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The map label for this gene is yrbE [C]

Identifier: 78357340

GI number: 78357340

Start: 2317362

End: 2318174

Strand: Direct

Name: yrbE [C]

Synonym: Dde_2297

Alternate gene names: 78357340

Gene position: 2317362-2318174 (Clockwise)

Preceding gene: 78357339

Following gene: 78357341

Centisome position: 62.12

GC content: 55.23

Gene sequence:

>813_bases
ATGCAAACAGGCACTTCTGCATCAGGACTGACCGCCCCCTTACAACAGCTCGGGCGCAATACTCTCCGGTTTATCGGAGA
GCTTGGCGCGGTGCTGCTTTTTTTTCTTGATGCAGTCCGTCATATATTCATAGCTTCCCGCCTGTTCCGCAAGGTTGTCC
AGCAGGTGTATTTCATCGGCTCCAAGTCGCTGTTTGTCATTGCCCTTATCGGCATTTTCACCGGCATGGTTCTGGGGCTG
CAGGGCTACTACACTCTGGTCAAATTCGGCTCTGAAGGCTTGCTGGGGGCGGCTGTGGCGCTTACGCTCATCCGTGAACT
GGGGCCGGTGCTTACGGCAATCATGGTCACAGGTCGCGCAGGTTCTGCCATGGCGGCCGAAATCGGCGTCATGCGCATAT
CCGACCAGATAGATGCGCTGGAGGTCATGGACGTCCCGCCCATGGGATACCTTGTCACTCCGCGGCTTCTCGCCTCACTC
ATCGTGTTTCCCATGCTTACGGCGCTGTTCAACACCATAGGCATCATAGGCGGATATCTGACCGGCGTTGTGCTGCTGGG
CATCAACTCCGGTGTCTACTTTTACCGCATAGACAGCAGTGTGGGCTGGTCAGATGTGAGCGGCGGCTTTTTAAAAACCA
TGGTTTTCGCGGTGATAGTGTCCATTATAAGCTGTTATCAGGGCTATTTCACGCATATGCGTAAAGACGGCATGGGGCCG
GAGGGCGTCAGCAACTCCACCACATCGGCCGTGGTGATGTCCTGTGTGCTCGTTCTGGTTTCAGACTATGTCCTGACCTC
ATTCCTGCTGTAG

Upstream 100 bases:

>100_bases
ATTTCTGATTAACAAGCAATCTGAACCCGTTATCAGGTTGACGTAAGAGCGCACTTACATGTAGTTCTATCAACTCCATC
TTTCAGTGAGCGAGAGACAT

Downstream 100 bases:

>100_bases
GATATGCATACCATGAAACAGACACAGAGATGGGACATCGGTCTGCACGACCTGACGCTGGGCTACGGGGACTCCGTGGT
GCTCGACAAGCTGAACGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQTGTSASGLTAPLQQLGRNTLRFIGELGAVLLFFLDAVRHIFIASRLFRKVVQQVYFIGSKSLFVIALIGIFTGMVLGL
QGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSAMAAEIGVMRISDQIDALEVMDVPPMGYLVTPRLLASL
IVFPMLTALFNTIGIIGGYLTGVVLLGINSGVYFYRIDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFTHMRKDGMGP
EGVSNSTTSAVVMSCVLVLVSDYVLTSFLL

Sequences:

>Translated_270_residues
MQTGTSASGLTAPLQQLGRNTLRFIGELGAVLLFFLDAVRHIFIASRLFRKVVQQVYFIGSKSLFVIALIGIFTGMVLGL
QGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSAMAAEIGVMRISDQIDALEVMDVPPMGYLVTPRLLASL
IVFPMLTALFNTIGIIGGYLTGVVLLGINSGVYFYRIDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFTHMRKDGMGP
EGVSNSTTSAVVMSCVLVLVSDYVLTSFLL
>Mature_270_residues
MQTGTSASGLTAPLQQLGRNTLRFIGELGAVLLFFLDAVRHIFIASRLFRKVVQQVYFIGSKSLFVIALIGIFTGMVLGL
QGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSAMAAEIGVMRISDQIDALEVMDVPPMGYLVTPRLLASL
IVFPMLTALFNTIGIIGGYLTGVVLLGINSGVYFYRIDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFTHMRKDGMGP
EGVSNSTTSAVVMSCVLVLVSDYVLTSFLL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=264, Percent_Identity=40.1515151515151, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28840; Mature: 28840

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA