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The map label for this gene is 78357409

Identifier: 78357409

GI number: 78357409

Start: 2387991

End: 2389430

Strand: Direct

Name: 78357409

Synonym: Dde_2366

Alternate gene names: NA

Gene position: 2387991-2389430 (Clockwise)

Preceding gene: 78357408

Following gene: 78357410

Centisome position: 64.02

GC content: 60.42

Gene sequence:

>1440_bases
ATGAACCGCCTTGCATACATATTTTCAATTGCCGCGGCTGCCATACTGCTGGGCGGCTGCGCTCAGGGAAAAGAAAACAA
CTCCGGCCGTTTTTCGCTCATGCAGCGTTATCACAGCGGACAGCCCCTGATGGCAGAAGAAACCGGGCAGGACACGCGGA
ACAACCATGACAACAGCGCTGAAGCACGTGAGCATCTGGCACGCGGACTCCGCTTTCTGCAGCAGGAAAGAGACGAGCTG
GCTTTTGAACAGTTCAGTCGCGCCGCGTCGCTTGACCCCGCGCTGACTCAGGCCCGTTATCAGCGCGGTCTGCTGCTGCA
CAGCCGGGGCATGCAGCAGGAAGCCATGCAGGAAATGGAAGCGGTACTGGCACTGGAACCTGACCATGCAAAGGCGCATG
AAGCCAGCGGAGCCATTTTTTTCACGGCAGGACTGATGGAAGAAGCACTGGATATGTTCACCAAAGCGGTGAGTCTGGAT
GCCGGACTGGAAAACAGTCATGCGTTCATAGCCGCCATCAGAAACTACCGGGGAGAACATACACAGGCGCTGCAAGCGCT
GCAGGCAGCGCTTGCGCTCTACCCCGCATCCGCCGCGCTGCACAATAACGCTGGCATGACCCTTTCCATGCTGCACCGCG
ATGCCGAAGCCGTCCCCCACTTCCGTCAGGCCATCGGTCTTGGCGCACCCGCGGCGAAAACATGGAACAACATGGGACTG
GCCCTGTGCAGAATGAACCGTCTGGACGAAGCGCTCATAGCATTCCGCAATGCAGGCACCGAGGCTGCCGCATACAATAA
CCTGGGCTACTATCTTTTTCTGCAGAACCGCCACCGCGAGGCAGTCGTGTATCTGGAAAAAGCCATGGAGCTTGAACCGC
GCTACTACGCCCGTGCAGCTGAAAACCTGAAACGCGCCCGACTGGCAGCCCGTTTTGACGCGGCCCCCGCCGCACCTGCC
GCCATACGGCAGATACCGGCGCCCCCCGTCGTACAGCCCGCAGCAACACCGCATAACCGGACACAATCCACCGCGTTGCC
CGTGGCTGTGCCGGCGGTTGCGGCAGATACCGCAAACATGCCCCCCGCAGCCGGTGCCGTTTCCGTCGCAGACTCTCCCG
CCGCCTTTGTGACAAACGCCGCACCGCAGTCTGAGGACAAGGTATGGGCCGTGCATGAAAGTTCGTGGAAAGACGCTCAC
AAGGCACAACAACGTGCCGGCGAACTGCGCAGCATGGGTTTCGATGCCAGAGTGGCCACATTTGCCATCAGACAACACGG
CACATGGCACAGGGTGGTGCTGGGCAGCCATCAGACCATGGAAGAAGCCGACGCCCGCTGTGCAGCGCTTGTACGGCAGG
CGGCATTCGAAAACCTGCGTTCGGTACGTGTTCCTGCAACGCTGATACCTGCCGGCACCCCCGCCGCGCAGCAACTGTAG

Upstream 100 bases:

>100_bases
TTGTATTCTGCATACTTCCGGCTCTTTTTGTCGCCATCATGGGGCCTGCGGGCATCCGTCTGATGCAGGTCTTTTCACAA
ATGGAATAGGAGAGGACACC

Downstream 100 bases:

>100_bases
CCGGTGCCCGCACAGGAGGCCACCATGCCGATATCTTTCACACGCGATGAACGCGGCCTTGCCGCCATCGAGGTAGCCCT
GCTTGTACCGGTGCTGGCAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MNRLAYIFSIAAAAILLGGCAQGKENNSGRFSLMQRYHSGQPLMAEETGQDTRNNHDNSAEAREHLARGLRFLQQERDEL
AFEQFSRAASLDPALTQARYQRGLLLHSRGMQQEAMQEMEAVLALEPDHAKAHEASGAIFFTAGLMEEALDMFTKAVSLD
AGLENSHAFIAAIRNYRGEHTQALQALQAALALYPASAALHNNAGMTLSMLHRDAEAVPHFRQAIGLGAPAAKTWNNMGL
ALCRMNRLDEALIAFRNAGTEAAAYNNLGYYLFLQNRHREAVVYLEKAMELEPRYYARAAENLKRARLAARFDAAPAAPA
AIRQIPAPPVVQPAATPHNRTQSTALPVAVPAVAADTANMPPAAGAVSVADSPAAFVTNAAPQSEDKVWAVHESSWKDAH
KAQQRAGELRSMGFDARVATFAIRQHGTWHRVVLGSHQTMEEADARCAALVRQAAFENLRSVRVPATLIPAGTPAAQQL

Sequences:

>Translated_479_residues
MNRLAYIFSIAAAAILLGGCAQGKENNSGRFSLMQRYHSGQPLMAEETGQDTRNNHDNSAEAREHLARGLRFLQQERDEL
AFEQFSRAASLDPALTQARYQRGLLLHSRGMQQEAMQEMEAVLALEPDHAKAHEASGAIFFTAGLMEEALDMFTKAVSLD
AGLENSHAFIAAIRNYRGEHTQALQALQAALALYPASAALHNNAGMTLSMLHRDAEAVPHFRQAIGLGAPAAKTWNNMGL
ALCRMNRLDEALIAFRNAGTEAAAYNNLGYYLFLQNRHREAVVYLEKAMELEPRYYARAAENLKRARLAARFDAAPAAPA
AIRQIPAPPVVQPAATPHNRTQSTALPVAVPAVAADTANMPPAAGAVSVADSPAAFVTNAAPQSEDKVWAVHESSWKDAH
KAQQRAGELRSMGFDARVATFAIRQHGTWHRVVLGSHQTMEEADARCAALVRQAAFENLRSVRVPATLIPAGTPAAQQL
>Mature_479_residues
MNRLAYIFSIAAAAILLGGCAQGKENNSGRFSLMQRYHSGQPLMAEETGQDTRNNHDNSAEAREHLARGLRFLQQERDEL
AFEQFSRAASLDPALTQARYQRGLLLHSRGMQQEAMQEMEAVLALEPDHAKAHEASGAIFFTAGLMEEALDMFTKAVSLD
AGLENSHAFIAAIRNYRGEHTQALQALQAALALYPASAALHNNAGMTLSMLHRDAEAVPHFRQAIGLGAPAAKTWNNMGL
ALCRMNRLDEALIAFRNAGTEAAAYNNLGYYLFLQNRHREAVVYLEKAMELEPRYYARAAENLKRARLAARFDAAPAAPA
AIRQIPAPPVVQPAATPHNRTQSTALPVAVPAVAADTANMPPAAGAVSVADSPAAFVTNAAPQSEDKVWAVHESSWKDAH
KAQQRAGELRSMGFDARVATFAIRQHGTWHRVVLGSHQTMEEADARCAALVRQAAFENLRSVRVPATLIPAGTPAAQQL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=239, Percent_Identity=26.7782426778243, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI32307148, Length=239, Percent_Identity=26.7782426778243, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=239, Percent_Identity=25.5230125523013, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=239, Percent_Identity=25.5230125523013, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51990; Mature: 51990

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLAYIFSIAAAAILLGGCAQGKENNSGRFSLMQRYHSGQPLMAEETGQDTRNNHDNSA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHH
EAREHLARGLRFLQQERDELAFEQFSRAASLDPALTQARYQRGLLLHSRGMQQEAMQEME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHCCCCHHHHHHHHH
AVLALEPDHAKAHEASGAIFFTAGLMEEALDMFTKAVSLDAGLENSHAFIAAIRNYRGEH
HHHHCCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHH
TQALQALQAALALYPASAALHNNAGMTLSMLHRDAEAVPHFRQAIGLGAPAAKTWNNMGL
HHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCH
ALCRMNRLDEALIAFRNAGTEAAAYNNLGYYLFLQNRHREAVVYLEKAMELEPRYYARAA
HHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHH
ENLKRARLAARFDAAPAAPAAIRQIPAPPVVQPAATPHNRTQSTALPVAVPAVAADTANM
HHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCC
PPAAGAVSVADSPAAFVTNAAPQSEDKVWAVHESSWKDAHKAQQRAGELRSMGFDARVAT
CCCCCEEEECCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHH
FAIRQHGTWHRVVLGSHQTMEEADARCAALVRQAAFENLRSVRVPATLIPAGTPAAQQL
HHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCC
>Mature Secondary Structure
MNRLAYIFSIAAAAILLGGCAQGKENNSGRFSLMQRYHSGQPLMAEETGQDTRNNHDNSA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHH
EAREHLARGLRFLQQERDELAFEQFSRAASLDPALTQARYQRGLLLHSRGMQQEAMQEME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHCCCCHHHHHHHHH
AVLALEPDHAKAHEASGAIFFTAGLMEEALDMFTKAVSLDAGLENSHAFIAAIRNYRGEH
HHHHCCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHH
TQALQALQAALALYPASAALHNNAGMTLSMLHRDAEAVPHFRQAIGLGAPAAKTWNNMGL
HHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCH
ALCRMNRLDEALIAFRNAGTEAAAYNNLGYYLFLQNRHREAVVYLEKAMELEPRYYARAA
HHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHH
ENLKRARLAARFDAAPAAPAAIRQIPAPPVVQPAATPHNRTQSTALPVAVPAVAADTANM
HHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCC
PPAAGAVSVADSPAAFVTNAAPQSEDKVWAVHESSWKDAHKAQQRAGELRSMGFDARVAT
CCCCCEEEECCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHH
FAIRQHGTWHRVVLGSHQTMEEADARCAALVRQAAFENLRSVRVPATLIPAGTPAAQQL
HHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA