| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is lon [H]
Identifier: 78357261
GI number: 78357261
Start: 2257812
End: 2260271
Strand: Reverse
Name: lon [H]
Synonym: Dde_2218
Alternate gene names: 78357261
Gene position: 2260271-2257812 (Counterclockwise)
Preceding gene: 78357262
Following gene: 78357260
Centisome position: 60.59
GC content: 54.96
Gene sequence:
>2460_bases ATGACAGATTTTGATGCAGAATTTTCCGCAGGAAACCCTGAGGGAATCCAGCTTCCGCTTATGTCTCTGCGAGAGGTGGT CATGTTTCCGCGCTCCATCGTTCCTCTTTTTGTGGGACGTGAAGCGTCTATCAAGGCCATCGACAGCGCCATAGAGCATT ATGGCAAGACTATTTTTCTGGTGGCGCAGCGCGAGCCTGAACTGGAAAAGCCCGGTCCCGAGGATGTGTTTCCTGTGGGA ACCGTCAGTAAGATTCTTCAGATTCTCCGCTTGCCCGACGGCACCATAAAGGTGCTTTTTGAAGGTCTGTACCGCGCCCG CTGGACAGGCGGCGAACTTTCTGTGGAATCTGGTGATTCCGCGTACCCTGTTGTTACGGTGGACCCGCTGGATGACGACG GCGATGCCGGTCCTGAAGCGGATGCTTTGGTGCGGGCCACACATGAGGCTCTGGAAGAATACAGCAAGACCAACAAAAAG CTTGCGCAGGAGGCTCTGGCAGCCATTCTGTCGCTGACATCGCCCGGCAAACTGGCAGATGCCGTCATGCCGCACCTTAA GGTGGAGTATCGTAAAAAGCAGGAAGTGCTGGAAAACACCGACCCCGCTAGCCGTCTGGAAGCCGTGTTTGAAATGCTGC AGGGCGAGATTGCCATATCGTCCATGGAAAAGCGCATCAAAAACCGTGTGAAAAATCAGATGGAGCGCAACCAGCGCGAG TACTACCTGAACGAACAGATAAAGGCCATTCACAAGGAAATGGGGCGCGAAGACGACCCGCAGGCCGAAGTGAACGACCT TGAAGAGCAGCTCAAAGCCAAGGATATGCCTGATGAGGCGCGTGAAAAAGCCTTGCGCGAACTTAAAAAGCTGCGCCAGA TGCCGCCTTCTTCCGCAGAATACACCGTGGTGCGCAACTATGTGGACTGGATAATCGATCTTCCCTGGAATGCGCTGAAA GAAACGACCATCGACATAGAAGAAGCCCGCCGCACGCTGGATAATGACCATTACGGTCTGGAAAAGCCCAAAGAGCGTAT TCTGGAATATCTGGCTGTGCAAAAGCTTGTGAAAAAGCTGAAAGGCCCTATTTTGTGTCTTGTCGGGCCTCCCGGCGTGG GCAAGACATCGCTTGCCCGTTCGGTGGCCACGGCCACAGGACGGGAGTTTGTGCGGCTTTCGTTGGGCGGCGTGCGTGAC GAAGCCGAAATCAGAGGGCACCGCCGTACATATGTGGGGGCACTGCCCGGAAAGATTCTGCAGTCGCTCAAGCGGGTAAA GTTCAACAACCCGCTTTTCTGCCTTGACGAAATAGACAAGATGAGCACCGACTTCCGTGGTGATCCTTCTTCGGCTCTGC TGGAAGTGCTTGATCCCGAGCAGAACGGCACGTTCGGCGACCATTATCTTGATCTGGACTACGACCTTTCGCAGATCTTT TTTATAACCACGGCCAACAGCCTGCATTCCATTCCGCTGCCGCTGCAGGACCGCATGGAGATAATCCGGCTGCCCGGCTA TCTGGAAACGGAAAAGCGCCGTATCGCACGCGATTTTCTGCTGCCCAAGCAGATAGAGCAGCACGGCCTGAAACCGGAAA ATGTCCGGCTTTCAGACAATGCCCTGCTCGACATTATCCGTTCCTACACGCGTGAAGCAGGTGTACGTAACCTTGAGCGC GAAATCGCCACCATCTGCCGCAAGTCAGCCATGCAGCTTGTGGAAAAAGATGACATGGACCGAGCAGTGACTGTTTCCAG ACAGAATCTGGGAACGTTTCTCGGGGTCAAAAAGTACCGGTACGGAGAAAAGGAAAACCAGCCGCAGGTAGGGGTTTCCA CAGGGCTGGCATGGACGGAGCTTGGCGGAGAACTGCTGCTGGTGGAAACTGCCATCATGCCCGGAACAGGCAAGGTATCC ATCACCGGAAAGCTGGGTGATGTGATGACGGAATCTGCCAAGGCGGCTCTTTCCTATGTGCGCTCGCGTTCCGACATGTT CGGTCTGCGTCCTGATTTTCATAAGGAAATAGACATTCATGTGCACGTTCCCGAGGGCGCCACGCCCAAGGACGGCCCTT CGGCGGGTATCACGCTTGCCACGTCGCTTGTATCTGCGCTGCTGGGCGTACCGGTAAGCGACGAACTGGCCATGACCGGT GAAATAACGCTGCGGGGCAGGGTGCTGCCCATCGGCGGACTGCGTGAAAAACTGCTGGCTGCGCACCGCGGGCACATTAC AAAAGTGCTCATTCCCCGTGATAACGAAAAGGATCTGAAGGAAGTGCCTGATGAAATTCTGAAAGGTCTTACCGTGGTTC CTGTTGATCATGTGGATGATGTGCTGCCCCATGCACTGCTGGCGGAAGCCGATGCCATATTCAACGGTATGGAAGGCCAT ACCCCGCTTTCCTGTTCTTTGAGAAAAGGGGCGGAGGTTCCGGCTTCCACTCCGCAGTAG
Upstream 100 bases:
>100_bases CTGCCGGAGAATTGACAATTCCGACAGGGGCGTTAGCTTTTGGTCTGACGTCCCTTTCTTTTTCAACGTGCCGGACGTTG ACCTTCTTCAGGAGGAGTAA
Downstream 100 bases:
>100_bases ACGAAGGCTTTTGCGCACTGTATCAAACGCCCCGCTGAAAAGCGGGGCGTTTCTTTTATGACGTGCGTTGACTTTGCGTT ACGAGAAGAGTAGTTACCGT
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 819; Mature: 818
Protein sequence:
>819_residues MTDFDAEFSAGNPEGIQLPLMSLREVVMFPRSIVPLFVGREASIKAIDSAIEHYGKTIFLVAQREPELEKPGPEDVFPVG TVSKILQILRLPDGTIKVLFEGLYRARWTGGELSVESGDSAYPVVTVDPLDDDGDAGPEADALVRATHEALEEYSKTNKK LAQEALAAILSLTSPGKLADAVMPHLKVEYRKKQEVLENTDPASRLEAVFEMLQGEIAISSMEKRIKNRVKNQMERNQRE YYLNEQIKAIHKEMGREDDPQAEVNDLEEQLKAKDMPDEAREKALRELKKLRQMPPSSAEYTVVRNYVDWIIDLPWNALK ETTIDIEEARRTLDNDHYGLEKPKERILEYLAVQKLVKKLKGPILCLVGPPGVGKTSLARSVATATGREFVRLSLGGVRD EAEIRGHRRTYVGALPGKILQSLKRVKFNNPLFCLDEIDKMSTDFRGDPSSALLEVLDPEQNGTFGDHYLDLDYDLSQIF FITTANSLHSIPLPLQDRMEIIRLPGYLETEKRRIARDFLLPKQIEQHGLKPENVRLSDNALLDIIRSYTREAGVRNLER EIATICRKSAMQLVEKDDMDRAVTVSRQNLGTFLGVKKYRYGEKENQPQVGVSTGLAWTELGGELLLVETAIMPGTGKVS ITGKLGDVMTESAKAALSYVRSRSDMFGLRPDFHKEIDIHVHVPEGATPKDGPSAGITLATSLVSALLGVPVSDELAMTG EITLRGRVLPIGGLREKLLAAHRGHITKVLIPRDNEKDLKEVPDEILKGLTVVPVDHVDDVLPHALLAEADAIFNGMEGH TPLSCSLRKGAEVPASTPQ
Sequences:
>Translated_819_residues MTDFDAEFSAGNPEGIQLPLMSLREVVMFPRSIVPLFVGREASIKAIDSAIEHYGKTIFLVAQREPELEKPGPEDVFPVG TVSKILQILRLPDGTIKVLFEGLYRARWTGGELSVESGDSAYPVVTVDPLDDDGDAGPEADALVRATHEALEEYSKTNKK LAQEALAAILSLTSPGKLADAVMPHLKVEYRKKQEVLENTDPASRLEAVFEMLQGEIAISSMEKRIKNRVKNQMERNQRE YYLNEQIKAIHKEMGREDDPQAEVNDLEEQLKAKDMPDEAREKALRELKKLRQMPPSSAEYTVVRNYVDWIIDLPWNALK ETTIDIEEARRTLDNDHYGLEKPKERILEYLAVQKLVKKLKGPILCLVGPPGVGKTSLARSVATATGREFVRLSLGGVRD EAEIRGHRRTYVGALPGKILQSLKRVKFNNPLFCLDEIDKMSTDFRGDPSSALLEVLDPEQNGTFGDHYLDLDYDLSQIF FITTANSLHSIPLPLQDRMEIIRLPGYLETEKRRIARDFLLPKQIEQHGLKPENVRLSDNALLDIIRSYTREAGVRNLER EIATICRKSAMQLVEKDDMDRAVTVSRQNLGTFLGVKKYRYGEKENQPQVGVSTGLAWTELGGELLLVETAIMPGTGKVS ITGKLGDVMTESAKAALSYVRSRSDMFGLRPDFHKEIDIHVHVPEGATPKDGPSAGITLATSLVSALLGVPVSDELAMTG EITLRGRVLPIGGLREKLLAAHRGHITKVLIPRDNEKDLKEVPDEILKGLTVVPVDHVDDVLPHALLAEADAIFNGMEGH TPLSCSLRKGAEVPASTPQ >Mature_818_residues TDFDAEFSAGNPEGIQLPLMSLREVVMFPRSIVPLFVGREASIKAIDSAIEHYGKTIFLVAQREPELEKPGPEDVFPVGT VSKILQILRLPDGTIKVLFEGLYRARWTGGELSVESGDSAYPVVTVDPLDDDGDAGPEADALVRATHEALEEYSKTNKKL AQEALAAILSLTSPGKLADAVMPHLKVEYRKKQEVLENTDPASRLEAVFEMLQGEIAISSMEKRIKNRVKNQMERNQREY YLNEQIKAIHKEMGREDDPQAEVNDLEEQLKAKDMPDEAREKALRELKKLRQMPPSSAEYTVVRNYVDWIIDLPWNALKE TTIDIEEARRTLDNDHYGLEKPKERILEYLAVQKLVKKLKGPILCLVGPPGVGKTSLARSVATATGREFVRLSLGGVRDE AEIRGHRRTYVGALPGKILQSLKRVKFNNPLFCLDEIDKMSTDFRGDPSSALLEVLDPEQNGTFGDHYLDLDYDLSQIFF ITTANSLHSIPLPLQDRMEIIRLPGYLETEKRRIARDFLLPKQIEQHGLKPENVRLSDNALLDIIRSYTREAGVRNLERE IATICRKSAMQLVEKDDMDRAVTVSRQNLGTFLGVKKYRYGEKENQPQVGVSTGLAWTELGGELLLVETAIMPGTGKVSI TGKLGDVMTESAKAALSYVRSRSDMFGLRPDFHKEIDIHVHVPEGATPKDGPSAGITLATSLVSALLGVPVSDELAMTGE ITLRGRVLPIGGLREKLLAAHRGHITKVLIPRDNEKDLKEVPDEILKGLTVVPVDHVDDVLPHALLAEADAIFNGMEGHT PLSCSLRKGAEVPASTPQ
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=563, Percent_Identity=47.4245115452931, Blast_Score=533, Evalue=1e-151, Organism=Homo sapiens, GI21396489, Length=623, Percent_Identity=42.6966292134831, Blast_Score=509, Evalue=1e-144, Organism=Escherichia coli, GI1786643, Length=776, Percent_Identity=55.0257731958763, Blast_Score=849, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=658, Percent_Identity=40.4255319148936, Blast_Score=488, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17556486, Length=787, Percent_Identity=33.2909783989835, Blast_Score=446, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6319449, Length=712, Percent_Identity=38.061797752809, Blast_Score=490, Evalue=1e-139, Organism=Drosophila melanogaster, GI221513036, Length=624, Percent_Identity=45.3525641025641, Blast_Score=533, Evalue=1e-151, Organism=Drosophila melanogaster, GI24666867, Length=624, Percent_Identity=45.3525641025641, Blast_Score=533, Evalue=1e-151,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 90999; Mature: 90868
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFDAEFSAGNPEGIQLPLMSLREVVMFPRSIVPLFVGREASIKAIDSAIEHYGKTIFL CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEE VAQREPELEKPGPEDVFPVGTVSKILQILRLPDGTIKVLFEGLYRARWTGGELSVESGDS EEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCC AYPVVTVDPLDDDGDAGPEADALVRATHEALEEYSKTNKKLAQEALAAILSLTSPGKLAD CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AVMPHLKVEYRKKQEVLENTDPASRLEAVFEMLQGEIAISSMEKRIKNRVKNQMERNQRE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYLNEQIKAIHKEMGREDDPQAEVNDLEEQLKAKDMPDEAREKALRELKKLRQMPPSSAE HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC YTVVRNYVDWIIDLPWNALKETTIDIEEARRTLDNDHYGLEKPKERILEYLAVQKLVKKL HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH KGPILCLVGPPGVGKTSLARSVATATGREFVRLSLGGVRDEAEIRGHRRTYVGALPGKIL CCCEEEEECCCCCCHHHHHHHHHHHHCHHHEEECCCCCCCHHHHCCCCHHEECCCCHHHH QSLKRVKFNNPLFCLDEIDKMSTDFRGDPSSALLEVLDPEQNGTFGDHYLDLDYDLSQIF HHHHHHCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEEE FITTANSLHSIPLPLQDRMEIIRLPGYLETEKRRIARDFLLPKQIEQHGLKPENVRLSDN EEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECHH ALLDIIRSYTREAGVRNLEREIATICRKSAMQLVEKDDMDRAVTVSRQNLGTFLGVKKYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH YGEKENQPQVGVSTGLAWTELGGELLLVETAIMPGTGKVSITGKLGDVMTESAKAALSYV CCCCCCCCCCCHHCCCHHHHCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHH RSRSDMFGLRPDFHKEIDIHVHVPEGATPKDGPSAGITLATSLVSALLGVPVSDELAMTG HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE EITLRGRVLPIGGLREKLLAAHRGHITKVLIPRDNEKDLKEVPDEILKGLTVVPVDHVDD EEEEEEEEEECCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEECHHHHH VLPHALLAEADAIFNGMEGHTPLSCSLRKGAEVPASTPQ HHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure TDFDAEFSAGNPEGIQLPLMSLREVVMFPRSIVPLFVGREASIKAIDSAIEHYGKTIFL CCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEE VAQREPELEKPGPEDVFPVGTVSKILQILRLPDGTIKVLFEGLYRARWTGGELSVESGDS EEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCC AYPVVTVDPLDDDGDAGPEADALVRATHEALEEYSKTNKKLAQEALAAILSLTSPGKLAD CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AVMPHLKVEYRKKQEVLENTDPASRLEAVFEMLQGEIAISSMEKRIKNRVKNQMERNQRE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYLNEQIKAIHKEMGREDDPQAEVNDLEEQLKAKDMPDEAREKALRELKKLRQMPPSSAE HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC YTVVRNYVDWIIDLPWNALKETTIDIEEARRTLDNDHYGLEKPKERILEYLAVQKLVKKL HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH KGPILCLVGPPGVGKTSLARSVATATGREFVRLSLGGVRDEAEIRGHRRTYVGALPGKIL CCCEEEEECCCCCCHHHHHHHHHHHHCHHHEEECCCCCCCHHHHCCCCHHEECCCCHHHH QSLKRVKFNNPLFCLDEIDKMSTDFRGDPSSALLEVLDPEQNGTFGDHYLDLDYDLSQIF HHHHHHCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEEE FITTANSLHSIPLPLQDRMEIIRLPGYLETEKRRIARDFLLPKQIEQHGLKPENVRLSDN EEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECHH ALLDIIRSYTREAGVRNLEREIATICRKSAMQLVEKDDMDRAVTVSRQNLGTFLGVKKYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH YGEKENQPQVGVSTGLAWTELGGELLLVETAIMPGTGKVSITGKLGDVMTESAKAALSYV CCCCCCCCCCCHHCCCHHHHCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHH RSRSDMFGLRPDFHKEIDIHVHVPEGATPKDGPSAGITLATSLVSALLGVPVSDELAMTG HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE EITLRGRVLPIGGLREKLLAAHRGHITKVLIPRDNEKDLKEVPDEILKGLTVVPVDHVDD EEEEEEEEEECCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEECHHHHH VLPHALLAEADAIFNGMEGHTPLSCSLRKGAEVPASTPQ HHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA