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The map label for this gene is rpmC

Identifier: 78357292

GI number: 78357292

Start: 2278251

End: 2278439

Strand: Reverse

Name: rpmC

Synonym: Dde_2249

Alternate gene names: 78357292

Gene position: 2278439-2278251 (Counterclockwise)

Preceding gene: 78357293

Following gene: 78357291

Centisome position: 61.08

GC content: 51.32

Gene sequence:

>189_bases
ATGAAGGCCGCTGAACTGAGAAAGCTGAGCATTGACGAGCTGAAGGACAAGCTTGCCGAAACCAGAAAGGAACTGTTCGA
TCTGCGTTTCAAGCATGCAACGGCGCAGCTGGAAAAGACTGCCGAAATCCCTGCGGCAAAGCACAACGTTGCTCGCATCC
TCACGATTCTGAAGGAAAAGGGAGCATAA

Upstream 100 bases:

>100_bases
ATCAAAGGGGTAAACCTTGAGCTGGCTCGCGAGGCTCTGACCCGCGCCGCTCATAAGCTCCCCGTGAAGACCACGATCGT
AGTTAGGGAGGGCCTCTAGA

Downstream 100 bases:

>100_bases
CATGTCCGAAGCTATTGAAAACAGAAACGGCAGAGCTCTCGTCGGTGTGGTTGTAAGCGACAAGAACGATAAGACCATTG
TTGTTCGCGTCGAAACCTTG

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MKAAELRKLSIDELKDKLAETRKELFDLRFKHATAQLEKTAEIPAAKHNVARILTILKEKGA

Sequences:

>Translated_62_residues
MKAAELRKLSIDELKDKLAETRKELFDLRFKHATAQLEKTAEIPAAKHNVARILTILKEKGA
>Mature_62_residues
MKAAELRKLSIDELKDKLAETRKELFDLRFKHATAQLEKTAEIPAAKHNVARILTILKEKGA

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_DESDG (Q30Z50)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_388741.1
- ProteinModelPortal:   Q30Z50
- SMR:   Q30Z50
- STRING:   Q30Z50
- GeneID:   3757260
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_2249
- NMPDR:   fig|207559.3.peg.2211
- eggNOG:   COG0255
- HOGENOM:   HBG730819
- OMA:   EHELGIM
- ProtClustDB:   PRK00306
- BioCyc:   DDES207559:DDE_2249-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7042; Mature: 7042

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAELRKLSIDELKDKLAETRKELFDLRFKHATAQLEKTAEIPAAKHNVARILTILKEK
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GA
CC
>Mature Secondary Structure
MKAAELRKLSIDELKDKLAETRKELFDLRFKHATAQLEKTAEIPAAKHNVARILTILKEK
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA