| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357373
Identifier: 78357373
GI number: 78357373
Start: 2348114
End: 2349325
Strand: Reverse
Name: 78357373
Synonym: Dde_2330
Alternate gene names: NA
Gene position: 2349325-2348114 (Counterclockwise)
Preceding gene: 78357374
Following gene: 78357372
Centisome position: 62.98
GC content: 60.48
Gene sequence:
>1212_bases ATGCATGTAACGGATAACACGCTGGCAACCATTGAATTCACCCTTTGCTGGAACTGCGACCTTGCCTGCCACACCGAGCG CTACTGGGCACGCAGGGTCAACTTCTGGCGCGATATTTTTCCGCCCCGCATGCGTGAGGCTCTGGAGGGCTGCCGCACCG GAGACAGCATATTGCTGAAATACGCTCCCGGAGAGGCACTGCCGTCATATAACCCCGCCTACGTCTATTCTGTTCCGCAC AATTCTTTCCGTTCCCGGTGCGTACCCGGATATCATCCGGTTCCCCGTGCCGGACGCTATTTCCCGCTGATGTTTTTTGC CTGTCTGCCGGGTGTTTTCGGAGGAGACATGCGCCCTGCCCGTATTGTGCGCATGGATTCGCGCTGCATGGTGGTCGATG CCAACCATCCGCTGGCCGGAAGAGCCTTCAGCATGGAGGCGCGTATTCTTGATCTTGCTGAAAAAACAGGGGAAACAGGC GGGCGCCTGACACACTGGCTGGAAGCTGTGGCGGACGGCGGTCCGGGTATTCAGGCGCGCATCAGCGGTGAACCTGTTGA GGTGCTGTCCGACCCGCATGCGTTCATGCGTTGCGATCAGGTGGACGACCGCGCTTTTTACGATGTGCCGCGCAGTGTGG ACCATATAGACGCGCAGGCTTGCGCCCATCTGCGCGATGAAATAGCCCGCGTTGTTCCGCGTGGGGGCCGCGTGCTGGAC CTCATGACGGGATGGCGTACCCATCTGCCCGCAGGGCATGCCGCTCATGTGACAGGACTGGGACTGGGCGAGGCGGAAAT AAATGACAACCCCGTGCTGGATGAGCGCATTATGCATGACCTTAATGCCGATCCGCAGCTGCCTATGCCGTCAGCGTCTT ATGATGCCGTCATCTGCACACTTTCGGTCGAGTACCTTTTGCAGCCCGTGGCCGTATTGCGCGAAGCCGTGCGGGTGCTC AGGCCCGGCGGTATCATTGTGCTGGCAGTTTCTGACAGGTGGTTCCCCGGCAGAACAATACGCATCTGGCCGGAGCTGCA TGAGTTTGAGCGGGCGGGGTTGATGGTGGACTTGCTGCAGGCGGCGGGCGGTCTGGAATCGTTCCGTACGGTGAGTGTAC GCAACTGGCCGCGTCCGGCCGATGACCGGCATGCAGGCCGGATGGCGCTCAGCGATCCTGTGCACGTTGTTTCGGCAGTG CGCACGGCGTGA
Upstream 100 bases:
>100_bases ATCAGATGGCGGCTCCGCGCCCGTGCGGAGCCGCTTTGTCAAACCGCCTGTATGCGGTTTCAACCTTGAACCCAACTCAG GGTGAGCAAAGAAGGAGTAT
Downstream 100 bases:
>100_bases TCTGTATGCGCAACAATCCAGTATAATTTGCTTTCTATGTTTTCCGGTTGTTTTTCAGCCCGCCGTTACGGCGGGCTTTT TTGCGGCATTGTACACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Domain Family; Methyltransferase
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MHVTDNTLATIEFTLCWNCDLACHTERYWARRVNFWRDIFPPRMREALEGCRTGDSILLKYAPGEALPSYNPAYVYSVPH NSFRSRCVPGYHPVPRAGRYFPLMFFACLPGVFGGDMRPARIVRMDSRCMVVDANHPLAGRAFSMEARILDLAEKTGETG GRLTHWLEAVADGGPGIQARISGEPVEVLSDPHAFMRCDQVDDRAFYDVPRSVDHIDAQACAHLRDEIARVVPRGGRVLD LMTGWRTHLPAGHAAHVTGLGLGEAEINDNPVLDERIMHDLNADPQLPMPSASYDAVICTLSVEYLLQPVAVLREAVRVL RPGGIIVLAVSDRWFPGRTIRIWPELHEFERAGLMVDLLQAAGGLESFRTVSVRNWPRPADDRHAGRMALSDPVHVVSAV RTA
Sequences:
>Translated_403_residues MHVTDNTLATIEFTLCWNCDLACHTERYWARRVNFWRDIFPPRMREALEGCRTGDSILLKYAPGEALPSYNPAYVYSVPH NSFRSRCVPGYHPVPRAGRYFPLMFFACLPGVFGGDMRPARIVRMDSRCMVVDANHPLAGRAFSMEARILDLAEKTGETG GRLTHWLEAVADGGPGIQARISGEPVEVLSDPHAFMRCDQVDDRAFYDVPRSVDHIDAQACAHLRDEIARVVPRGGRVLD LMTGWRTHLPAGHAAHVTGLGLGEAEINDNPVLDERIMHDLNADPQLPMPSASYDAVICTLSVEYLLQPVAVLREAVRVL RPGGIIVLAVSDRWFPGRTIRIWPELHEFERAGLMVDLLQAAGGLESFRTVSVRNWPRPADDRHAGRMALSDPVHVVSAV RTA >Mature_403_residues MHVTDNTLATIEFTLCWNCDLACHTERYWARRVNFWRDIFPPRMREALEGCRTGDSILLKYAPGEALPSYNPAYVYSVPH NSFRSRCVPGYHPVPRAGRYFPLMFFACLPGVFGGDMRPARIVRMDSRCMVVDANHPLAGRAFSMEARILDLAEKTGETG GRLTHWLEAVADGGPGIQARISGEPVEVLSDPHAFMRCDQVDDRAFYDVPRSVDHIDAQACAHLRDEIARVVPRGGRVLD LMTGWRTHLPAGHAAHVTGLGLGEAEINDNPVLDERIMHDLNADPQLPMPSASYDAVICTLSVEYLLQPVAVLREAVRVL RPGGIIVLAVSDRWFPGRTIRIWPELHEFERAGLMVDLLQAAGGLESFRTVSVRNWPRPADDRHAGRMALSDPVHVVSAV RTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44884; Mature: 44884
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVTDNTLATIEFTLCWNCDLACHTERYWARRVNFWRDIFPPRMREALEGCRTGDSILLK CCCCCCEEEEEEEEEEECCCCEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEE YAPGEALPSYNPAYVYSVPHNSFRSRCVPGYHPVPRAGRYFPLMFFACLPGVFGGDMRPA ECCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCE RIVRMDSRCMVVDANHPLAGRAFSMEARILDLAEKTGETGGRLTHWLEAVADGGPGIQAR EEEEECCEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEE ISGEPVEVLSDPHAFMRCDQVDDRAFYDVPRSVDHIDAQACAHLRDEIARVVPRGGRVLD ECCCCHHHHCCCHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE LMTGWRTHLPAGHAAHVTGLGLGEAEINDNPVLDERIMHDLNADPQLPMPSASYDAVICT EHHCHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEE LSVEYLLQPVAVLREAVRVLRPGGIIVLAVSDRWFPGRTIRIWPELHEFERAGLMVDLLQ EEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCHHHHHHHCCHHHHHHH AAGGLESFRTVSVRNWPRPADDRHAGRMALSDPVHVVSAVRTA HHCCHHHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MHVTDNTLATIEFTLCWNCDLACHTERYWARRVNFWRDIFPPRMREALEGCRTGDSILLK CCCCCCEEEEEEEEEEECCCCEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEE YAPGEALPSYNPAYVYSVPHNSFRSRCVPGYHPVPRAGRYFPLMFFACLPGVFGGDMRPA ECCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCE RIVRMDSRCMVVDANHPLAGRAFSMEARILDLAEKTGETGGRLTHWLEAVADGGPGIQAR EEEEECCEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEE ISGEPVEVLSDPHAFMRCDQVDDRAFYDVPRSVDHIDAQACAHLRDEIARVVPRGGRVLD ECCCCHHHHCCCHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE LMTGWRTHLPAGHAAHVTGLGLGEAEINDNPVLDERIMHDLNADPQLPMPSASYDAVICT EHHCHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEE LSVEYLLQPVAVLREAVRVLRPGGIIVLAVSDRWFPGRTIRIWPELHEFERAGLMVDLLQ EEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCHHHHHHHCCHHHHHHH AAGGLESFRTVSVRNWPRPADDRHAGRMALSDPVHVVSAVRTA HHCCHHHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA