSHCEDGGVLNNAMLSEAALAKDAGIEIFAIRYGSSDAVDRN EECCCCEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH LMRAVASSKEGTDDHYFDAPSPYDIDDVFKLIGRQLGWRLLR HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA